CX671748

Overview
NameCX671748
Unique NameCX671748
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_CRYGA (Nucleolar GTP-binding protein 2 OS=Cryptococcus gattii GN=NOG2 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.213e-26
Identity = 76/209 (36.36%), Postives = 110/209 (52.63%), Query Frame = 2
Query:  197 SGKPKHSLDANRTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQHE-FQS--KELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQ--ARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDL----------VRHTMFEKGQSKRIWG 775
            SG         R  G++  R A +  R+ M    +  RDR GK+++   FQ   KE    R++PDRRWFGNTR ++Q  L+ FR  L+   +  Y+V+L+  KLP  LL D  K   +R H+++TEPF D FGPK +RKRP+L     E L + +  +  A E     + +AE  + +G  DL           R  ++ KG S+RIWG
Sbjct:   22 SGTSTGEFTLKRVKGENFYRDAKSAARVKMLNGGKAVRDRDGKIVEAAAFQKGEKEAEPGRVKPDRRWFGNTRVISQSALDHFRTALKEQKADPYSVLLKRNKLPMGLLQDDTKDSGSRPHIVETEPFGDTFGPKAQRKRPRLDIGSIEELGESSAAAATAAE-----AATAES-QANGTADLADIYHPTTSTAREPIYAKGTSRRIWG 224          
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_NEUCR (Nucleolar GTP-binding protein 2 OS=Neurospora crassa GN=nog-2 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 73/218 (33.49%), Postives = 116/218 (53.21%), Query Frame = 2
Query:  179 EKKVNVSGKPKHSLDANRTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQA-RVH----LLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVE--GDGFRD-----------LVRHTMFEKGQSKRIW 772
            +++  V+G PK         G++  RSA  ++ LN+ K  +  R+++GKV++   +QS+++P   I+P+RRWF NTR ++Q  L  FRE +       Y+V+L+  KLP SL+ D  K A + H     +++EPF   FGPK +RKRPKL  +    L + ++ S D ++ + +      G    G G  D             +  +F KGQSKRIW
Sbjct:   12 QRQGKVTGDPK-------VKGENFYRSAKKIKALNVLKEGKAIRNKEGKVVKAASYQSRDVPTAVIEPNRRWFNNTRVISQDTLTSFREAIAEKDKDPYSVLLKSNKLPMSLIRDGPKDALKKHQAKMTIESEPFSQTFGPKAQRKRPKLSFNTIGDLTEHSEKSMDTYQARLEEIKLLSGASGYGGGLADDDVQEEDFSVATAKEAIFTKGQSKRIW 222          
The following BLAST results are available for this feature:
BLAST of CX671748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
NOG2_CRYGA2.213e-2636.36Nucleolar GTP-binding protein 2 OS=Cryptococcus ga... [more]
NOG2_NEUCR4.931e-2633.49Nucleolar GTP-binding protein 2 OS=Neurospora cras... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12H09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12H09-P18-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671748 ID=CX671748; Name=CX671748; organism=Citrus sinensis; type=EST; length=777bp
GAAAAACCCTAGCCCCAAATTAGCAAAGCAAGCCGCCCACTTCTGCAAAC
TCAGAACTCAAGTTGGCGCCACCCTTACATCAAGAGCTGAAAGCCCCAAT
TTACTCAGCCTTCTGTCATCCTCCTTACAGGAATTCGCCGCCTTTACTCA
CCGGTGAACGAAAATGGCAAAGACGAAAGAGAAGAAAGTGAATGTGTCGG
GCAAGCCGAAACACTCGCTGGACGCGAATCGTACGGACGGGAAAAGCGGT
AGCCGAAGTGCGTCGACAGTACGCCGCCTCAATATGTACAAGACAAGGCC
GAAACGCGACCGTAAGGGCAAAGTTTTGCAGCACGAGTTTCAGTCGAAGG
AGTTGCCCAACACTCGCATTCAGCCAGACCGCCGCTGGTTCGGGAACACA
CGTTGTGTGAATCAGAAGCAGCTCGAATTCTTTCGTGAAGAGCTACAGAG
CCATATGTCTAGTAGCTATAATGTTATCTTGAGAGAGAAAAAACTGCCCT
TTTCTCTCCTAAATGATCACCAGAAGCAAGCTAGAGTTCACCTCCTTGAT
ACCGAGCCTTTTCAAGATGCCTTTGGACCTAAGGGAAAGAGGAAGAGGCC
AAAGCTATTGGCATCAGATTACGAATCTTTAGTTAAGAGAGCTGATGGTT
CTCAAGATGCCTTTGAGCAGAAGAATGATGCTAGTACATCAGCAGAAGGA
GTTGAGGGAGATGGATTTAGGGATCTTGTTCGGCATACAATGTTTGAGAA
GGGTCAAAGTAAACGTATATGGGGAGA
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