CX671740

Overview
NameCX671740
Unique NameCX671740
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA_YEAST (Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces cerevisiae GN=MAS2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.920e-19
Identity = 65/191 (34.03%), Postives = 103/191 (53.93%), Query Frame = -3
Query:  310 AIFTGSEVRI----IDDDIP-LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGG--KHMGSELAQRVGINE--IAESMMAFNTNYKDTGLFGV----YAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVA 843
            A +TG E  I    +  ++P L    + F G     PD  AL  +Q +LG     S GG  K M S L   V +N+    E+ +AFN +Y D+G+FG+       A P  ++ +A  +         R++E +V+RA+NQLKSSLL++++      ED+GRQ+L +GR+IP  E+ ++I+ +    + RVA
Sbjct:  235 AQYTGGESCIPPAPVFGNLPELFHIQIGFEGLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHV-LNQYYFVENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVA 424          
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.782e-18
Identity = 64/209 (30.62%), Postives = 104/209 (49.76%), Query Frame = -3
Query:  238 IFTGSEVRIIDDDIPLAQFAVAFA--GASWTDPDSIALMVMQAMLGSWNKNSVGG--KHMGSELAQRVGINEIAE--SMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY--RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYN 840
            ++ G + R    D  +  FA+AF   G   ++ +S+ L V+Q ++G     S GG  K M S L  RV +N+  +  +  AF++ Y +TGLFG+      D         + E   +A    V +  + RA+   KS++L++++     +EDIGRQLLTYG R P       ID+V A  +  V  + I    + +A+ G +  LP Y+
Sbjct:  290 VYVGGDYRC-QADAEMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRV-LNQYPQIHAFSAFSSIYNNTGLFGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQATKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLI-SSPLTMASYGDVLSLPSYD 495          
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA_SCHPO (Probable mitochondrial-processing peptidase subunit alpha OS=Schizosaccharomyces pombe GN=mas2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.782e-18
Identity = 64/196 (32.65%), Postives = 97/196 (49.49%), Query Frame = -3
Query:  298 PAIFTGSEVRIIDDDIPLAQF-------AVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEI-----AESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTY-GRRIPFAELFARIDSVDASTVKRVANRFI 846
            P+ +TG  + I   + P   +        +A  G   TDPD  AL  +Q +LG     S GG   G  +  R+ +N +      E+ MAFN +Y D+GLFG++     D     A  I+ E       V+  +  RA+NQLKSSLL++++      ED+GRQ+ T  G  I   E+  +ID++  S + RVA R +
Sbjct:  262 PSHYTGGFMGIKKSEAPPVPYQQEFTHVVIAMEGLPVTDPDIYALACLQFLLGGGGSFSAGGP--GKGMYSRLYLNVLNQYPWVETCMAFNHSYTDSGLFGMFVTILDDAAHLAAPLIIRELCNTVLSVTSEETERAKNQLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPKEMIEKIDALTPSDLSRVARRVL 455          
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA1_ARATH (Probable mitochondrial-processing peptidase subunit alpha-1 OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.197e-17
Identity = 63/191 (32.98%), Postives = 102/191 (53.40%), Query Frame = -3
Query:  238 FAVAFAGASWT-DPDSIALMVMQAMLGSWNKNSVGG--KHMGSELAQRVGINEIAE--SMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAN--RFIYDRDIAIAAMGPIQGLPDYN 786
            FAVAF    W  + +++   V+Q ++G     S GG  K M S L +RV +NE  E  S  AF + + DTGLFG+Y  + P            E   +A  +V++A + RA+   KS++L++++     AEDIGRQ+LTYG R P  +    + SVD  T+K +A+    +  + + + + G +  +P Y+
Sbjct:  310 FAVAFEVPGWNNEKEAVTATVLQMLMGGGGSFSAGGPGKGMHSWLYRRV-LNEYQEVQSCTAFTSIFNDTGLFGIYGCSSPQFAAKAIELAAKELKDVAGGKVNQAHLDRAKAATKSAVLMNLESRMIAAEDIGRQILTYGERKPVDQF---LKSVDQLTLKDIADFTSKVISKPLTMGSFGDVLAVPSYD 496          
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA_BLAEM (Mitochondrial-processing peptidase subunit alpha OS=Blastocladiella emersonii PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.230e-16
Identity = 62/188 (32.98%), Postives = 87/188 (46.28%), Query Frame = -3
Query:  244 LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGG--KHMGSELAQRVGINEIA--ESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPD 795
            L    VAF    +T PD   +  +Q ++G     S GG  K M S L   V +N     ES  AF   Y  T LFG+ A   P     L   +  E   +A  +S+ +V RA+NQLKSSLL++++      EDIGRQ+L   +R+   EL   I +V    + RVA   +      +A    +  L D
Sbjct:  259 LTHVQVAFPVPPFTHPDMFPVSTLQVLMGGGGAFSAGGPGKGMYSRLYTNV-LNRYRWMESCAAFQHAYSSTSLFGISASCVPSFNPHLCNVLAGEFVHMARNLSDEEVARAKNQLKSSLLMNLESQVITVEDIGRQVLAQNQRLEPLELVNNISAVTRDDLVRVAEALVAKPPTMVAVGEDLTKLTD 445          
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA2_ARATH (Probable mitochondrial-processing peptidase subunit alpha-2 OS=Arabidopsis thaliana GN=At3g16480 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.574e-15
Identity = 55/193 (28.50%), Postives = 98/193 (50.78%), Query Frame = -3
Query:  223 FAVAFAGASWT-DPDSIALMVMQAMLGSWNKNSVGG--KHMGSELAQRV-GINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRR 786
            FA+AF    W  + ++I   V+Q ++G     S GG  K M S L  R+   ++  +S  AF + + +TGLFG+Y    P+        +  E   +A  +V++  + RA+   KS++L++++     AEDIGRQ+LTYG R P  +    +D +    +    ++ I  + + +A  G +  +P Y+   +R
Sbjct:  306 FALAFEVPGWNNEKEAIIATVLQMLMGGGGSFSAGGPGKGMHSWLYLRLLNQHQQFQSCTAFTSVFNNTGLFGIYGCTSPEFASQGIELVASEMNAVADGKVNQKHLDRAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSKVI-TKPLTMATFGDVLNVPSYDSVSKR 497          
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA_MOUSE (Mitochondrial-processing peptidase subunit alpha OS=Mus musculus GN=Pmpca PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.581e-15
Identity = 60/203 (29.56%), Postives = 101/203 (49.75%), Query Frame = -3
Query:  241 SEVRIIDDDIP-LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDY 828
            S V +    IP L    V     S+ + D I   V+  M+G     S GG   G  +  R+ +N +      +N      +Y+DTGL  ++A A P  + ++   I  E   +   V   ++ RA+ QL S L+++++    + ED+GRQ+L T+ R++P  EL   I +V    +KRVA++ +  +  A+AA+G +  LP Y
Sbjct:  304 SNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGP--GKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPH-ELCTLIRNVKPEDIKRVASKMLRGKP-AVAALGDLTDLPTY 502          
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA_PONAB (Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii GN=PMPCA PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.983e-15
Identity = 61/203 (30.05%), Postives = 101/203 (49.75%), Query Frame = -3
Query:  241 SEVRIIDDDIP-LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDY 828
            S V +    IP L    V     S+ + D I   V+  M+G     S GG   G  +  R+ +N +      +N      +Y+DTGL  ++A A P  + ++   I  E   ++  V   ++ RA+ QL S L+++++    + ED+GRQ+L T  R++P  EL   I +V    VKRVA++ +  +  A+AA+G +  LP Y
Sbjct:  305 SNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGP--GKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMSGTVDAVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPH-ELCTLIRNVKPEDVKRVASKMLRGKP-AVAALGDLTDLPTY 503          
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA_HUMAN (Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens GN=PMPCA PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.814e-15
Identity = 61/203 (30.05%), Postives = 100/203 (49.26%), Query Frame = -3
Query:  241 SEVRIIDDDIP-LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDY 828
            S V +    IP L    V     S+ + D I   V+  M+G     S GG   G  +  R+ +N +      +N      +Y+DTGL  ++A A P  + ++   I  E   +   V   ++ RA+ QL S L+++++    + ED+GRQ+L T  R++P  EL   I +V    VKRVA++ +  +  A+AA+G +  LP Y
Sbjct:  305 SNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGP--GKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPH-ELCTLIRNVKPEDVKRVASKMLRGKP-AVAALGDLTDLPTY 503          
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA_BOVIN (Mitochondrial-processing peptidase subunit alpha OS=Bos taurus GN=PMPCA PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.814e-15
Identity = 56/191 (29.32%), Postives = 96/191 (50.26%), Query Frame = -3
Query:  241 LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDY 795
            L    +     S+ + D I   V+  M+G     S GG   G  +  R+ +N +      +N      +Y+DTGL  ++A A P  + ++   +  E   +A  V   ++ RA+ QL S L+++++    + ED+GRQ+L T  R++P  EL A I  V    +KRVA++ +  +  A+AA+G +  LP Y
Sbjct:  317 LTHIMIGLESCSFLEGDFIPFAVLNMMMGGGGSFSAGGP--GKGMFTRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIVTREFVLMAGTVDVVELERAKTQLTSMLMMNLEARPVIFEDVGRQVLATRSRKLPH-ELCALIRDVKPEDIKRVASKMLRGKP-AVAALGDLSELPAY 503          
The following BLAST results are available for this feature:
BLAST of CX671740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
MPPA_YEAST8.920e-1934.03Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_SOLTU5.782e-1830.62Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_SCHPO5.782e-1832.65Probable mitochondrial-processing peptidase subuni... [more]
MPPA1_ARATH2.197e-1732.98Probable mitochondrial-processing peptidase subuni... [more]
MPPA_BLAEM9.230e-1632.98Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA2_ARATH1.574e-1528.50Probable mitochondrial-processing peptidase subuni... [more]
MPPA_MOUSE4.581e-1529.56Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_PONAB5.983e-1530.05Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_HUMAN7.814e-1530.05Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_BOVIN7.814e-1529.32Mitochondrial-processing peptidase subunit alpha O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12H04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12H04-P8-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671740 ID=CX671740; Name=CX671740; organism=Citrus sinensis; type=EST; length=854bp
TTTTGAAGAGTGAAGACAGCTTACTTATTTCCTGAACAAATTATGAAGTT
ACAGAAGCAAGAGCTAGAAAAGAATTCAATAAAATACCATAGCCCTGAAG
CCTCTCCCAAGGGCATTGATTGTGTAAATTGCAACCCAAAAATTGTTTGA
AATCTCCGCCCAGGAAGGCGGGGATGCAGTAATGAACAACCATGAGATAA
CTTAGTATCTATTCCAGTAGGTTCTGCGTCTGAACCAGTTGTAGTCGGGT
AAACCTTGAATTGGACCCATTGCAGCAATTGCGATATCCCTGTCGTAAAT
AAATCTGTTTGCAACGCGCTTGACAGTGCTTGCATCTACGGAGTCTATCC
TAGCAAACAATTCAGCAAATGGGATTCTTCGACCATATGTAAGCAGCTGG
CGTCCAATATCTTCAGCTACAGGGCTTGTTCCATCAATGTGAAGCAACAG
GGATGATTTCAACTGATTACGGGCACGAGTGACATCAGCTTCTGAAACCC
GATAAGCTAACTTGGTAGTCTCGTACATAATTGCATAGGCCAAATCATCT
AAGCAATCCGGCTTAGCAACAGCATAAACACCAAACAGACCAGTGTCTTT
GTAGTTCGTGTTGAAGGCCATCATGCTTTCTGCAATTTCATTAATGCCAA
CTCTCTGTGCCAGCTCGGAACCCATGTGCTTTCCACCCACTGAATTTTTA
TTCCATGAACCCAACATTGCCTGCATAACCATCAGGGCAATTGAATCTGG
ATCTGTCCAAGATGCTCCAGCGAAAGCAACCGCAAATTGTGCCAAAGGAA
TATCGTCATCAATTATTCTAACCTCAGAACCAGTGAAAATTGCTGGTTCA
TTTG
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