CX671747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_SCHPO (Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe GN=nog2 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.456e-28 Identity = 59/114 (51.75%), Postives = 82/114 (71.93%), Query Frame = -2 Query: 538 YITLTKRIFLIDCPGVVY-QNKDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPP 876 Y+ L KRIFLIDCPG+V + DS+ +++LKGVVRV N+ + +I VL R K +HL+R Y+I W D +FL +L K G+LL+GGEPD + AKM+L+D+ RGKIP+F+ P Sbjct: 350 YVALMKRIFLIDCPGIVPPSSNDSDAELLLKGVVRVENVSNPEAYIPTVLSRCKVKHLERTYEISGWNDSTEFLAKLAKKGGRLLKGGEPDEASVAKMVLNDFMRGKIPWFIGP 463
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_PNECA (Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.316e-24 Identity = 52/123 (42.28%), Postives = 83/123 (67.48%), Query Frame = -2 Query: 514 YITLTKRIFLIDCPGVVYQNK-DSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWV-DENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQEDDSS 876 Y+ +T +IF+IDCPG+V N DSET+I++KG +R+ + + ++I +L + +HL+R Y+I W D F+ L + TGKLL+GGE D + AKM+++D+ RGKIP+F+ P + D S+ Sbjct: 332 YVRMTSKIFMIDCPGIVPPNSNDSETEIIIKGALRIEKVSNPEQYIHAILNLCETKHLERTYQISGWENDSTKFIELLARKTGKLLKGGEVDESSIAKMVINDFIRGKIPWFIAPAQENDPSN 454
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: GNL3_CAEEL (Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis elegans GN=nst-1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.948e-16 Identity = 46/117 (39.32%), Postives = 65/117 (55.56%), Query Frame = -2 Query: 529 ITLTKRIFLIDCPGVVY-QNKDSET-DIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQ 873 + L K I LID PGV+ KD + ++ LK +RV NL D + +L+R KE + Y + D+ + FL QL + GKL RG PD AAK +L+DW GK+ ++ PP Q Sbjct: 300 VELDKNIRLIDSPGVILVSQKDLDPIEVALKNAIRVDNLLDPIAPVHAILRRCSKETIMLHYNLADFNSVDQFLAQLARRIGKLRRGARPDVNAAAKRVLNDWNTGKLRYYTHPPEQ 416
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: GNL3_DROME (Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila melanogaster GN=ns1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.675e-15 Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = -2 Query: 478 ITLTKRIFLIDCPGVVYQNKDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQEDDSSAEPNVCGLNEEA 873 + L +I LIDCPG+V+ + + VLK RV +++D VLKR KE+ Y I ++ +F + GK L+ G PD + AA+ +L+DW GKI + PP ++ S + ++ EA Sbjct: 308 VELDSKIKLIDCPGIVFTSGGENSHAVLKNAQRVGDVKDPFTIAESVLKRASKEYFCTMYDITNYDTFEEFFAKKAARMGKFLKKGVPDVVAAARSVLNDWNTGKIKYCTQPPEVQEGQSVHISASIVHSEA 439
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: GNL3_DICDI (Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium discoideum GN=gnl3 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.307e-12 Identity = 34/113 (30.09%), Postives = 61/113 (53.98%), Query Frame = -2 Query: 535 ITLTKRIFLIDCPGVVYQNKDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPP 873 + L K + L+D PG+V + + +I+L+ VV++ + D + +L R ++ + Y+I + DFL Q+ K+++GG D + A ++ DW GKIPF+ PP Sbjct: 304 VHLDKNVKLLDSPGIVPIKGNVDENIILRNVVKLEKVLDPIAPVDAILSRCSQKQILDIYEIAQYQSTTDFLTQVAAKRKKIVKGGIADLRSTAISVIRDWTGGKIPFYTQPP 416
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: GNL3L_HUMAN (Guanine nucleotide-binding protein-like 3-like protein OS=Homo sapiens GN=GNL3L PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.219e-11 Identity = 47/177 (26.55%), Postives = 75/177 (42.37%), Query Frame = -2 Query: 421 ITLTKRIFLIDCPGVVYQNKDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPP--------------------------HQEDDSSAEPNVCGLNEEAVGDNNQASAALKVIASVMS 873 + L K I L+D PG+V +SE +L+ V V L D + +L+R E + Y + + FL + GK +GG AAK +L DW GKI F++PPP Q ++ + E G ++E +GD + +K++ S M+ Sbjct: 293 VYLDKFIRLLDAPGIV-PGPNSEVGTILRNCVHVQKLADPVTPVETILQRCNLEEISNYYGVSGFQTTEHFLTAVAHRLGKKKKGGLYSQEQAAKAVLADWVSGKISFYIPPPATHTLPTHLSAEIVKEMTEVFDIEDTEQANEDTMECLATGESDELLGDTDPLEMEIKLLHSPMT 468 The following BLAST results are available for this feature:
BLAST of CX671747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671747 ID=CX671747; Name=CX671747; organism=Citrus sinensis; type=EST; length=877bpback to top |