CX671734

Overview
NameCX671734
Unique NameCX671734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671734 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.974e-23
Identity = 61/161 (37.89%), Postives = 99/161 (61.49%), Query Frame = -1
Query:  345 GIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLF-EMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL-RNGSSSEIMRCIHIGLLCVQENVANRPTM 821
            G ARG+ YLH  S   IIHRD+K++NILLD + + K++DFG+++   ++DQ+   T+ + G+FGY+ PEY+TR   + KSDV+SFGV++LE++ G+      +  E  +L+ +A K   +G   ++IDP L       E+ +   +   C+ +N   RP M
Sbjct:  592 GAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTA-VKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERPAM 751          
BLAST of CX671734 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.579e-23
Identity = 66/164 (40.24%), Postives = 96/164 (58.54%), Query Frame = -1
Query:  345 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLI-DPTLRNGSSSEIMRCI-HIGLLCVQENVANRPTM 830
            I+ G A G+ YLH+   L++I+RD K+SN+LLD    PK+SDFG+AR      +   T+  VGT GY APEYV  GH  +KSDV+SFGV++ EII+G++            LL +  +   +    ++I DP LRN   +   R +  +  LC+++N   RPTM
Sbjct:  198 IMLGAAEGLTYLHD---LKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTM 358          
BLAST of CX671734 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.579e-23
Identity = 64/165 (38.79%), Postives = 99/165 (60.00%), Query Frame = -1
Query:  342 GIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAED----LLTYAWKNWNEGTALNLIDPTLR-NGSSSEIMRCIHIGLLCVQENVANRPTMA 821
            G ARG+ YLH+    +IIHRD+KA+NILLD +    + DFG+A+L +   +   T+ + GT G++APEY++ G  S K+DVF +G+++LE+I+GQ+  +F +   A D    LL +      E     L+DP L+ N    E+ + I + LLC Q +   RP M+
Sbjct:  409 GSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQR--AFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMS 570          
BLAST of CX671734 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.579e-23
Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = -1
Query:  345 ARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAW-KNWNE--------GTALNLIDPTLRNGSSSEIMRCIHIGLLCVQENVANRPTM 815
            A+G+ YLH D    I+HRD+K++NILLD+D    ++DFG+A+      +    S I G++GY+APEY        KSDV+SFGV++LE+I+G+K     +GE  E +    W +N  E           + ++DP L     + ++    I ++CV+E  A RPTM
Sbjct:  799 AKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKK----PVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTM 960          
BLAST of CX671734 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.368e-23
Identity = 60/159 (37.74%), Postives = 91/159 (57.23%), Query Frame = -1
Query:  345 IARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSSSE-IMRCIHIGLLCVQENVANRPTM 818
            IA  + Y+H  +   I HRD+K +NILLD     K+SDFG +R   +DQ+   T+ + GTFGYM PEY     ++ KSDV+SFGV+++E+I+G+K  S    EE   L T+  +   E   +++ID  +++ S  E +M    +   C+     NRP M
Sbjct:  535 IAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHL-TTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNM 692          
BLAST of CX671734 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.368e-23
Identity = 60/159 (37.74%), Postives = 92/159 (57.86%), Query Frame = -1
Query:  345 IARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNGSS-SEIMRCIHIGLLCVQENVANRPTM 818
            +A  + YLH  + + IIHRD+K +NILLD ++  K++DFG ++L  MD+ Q  T+ + GT GY+ PEY T G  + KSDV+SFGV+++E++SGQK   F   + ++ L++Y      E     +ID  + N  +  EI     I   C +     RP M
Sbjct:  521 VAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQL-TTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERPRM 678          
BLAST of CX671734 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23
Identity = 60/159 (37.74%), Postives = 93/159 (58.49%), Query Frame = -1
Query:  345 IARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTLRNG-SSSEIMRCIHIGLLCVQENVANRPTM 818
            +A  + YLH  + + IIHRD+K +NILLD ++  K++DFG +RL  MDQ Q  T+ + GT GY+ PEY   G  + KSDV+SFGV+++E++SG+K   F   + ++ L++Y      E     +ID  + N  +  EI     I + C +     RP+M
Sbjct:  514 VAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQL-TTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSM 671          
BLAST of CX671734 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23
Identity = 58/161 (36.02%), Postives = 99/161 (61.49%), Query Frame = -1
Query:  345 IARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQK--NNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL-RNGSSSEIMRCIHIGLLCVQENVANRPTM 818
            +AR + YLHE    +++HRD+K SNILLD +    +SDFG+++L    QS   T+ + GTFGY+APEY      S K+DV+S+G+++LE+IS ++  + SF   E   +++++A    ++G A  +    L   G   +++  +H+ L C  ++++ RPTM
Sbjct:  366 VARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSH-VTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCTVDSLSIRPTM 525          
BLAST of CX671734 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.399e-23
Identity = 59/165 (35.76%), Postives = 97/165 (58.79%), Query Frame = -1
Query:  342 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTAL-NLIDPTLRNGSSSE-IMRCIHIGLLCVQENVANRPTMA 830
            I  G ARG+ YLH+     +I+RDLK SNILL  D  PK+SDFG+A++         ++R++GT+GY AP+Y   G  + KSD++SFGV++LE+I+G+K        + ++L+ +A   + +      ++DP L+       + + + I  +CVQE    RP ++
Sbjct:  207 IAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVS 371          
BLAST of CX671734 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.745e-23
Identity = 61/166 (36.75%), Postives = 94/166 (56.63%), Query Frame = -1
Query:  345 IIGGIARGILYLHEDSRLRIIHRDLKASNILLDADMIPKISDFGMARLFEMDQSQGDTSRIVGTFGYMAPEYVTRGHFSIKSDVFSFGVLVLEIISGQKNNSFRIGEEAEDLLTYAWKNWNEGTALNLIDPTL----RNGSSSEIMRCIHIGLLCVQENVANRPTM 830
            ++ G+A  + Y+H D    I+HRD+ + NILLD D   KISDFG A+L + D S  + S + GT+GY+APE+      + K DV+SFGVL+LE+I         IG+   DL++    +  E  +L  I        R  +  ++++ + + LLC+Q N  +RPTM
Sbjct:  958 VVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISDFGTAKLLKTDSS--NWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFGVLILELI---------IGKHPGDLVSSLSSSPGEALSLRSISDERVLEPRGQNREKLLKMVEMALLCLQANPESRPTM 1112          
The following BLAST results are available for this feature:
BLAST of CX671734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 365
Match NameE-valueIdentityDescription
Y2393_ARATH1.974e-2337.89Probable receptor-like protein kinase At2g39360 OS... [more]
Y5707_ARATH2.579e-2340.24Probable receptor-like protein kinase At5g47070 OS... [more]
SERK1_ARATH2.579e-2338.79Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CLV1_ARATH2.579e-2336.75Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
WAKLA_ARATH3.368e-2337.74Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAK3_ARATH3.368e-2337.74Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
WAK5_ARATH4.399e-2337.74Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
RPK1_ARATH4.399e-2336.02Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH4.399e-2335.76Probable serine/threonine-protein kinase RLCKVII O... [more]
Y1571_ARATH5.745e-2336.75Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12H01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12H01-P2-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671734 ID=CX671734; Name=CX671734; organism=Citrus sinensis; type=EST; length=830bp
TTTTTTTTATGTAATTAATTCTTAATTATCTTCTATAAGTAATTAACAAT
ACGCAATGAGACAAAATCTTTAAAAGATTAGCATCGATCCAAATTCATCT
CATACAATAAATATCATAGAACAAACTTGTTTAAAGATAGAGCCTCTGTC
CCTGAAAGTTAGCGAGGGTCTAGCTCACTAACTGTAACTTCATTGACGGT
AAAATGGATGGAACCGCTTTTAGATTGATCAGATGCGGTGAATTCCAAAT
TATCCTGCTCCATTGTAGTGTGCATAAAAAATGCAGGCTGCGAAGGTAGT
GGCAGGGAGAGAGAGCTGCTATTAAGCATGACAACAACCGAAGCCATGGT
TGGTCTATTTGCAACATTTTCTTGAACACATAGCAATCCGATGTGGATAC
ATCTCATTATTTCACTACTGGAACCATTCCTCAGTGTGGGATCTATCAGA
TTTAAAGCTGTTCCTTCGTTCCAATTTTTCCATGCGTAGGTCAGTAAGTC
CTCAGCCTCCTCTCCAATACGGAAACTATTATTCTTTTGACCACTGATGA
TTTCCAAGACTAACACACCAAAGCTAAAAACATCAGATTTAATGGAGAAG
TGCCCTCGCGTTACATATTCTGGAGCCATGTAGCCAAATGTCCCGACAAT
TCTACTTGTATCGCCTTGACTTTGATCCATTTCAAACAACCTTGCCATTC
CAAAGTCTGAAATTTTTGGAATCATGTCTGCATCTAAAAGAATATTGCTT
GCTTTGAGGTCACGATGAATGATCCGTAACCTTGAATCTTCGTGAAGGTA
AAGAATTCCTCGAGCTATGCCCCCAATGAT
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