CX671737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_LISIN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Listeria innocua GN=ispF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.079e-37 Identity = 73/155 (47.10%), Postives = 108/155 (69.68%), Query Frame = 2 Query: 299 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763 R+G G+D+H+L+ LIIGGI +P+E+G HSD DVLLH + DAI+GA+G DIG FPD+D +K A S+ + E R ++ G+++GNLDAT+I ++PK++PY E ++ ++ELL A+P+ VN+KA T EK+ G IA+ V+LL K Sbjct: 3 RIGQGYDVHKLDYDRELIIGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGALDIGHFFPDTDMAYKDADSAELLAEIWRQVEAEGFKLGNLDATIIAEKPKMAPYVELMKRRIAELLHAEPSQVNVKATTTEKLGFTGREEGIASLAVVLLEK 157
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_BACSU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus subtilis GN=ispF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.079e-37 Identity = 76/156 (48.72%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 296 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763 FR+G GFD+H+L G PLIIGGI +P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+DP++K A S ++ ++ + GY +GN+D T+I Q+PK+ PY E +R ++E L AD + VN+KA T EK+ G IAA +L+ K Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQK 157
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_BACA2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus amyloliquefaciens (strain FZB42) GN=ispF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.079e-37 Identity = 75/156 (48.08%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 296 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763 FR+G GFD+H+L G PLIIGGI +P+E+G HSD DVLLH V DA LGA G DIG+ FPD+DP++K A S ++ ++ E GY +GN+D T+I Q+PK++P+ + +R ++E L AD + VN+KA T EK+ G IAA +L+ K Sbjct: 2 FRIGQGFDVHQLTEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAAGEGDIGKHFPDTDPEFKDADSFKLLQHVWNIVKEKGYVLGNIDCTIIAQKPKMAPHIDAMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQK 157
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_AZOSE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azoarcus sp. (strain EbN1) GN=ispF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.079e-37 Identity = 75/157 (47.77%), Postives = 103/157 (65.61%), Query Frame = 2 Query: 293 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763 PFR+G GFD+H L PG LI+GG+++P ERG HSD DVLLH + DA+LGA GL DIG++FPD+D GA S V ++EA + AG+ + N+DAT+I + P++ P+ + N++ LG D VN+K KT EK+ G IAA V LLM+ Sbjct: 4 PFRIGQGFDVHALVPGRALIVGGVHIPFERGLLGHSDADVLLHALTDALLGAAGLGDIGRLFPDTDAAHAGADSRVLLREAFAAVRAAGFGVVNVDATVICRAPRILPHAPAMVANIAADLGIDAAAVNIKGKTTEKLGFTGRGEGIAAQVVALLMR 160
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_BURPP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ispF PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.021e-37 Identity = 74/158 (46.84%), Postives = 105/158 (66.46%), Query Frame = 2 Query: 290 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763 + FR+G G+D+H L PG PLIIGG+ +P+ERG HSD DVLLH + DAI GA + DIG+ F D+D K+ GA S V ++E + AG+ I N+D++++ Q PKL+P+ E +R N++ LG VN+KAKT+EK+ LG I A +LL+K Sbjct: 1 MDFRIGQGYDVHALVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDAIFGAAAMGDIGRHFSDTDAKFAGADSRVLLRECFARVKAAGFSIANVDSSVVAQAPKLAPHIEGMRANIAADLGLPVERVNVKAKTNEKLGYLGRGEGIEAQAAVLLIK 158
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_BURM1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=ispF PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.021e-37 Identity = 76/159 (47.80%), Postives = 107/159 (67.30%), Query Frame = 2 Query: 290 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 766 + FR+G G+D+H+L G PLIIGG+++P+ERG HSD DVLLH + DA+ GA L DIG+ F D+D +KGA S V ++E V + AG+ I N+D+T+I Q PKL+P+ E +R N++ LG VN+KAKT+EK+ LG I A LL+K+ Sbjct: 1 MDFRIGQGYDVHQLVAGRPLIIGGVSIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDAAFKGADSRVLLRECVARVKAAGFAIQNVDSTVIAQAPKLAPHIEAMRANIAADLGLPLERVNVKAKTNEKLGYLGRGEGIEAQAAALLVKQ 159
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_BACSK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus clausii (strain KSM-K16) GN=ispF PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.021e-37 Identity = 73/155 (47.10%), Postives = 105/155 (67.74%), Query Frame = 2 Query: 299 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763 R+G GFD+H+L G PL++GG+++PH +G HSD DVLLH + DA LGA+G D+G+ FPD+D +K A S + +A +L+ AGY +GN+D T++ Q+PKL+PY E +R ++ELL D V++KA T E + +G IAA VILL K Sbjct: 3 RIGQGFDVHQLTEGRPLLLGGVHIPHPKGLLGHSDADVLLHTITDAALGAIGAGDLGKHFPDTDEAFKDADSKHLLSQAWQLVKNAGYTLGNVDCTVMAQKPKLAPYIEAMRKQIAELLETDVANVSVKATTTETLGFVGREEGIAAQAVILLQK 157
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_SHEHH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ispF PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.252e-37 Identity = 75/158 (47.47%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 290 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMK 763 + R+GHGFD+H+ PLI+GG++VP+E G AHSDGDV LH + DAILGA+ L DIG+ FPD+DP++KGA S V ++ +L + G+ + NLD T+I Q PK++P+ E IR L+ L AD +N+KA T EK+ G IA V+L++K Sbjct: 1 MKIRIGHGFDVHKFGGEPPLILGGVDVPYEVGLIAHSDGDVALHAISDAILGAMALGDIGKHFPDTDPEFKGADSRVLLRHCYQLATDMGFSLSNLDVTIIAQAPKMAPHIEAIRKVLAADLVADINDINVKATTTEKLGFTGRKEGIAVEAVVLMIK 158
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_PELPD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelobacter propionicus (strain DSM 2379) GN=ispF PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.252e-37 Identity = 74/156 (47.44%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 299 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 766 R+GHG+D+H+L G LI+GG+++P E+G HSD DVLLH + DAILGALG DIG+ FPD+DP +KGA S ++ L GY +GNLDAT+I QRPK++P+ +R N++ +L + VN+KA T E + G I+AH V+L++ K Sbjct: 2 RIGHGYDVHKLVEGRKLIMGGVDIPWEKGLLGHSDADVLLHAIADAILGALGEGDIGKHFPDTDPAYKGADSLKLLEHVANLAIAKGYCLGNLDATIIAQRPKMAPHIPAMRENIARVLRSTVDRVNVKATTEEGLSFTGRGEGISAHAVVLMIGK 157
BLAST of CX671737 vs. ExPASy Swiss-Prot
Match: ISPF_DECAR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Dechloromonas aromatica (strain RCB) GN=ispF PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.252e-37 Identity = 74/154 (48.05%), Postives = 104/154 (67.53%), Query Frame = 2 Query: 296 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVNLKAKTHEKVDSLGENRSIAAHTVILL 757 FRVG G+D+H+L G LI+GG+ +PH G HSD D LLH + DA+LGA+ L DIG+ FPD+DP++KGA S V ++ AV L+ E G+ N+DATLI Q+PKL+P+ + N++ LG P VN+K KT+E++ LG +I A V L+ Sbjct: 3 FRVGQGYDVHKLVDGRKLILGGVEIPHPTGLLGHSDADALLHAITDALLGAVALGDIGRHFPDTDPRYKGADSRVLLRAAVALLAERGWRPVNVDATLIAQQPKLAPHAVAMVANVAADLGISPDCVNIKGKTNERLGYLGREEAIEAQAVALV 156 The following BLAST results are available for this feature:
BLAST of CX671737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671737 ID=CX671737; Name=CX671737; organism=Citrus sinensis; type=EST; length=822bpback to top |