CX671740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.321e-46 Identity = 90/214 (42.06%), Postives = 132/214 (61.68%), Query Frame = -3 Query: 205 PAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 846 P FTGS++ +D +PLA A+A G W PD++AL V A++G ++ GG H+ S LA N++ +S FN Y DTGL G + V +DD+ + + + +L +E++V R +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA V+ V +++ YD+ A+A GPI+ LPDYN R +W R+ Sbjct: 267 PCRFTGSQICHREDGLPLAHVAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF 480
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPB_DICDI (Mitochondrial-processing peptidase subunit beta OS=Dictyostelium discoideum GN=mppB PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.118e-45 Identity = 90/210 (42.86%), Postives = 133/210 (63.33%), Query Frame = -3 Query: 208 FTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 837 F GSE+R+ DD+ PL FAVA WTDPD L ++Q M+G+WN+ GK++ S L + V ++AES F T Y+DTGLFG Y V +P+ +DDL ++ E ++A ++ +V R + +L ++ L+ DGTS V E IGRQ+LT GRR+ E++ RI+ + + V+RVA+ + D A+ A+GPI PDYN+ + TYWNR Sbjct: 259 FIGSELRVRDDEQPLIHFAVAVRALPWTDPDYFVLELIQTMIGNWNRGIAAGKNIASNLGEIVATEDLAESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQRIATSCNKNEVERNKQKLLATTLMQYDGTSKVCEGIGRQILTLGRRLSPFEVYTRINEITVADVQRVASTLLRDVSPAVTAIGPIANYPDYNFVKGWTYWNR 468
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPB_NEUCR (Mitochondrial-processing peptidase subunit beta OS=Neurospora crassa GN=pep PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.248e-45 Identity = 98/200 (49.00%), Postives = 139/200 (69.50%), Query Frame = -3 Query: 241 FTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVA-KPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDY 837 F GS++RI DD IP A A+A G SW+D D +V QA++G+++K H GS+L+ V +++A S M+F+T+Y DTGL+G+Y V K D +DDL + + E T+L VSEA+V RA+ QLK+S+LL +DGT+ VAEDIGRQ++T GRR+ AE+ ID+V A V AN+ I+D+DIAI+A+G I+GL DY Sbjct: 265 FIGSDIRIRDDTIPTANIAIAVEGVSWSDDDYFTGLVTQAIVGNYDKALGNAPHQGSKLSGFVHKHDLATSFMSFSTSYSDTGLWGIYLVTDKLDRVDDLVHFSLREWTRLCSNVSEAEVERAKAQLKASILLSLDGTTAVAEDIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQDIAISAVGSIEGLFDY 464
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPB_LENED (Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes GN=mppB PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.134e-44 Identity = 86/204 (42.16%), Postives = 135/204 (66.18%), Query Frame = -3 Query: 229 FTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDC-LDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFR 837 F GSE RI DD++P A A+A G W+ PD +MVMQ++ G+W+++ + S L+ + N +A S M+F+T+Y DTGL+G+Y V++ LDD + + E T+++ +E +V RA++QLK+ LLL +DGT+ VAEDIGRQ++T G+R+ A++ +D+V +KRVA ++++D+D A+AA G I GL DY R Sbjct: 255 FVGSEARIRDDELPTAHVAIAVEGVGWSSPDYFPMMVMQSIFGNWDRSLGASSLLSSRLSHIISSNSLANSFMSFSTSYSDTGLWGIYLVSENLMNLDDTLHFTLKEWTRMSIAPTEGEVERAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVAQKYLWDKDFALAAFGNIDGLKDYGRIR 458
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPB_SCHPO (Probable mitochondrial-processing peptidase subunit beta OS=Schizosaccharomyces pombe GN=qcr1 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.858e-43 Identity = 92/212 (43.40%), Postives = 134/212 (63.21%), Query Frame = -3 Query: 205 FTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKP-DCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 837 F GSE+R DDD P A A+A G SW PD +VMQA++G+W++ H+ S L+ V +++A S M+F+T+Y DTGL+G+Y V + +DDL + + +L + A+V RA+ QL++SLLL +D T+ +AEDIGRQLLT GRR+ E+ RI + V RVA+ I+D+DIA++A+G I+GL DYN R NR+ Sbjct: 247 FVGSEIRARDDDSPTANIAIAVEGMSWKHPDYFTALVMQAIIGNWDRAMGASPHLSSRLSTIVQQHQLANSFMSFSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWARLTV-ATRAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEMIWDKDIAVSAVGSIEGLLDYNRIRSSISMNRW 457
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: UCR1_CAEEL (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis elegans GN=ucr-1 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 4.719e-28 Identity = 69/213 (32.39%), Postives = 111/213 (52.11%), Query Frame = -3 Query: 208 FTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDD---LAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRTYWNR 837 FTGSE R +D++P A A G + D++AL + +G W+ + S L Q++G + ++ FN NYKDTGLFG+Y VA L+D + ++ +E LA +E +V A+NQ +++L +++ + A ++LL G +EL A+I VDA V+ +R +YDRD+A +G + P+Y R W R Sbjct: 258 FTGSEYRYRNDNVPHMYAAFAVEGVGYAHKDALALQIANQFIGQWDVTHATSRTAASRLVQKIGHDHGVHNLQHFNINYKDTGLFGIYFVADAHDLNDTSGIMKSVAHEWKHLASAATEEEVAMAKNQFRTNLYQNLETNTQKAGFNAKELLYTGNLRQLSELEAQIQKVDAGAVREAISRHVYDRDLAAVGVGRTEAFPNYALTRAGMSWWR 470
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPB_YEAST (Mitochondrial-processing peptidase subunit beta OS=Saccharomyces cerevisiae GN=MAS1 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.382e-26 Identity = 66/212 (31.13%), Postives = 121/212 (57.08%), Query Frame = -3 Query: 223 IFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGIN-EIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTK-----LAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRR 840 +F E I ++ +P A+A G SW+ PD + QA++G+W++ G + S LA N +A S M+F+T+Y D+GL+G+Y V D + I+ E K + ++S+A+V RA+ QLK++LLL +DG++ + EDIGRQ++T G+R+ E+F ++D + + AN + ++ +++ A+G +P+ ++ + Sbjct: 250 VFCRGERFIKENTLPTTHIAIALEGVSWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYADSGLWGMYIVT--DSNEHNVQLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRLQNKPVSMVALGNTSTVPNVSYIEEK 459
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: QCR1_YEAST (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Saccharomyces cerevisiae GN=COR1 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.619e-22 Identity = 63/204 (30.88%), Postives = 107/204 (52.45%), Query Frame = -3 Query: 241 AIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGV-YAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPV--AEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDY 843 A F GSEVR+ DD +P A ++A G P+ + + GS+N + G +L + ++ ++ F+ +YKD+GL+G A +DDL + + + +L V++ +V RA++ LK L + +PV A +G ++L G ++ E F +ID++ VK A + ++D+DIAIA G I+GL DY Sbjct: 242 AAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDY 445
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: QCR1_EUGGR (Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.245e-20 Identity = 62/201 (30.85%), Postives = 104/201 (51.74%), Query Frame = -3 Query: 298 FTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELA----------------QRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCL-----DDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFI 837 F G + R + PL AVAF + PD+I + V++ +LGS++++ + A + G N I S+ AF Y D GL G YA+A+P +++ + M E +++ +SE + RA+NQLK +L +DGT+ +A+DIGRQ+L++G R+P A F ++D++ + RV R + Sbjct: 246 FLGGDKRETNQLNPLTHVAVAFQTPGISHPDAIKIKVLEQLLGSYSRDKGEAAYSCFARAIVMDFYDPKVGQFFRPNKAGHNPI-HSLNAFWAPYSDVGLLGFYAIAEPGKSYGHEWENILHYAMRELIRVSRNISEEEFERAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVPLASFFEQLDAISREDLIRVGPRVL 445
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA_NEUCR (Mitochondrial-processing peptidase subunit alpha OS=Neurospora crassa GN=mpp PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.066e-19 Identity = 69/199 (34.67%), Postives = 104/199 (52.26%), Query Frame = -3 Query: 298 PAIFTGSEVRIIDDDIPL-------AQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGG--KHMGSELAQRVGINEIA--ESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYE----TTKLAYR-VSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFI 846 PA +TG + + PL +AF G + +D D AL +Q +LG S GG K M S L V +N+ ES +AFN +Y D+GLFG+ A P + + E TT Y + E +V+RA+NQL+SSLL++++ ED+GRQ+ +GR+IP E+ RI+ + ++RVA R + Sbjct: 332 PAHYTGGFLTLPSQPPPLNPNLPTFTHIQLAFEGLAISDDDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTNV-LNQHGWVESCVAFNHSYTDSGLFGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAKNQLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVAKRVV 529 The following BLAST results are available for this feature:
BLAST of CX671740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671740 ID=CX671740; Name=CX671740; organism=Citrus sinensis; type=EST; length=854bpback to top |