CX671737

Overview
NameCX671737
Unique NameCX671737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_LISIN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Listeria innocua GN=ispF PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.079e-37
Identity = 73/155 (47.10%), Postives = 108/155 (69.68%), Query Frame = 2
Query:  299 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763
            R+G G+D+H+L+    LIIGGI +P+E+G   HSD DVLLH + DAI+GA+G  DIG  FPD+D  +K A S+  + E  R ++  G+++GNLDAT+I ++PK++PY E ++  ++ELL A+P+ VN+KA T EK+   G    IA+  V+LL K
Sbjct:    3 RIGQGYDVHKLDYDRELIIGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGALDIGHFFPDTDMAYKDADSAELLAEIWRQVEAEGFKLGNLDATIIAEKPKMAPYVELMKRRIAELLHAEPSQVNVKATTTEKLGFTGREEGIASLAVVLLEK 157          
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_BACSU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus subtilis GN=ispF PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.079e-37
Identity = 76/156 (48.72%), Postives = 105/156 (67.31%), Query Frame = 2
Query:  296 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763
            FR+G GFD+H+L  G PLIIGGI +P+E+G   HSD DVLLH V DA LGA+G  DIG+ FPD+DP++K A S   ++    ++ + GY +GN+D T+I Q+PK+ PY E +R  ++E L AD + VN+KA T EK+   G    IAA   +L+ K
Sbjct:    2 FRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQK 157          
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_BACA2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus amyloliquefaciens (strain FZB42) GN=ispF PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.079e-37
Identity = 75/156 (48.08%), Postives = 105/156 (67.31%), Query Frame = 2
Query:  296 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763
            FR+G GFD+H+L  G PLIIGGI +P+E+G   HSD DVLLH V DA LGA G  DIG+ FPD+DP++K A S   ++    ++ E GY +GN+D T+I Q+PK++P+ + +R  ++E L AD + VN+KA T EK+   G    IAA   +L+ K
Sbjct:    2 FRIGQGFDVHQLTEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAAGEGDIGKHFPDTDPEFKDADSFKLLQHVWNIVKEKGYVLGNIDCTIIAQKPKMAPHIDAMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQK 157          
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_AZOSE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azoarcus sp. (strain EbN1) GN=ispF PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.079e-37
Identity = 75/157 (47.77%), Postives = 103/157 (65.61%), Query Frame = 2
Query:  293 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763
            PFR+G GFD+H L PG  LI+GG+++P ERG   HSD DVLLH + DA+LGA GL DIG++FPD+D    GA S V ++EA   +  AG+ + N+DAT+I + P++ P+   +  N++  LG D   VN+K KT EK+   G    IAA  V LLM+
Sbjct:    4 PFRIGQGFDVHALVPGRALIVGGVHIPFERGLLGHSDADVLLHALTDALLGAAGLGDIGRLFPDTDAAHAGADSRVLLREAFAAVRAAGFGVVNVDATVICRAPRILPHAPAMVANIAADLGIDAAAVNIKGKTTEKLGFTGRGEGIAAQVVALLMR 160          
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_BURPP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ispF PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.021e-37
Identity = 74/158 (46.84%), Postives = 105/158 (66.46%), Query Frame = 2
Query:  290 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763
            + FR+G G+D+H L PG PLIIGG+ +P+ERG   HSD DVLLH + DAI GA  + DIG+ F D+D K+ GA S V ++E    +  AG+ I N+D++++ Q PKL+P+ E +R N++  LG     VN+KAKT+EK+  LG    I A   +LL+K
Sbjct:    1 MDFRIGQGYDVHALVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDAIFGAAAMGDIGRHFSDTDAKFAGADSRVLLRECFARVKAAGFSIANVDSSVVAQAPKLAPHIEGMRANIAADLGLPVERVNVKAKTNEKLGYLGRGEGIEAQAAVLLIK 158          
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_BURM1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=ispF PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.021e-37
Identity = 76/159 (47.80%), Postives = 107/159 (67.30%), Query Frame = 2
Query:  290 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 766
            + FR+G G+D+H+L  G PLIIGG+++P+ERG   HSD DVLLH + DA+ GA  L DIG+ F D+D  +KGA S V ++E V  +  AG+ I N+D+T+I Q PKL+P+ E +R N++  LG     VN+KAKT+EK+  LG    I A    LL+K+
Sbjct:    1 MDFRIGQGYDVHQLVAGRPLIIGGVSIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDAAFKGADSRVLLRECVARVKAAGFAIQNVDSTVIAQAPKLAPHIEAMRANIAADLGLPLERVNVKAKTNEKLGYLGRGEGIEAQAAALLVKQ 159          
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_BACSK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus clausii (strain KSM-K16) GN=ispF PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.021e-37
Identity = 73/155 (47.10%), Postives = 105/155 (67.74%), Query Frame = 2
Query:  299 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763
            R+G GFD+H+L  G PL++GG+++PH +G   HSD DVLLH + DA LGA+G  D+G+ FPD+D  +K A S   + +A +L+  AGY +GN+D T++ Q+PKL+PY E +R  ++ELL  D   V++KA T E +  +G    IAA  VILL K
Sbjct:    3 RIGQGFDVHQLTEGRPLLLGGVHIPHPKGLLGHSDADVLLHTITDAALGAIGAGDLGKHFPDTDEAFKDADSKHLLSQAWQLVKNAGYTLGNVDCTVMAQKPKLAPYIEAMRKQIAELLETDVANVSVKATTTETLGFVGREEGIAAQAVILLQK 157          
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_SHEHH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ispF PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.252e-37
Identity = 75/158 (47.47%), Postives = 106/158 (67.09%), Query Frame = 2
Query:  290 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763
            +  R+GHGFD+H+     PLI+GG++VP+E G  AHSDGDV LH + DAILGA+ L DIG+ FPD+DP++KGA S V ++   +L  + G+ + NLD T+I Q PK++P+ E IR  L+  L AD   +N+KA T EK+   G    IA   V+L++K
Sbjct:    1 MKIRIGHGFDVHKFGGEPPLILGGVDVPYEVGLIAHSDGDVALHAISDAILGAMALGDIGKHFPDTDPEFKGADSRVLLRHCYQLATDMGFSLSNLDVTIIAQAPKMAPHIEAIRKVLAADLVADINDINVKATTTEKLGFTGRKEGIAVEAVVLMIK 158          
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_PELPD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelobacter propionicus (strain DSM 2379) GN=ispF PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.252e-37
Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = 2
Query:  299 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 766
            R+GHG+D+H+L  G  LI+GG+++P E+G   HSD DVLLH + DAILGALG  DIG+ FPD+DP +KGA S   ++    L    GY +GNLDAT+I QRPK++P+   +R N++ +L +    VN+KA T E +   G    I+AH V+L++ K
Sbjct:    2 RIGHGYDVHKLVEGRKLIMGGVDIPWEKGLLGHSDADVLLHAIADAILGALGEGDIGKHFPDTDPAYKGADSLKLLEHVANLAIAKGYCLGNLDATIIAQRPKMAPHIPAMRENIARVLRSTVDRVNVKATTEEGLSFTGRGEGISAHAVVLMIGK 157          
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_DECAR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Dechloromonas aromatica (strain RCB) GN=ispF PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.252e-37
Identity = 74/154 (48.05%), Postives = 104/154 (67.53%), Query Frame = 2
Query:  296 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILL 757
            FRVG G+D+H+L  G  LI+GG+ +PH  G   HSD D LLH + DA+LGA+ L DIG+ FPD+DP++KGA S V ++ AV L+ E G+   N+DATLI Q+PKL+P+   +  N++  LG  P  VN+K KT+E++  LG   +I A  V L+
Sbjct:    3 FRVGQGYDVHKLVDGRKLILGGVEIPHPTGLLGHSDADALLHAITDALLGAVALGDIGRHFPDTDPRYKGADSRVLLRAAVALLAERGWRPVNVDATLIAQQPKLAPHAVAMVANVAADLGISPDCVNIKGKTNERLGYLGREEAIEAQAVALV 156          
The following BLAST results are available for this feature:
BLAST of CX671737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_LISIN3.079e-3747.102-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACSU3.079e-3748.722-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACA23.079e-3748.082-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_AZOSE3.079e-3747.772-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BURPP4.021e-3746.842-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BURM14.021e-3747.802-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_BACSK4.021e-3747.102-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_SHEHH5.252e-3747.472-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_PELPD5.252e-3747.442-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_DECAR5.252e-3748.052-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12H02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12H02-P4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671737 ID=CX671737; Name=CX671737; organism=Citrus sinensis; type=EST; length=822bp
ATATCGAGCAGACAGCAGAGCACGAACAGCGTCTCTCCTCTCTTCGTAAA
ATTAGATGGTGTTGACGATGGCCGCTCAATCATACACCACCACTCCTCTC
CACAGCAAAATTACGAATAAGCCACTATGTCCTCCTCCGTTGAGTTTGAA
GCCTCGTAGCTTAACCGCCAAACATCTCCGCACAACACAGTCAACGTCGC
TGCCTCGTATTTCAGTTTCAGCTGCAGCCATTTCTTCCATCGAAGTTAAA
GAGTCATCGGCTTCGATCCAACCGTCCAAATCAAAATCACTGCCTTTTCG
TGTGGGCCACGGGTTTGATCTTCATAGATTGGAGCCTGGCTACCCTCTGA
TCATCGGTGGAATCAATGTTCCCCACGAGAGAGGCTGCGAGGCTCACTCT
GACGGTGATGTTTTGCTTCACTGTGTTGTGGATGCAATTTTGGGAGCATT
GGGTCTTCCTGATATTGGTCAGATATTTCCTGATTCTGATCCTAAGTGGA
AGGGTGCACCATCCTCTGTTTTTATCAAAGAAGCTGTGAGACTCATGGAT
GAGGCCGGCTATGAGATTGGCAACTTGGATGCCACGCTGATTCTTCAAAG
ACCAAAATTGAGCCCATACAAGGAGACTATCCGAACCAACTTGTCTGAAC
TGCTAGGAGCAGACCCCACCGTTGTAAATCTGAAAGCGAAAACTCATGAA
AAAGTTGATAGCCTTGGTGAAAATCGAAGTATTGCAGCTCACACTGTGAT
CCTTCTCATGAAGAAGTAAAATAAACGATTTGGGAATTGTCTTAAATGTA
GCAGTTGTATCCTATTATCATT
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