CX671740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: MPPA_RAT (Mitochondrial-processing peptidase subunit alpha OS=Rattus norvegicus GN=Pmpca PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.639e-14 Identity = 53/177 (29.94%), Postives = 92/177 (51.98%), Query Frame = -3 Query: 241 DPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDY 753 + D I V+ M+G S GG G + R+ +N + +N +Y+DTGL ++A A P + ++ I E + V ++ RA+ QL S L+++++ + ED+GRQ+L T+ R++P EL I +V +KRVA++ + + A+AA+G + LP Y Sbjct: 330 EEDFIPFAVLNMMMGGGGSFSAGGP--GKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPH-ELCTLIRNVKPEDIKRVASKMLRGKP-AVAALGDLTDLPTY 502
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: QCR2_MOUSE (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus GN=Uqcrc2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.629e-12 Identity = 56/201 (27.86%), Postives = 102/201 (50.75%), Query Frame = -3 Query: 247 AIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAE-SMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLP 843 A + G E+R + D L A+ A+ + ++ A V+Q +LG+ + G + S L+Q V + AFN +Y D+GLFG+Y +++ ++ A + +A +S ADV A+N+LK+ L+ ++ + +IG Q L G +P + + +IDSV + V + A +F+ + ++AA G + P Sbjct: 251 AKYRGGEIREQNGD-NLVHAAIVAESAAIGNAEANAFSVLQHLLGA-GPHIKRGNNTTSLLSQSVAKGSHQPFDVSAFNASYSDSGLFGIYTISQAAAAGEVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKK-SMAASGNLGHTP 448
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: QCR2_RAT (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus GN=Uqcrc2 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12 Identity = 53/184 (28.80%), Postives = 95/184 (51.63%), Query Frame = -3 Query: 298 AIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI-NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFI 843 A + G E+R + D L A+ A+ + ++ A V+Q +LG+ + G + S L+Q V ++ + AFN +Y D+GLFG+Y V++ D+ A + +A +S ADV A+N+LK+ L+ ++ + +IG Q L G +P + +ID+V + V + A +F+ Sbjct: 250 AKYRGGEIREQNGD-NLVHAAIVAESAAIGNAEANAFSVLQHLLGA-GPHIKRGNNTTSLLSQSVAKGSQQPFDVSAFNASYSDSGLFGIYTVSQAAAAGDVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALATGSYMPPPTVLQQIDAVADADVVKAAKKFV 431
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: Y338_RICFE (Uncharacterized zinc protease RF_0338 OS=Rickettsia felis GN=RF_0338 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12 Identity = 49/195 (25.13%), Postives = 98/195 (50.26%), Query Frame = -3 Query: 262 PAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGP 846 PA + G I+ D+ + F G + + + + + A++ +S +H+ +L +A ++ ++N+ Y D+G+F +YA D L+ L + E TK+ +V+E ++ RA+ QL+S+LL+ + + +E+IG+ +G+ IP E+ I ++ A + AN+ I+ A +GP Sbjct: 221 PAKYIGGN-SFINKDLEQTTLILGFEGTPYINLERLYRTQLLAIIFGGGMSSRLFQHIREKLG-------LAYAVGSYNSTYSDSGVFTIYASTAHDKLELLYKELKTEITKMTEKVNEEEMIRAKTQLRSNLLMAQEKVAYKSEEIGKNYAAFGKYIPPEEIMEIITNIKADDIINTANK-IFSSITTSAIIGP 406
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: QCR2_HUMAN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens GN=UQCRC2 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12 Identity = 55/201 (27.36%), Postives = 98/201 (48.76%), Query Frame = -3 Query: 247 AIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVG-INEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLP 843 A + G E+R + D L A A ++ A V+Q +LG+ + G + S L Q V + + AFN +Y D+GLFG+Y +++ D+ A + +A +S DV A+N+LK+ L+ ++ + E++G Q L G +P + + +IDSV + + A +F+ + ++AA G + P Sbjct: 251 ANYRGGEIREQNGD-SLVHAAFVAESAVAGSAEANAFSVLQHVLGA-GPHVKRGSNTTSHLHQAVAKATQQPFDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTIAQGNLSNTDVQAAKNKLKAGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQK-SMAASGNLGHTP 448
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: QCR2_BOVIN (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus GN=UQCRC2 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11 Identity = 56/202 (27.72%), Postives = 102/202 (50.50%), Query Frame = -3 Query: 247 AIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRV--GINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLP 843 A + G E+R + D L A+ A+ ++ A V+Q +LG+ + G + S L Q V G+++ + + AFN +Y D+GLFG Y +++ D+ A + +A +S DV A+N+LK+ L+ ++ + +++G Q L G P + + +ID+V + V A +F+ R ++AA G + P Sbjct: 251 AKYHGGEIREQNGD-SLVHAALVAESAAIGSAEANAFSVLQHVLGA-GPHVKRGSNATSSLYQAVAKGVHQPFD-VSAFNASYSDSGLFGFYTISQAASAGDVIKAAYNQVKTIAQGNLSNPDVQAAKNKLKAGYLMSVESSEGFLDEVGSQALAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRK-SMAASGNLGHTP 448
BLAST of CX671740 vs. ExPASy Swiss-Prot
Match: Y522_RICBR (Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain RML369-C) GN=RBE_0522 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.013e-11 Identity = 48/195 (24.62%), Postives = 99/195 (50.77%), Query Frame = -3 Query: 262 PAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGP 846 PA + G I+ D+ + F G S+ + + + + A++ +S +H+ +L +A ++ ++N+ Y D+G+F +YA D L+ LA + E ++A +V + ++ RAR Q++S+L + + + +E+IG+ +G+ I E+ I ++ A+ + + ANR I+ A +GP Sbjct: 221 PAKYIGGH-SFINKDLEQTTLILGFEGTSYINLERLYQTQLLAIIFGGGMSSRLFQHIREKLG-------LAYAVGSYNSPYFDSGVFTIYASTAHDKLELLAAELKNEIKRMAEQVKQEEIERARTQIRSNLQMAQEKVAYKSEEIGKNYAVFGKYISPEEIMEIIMNIKAADIIQTANR-IFSSSATSAVIGP 406 The following BLAST results are available for this feature:
BLAST of CX671740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671740 ID=CX671740; Name=CX671740; organism=Citrus sinensis; type=EST; length=854bpback to top |