EG358280

Overview
NameEG358280
Unique NameEG358280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358280 vs. ExPASy Swiss-Prot
Match: FLRT_CITMA (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima GN=C12RT1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.718e-15
Identity = 57/183 (31.15%), Postives = 93/183 (50.82%), Query Frame = 1
Query:   13 PSPNEIVAIAEALEASKVPFIWSLRHRSQAN------LPNGF---LERTRSDGIVVDWATQVNVLAHEAVGVFVTHCGWGSILESIAAGVPMIGRPFFGDQRINGRMMEQIWGVGIAVDGGGICTK---EGLLSSLDLILCQEKGIKIREKVTKLKQLCQNAIGPGGSSMQNLDALLDMISRS 525
            PS +EI  IA  L  ++V FIW+ R            LP GF   +ER     IV  W  Q  +L H ++G F++HCGWGS++E +  GVP+IG P   +Q  N +++    G+G+ V    I  +   E +   +  ++ QE+  +IR K  ++ +     IG    S+  ++ LL ++ +S
Sbjct:  272 PSTDEIHDIAIGLLLTEVNFIWAFRLHPDEKMTIEEALPQGFAEEIERNNKGMIVQGWVPQAKILRHGSIGGFLSHCGWGSVVEGMVFGVPIIGVPMAYEQPSNAKVVVDN-GMGMVVPRDKINQRLGGEEVARVIKHVVLQEEAKQIRRKANEISE-SMKKIGDAQMSVV-VEKLLQLVKKS 451          
BLAST of EG358280 vs. ExPASy Swiss-Prot
Match: UFOG_PETHY (Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.265e-12
Identity = 45/161 (27.95%), Postives = 80/161 (49.69%), Query Frame = 1
Query:   22 NEIVAIAEALEASKVPFIWSLRHRSQAN--------LPNGFLERTRSDGIVVD-WATQVNVLAHEAVGVFVTHCGWGSILESIAAGVPMIGRPFFGDQRINGRMMEQIWGVGIAV---DGGGICTKEGLLSSLDLILC---QEKGIKIREKVTKLKQLCQN 459
            +++  +A  LE + +PF   L   +  +        LP GFLER +  GI+   W  Q N+LAH +VG +V H G+ S++E++     ++  P  GDQ +N +++      G+ +   D  G   KE +  +++ ++    ++ G  IRE   K K+   N
Sbjct:  289 DQVKELALGLEQTGLPFFLVLNFPANVDVSAELNRALPEGFLERVKDKGIIHSGWVQQQNILAHSSVGCYVCHAGFSSVIEALVNDCQVVMLPQKGDQILNAKLVSGDMEAGVEINRRDEDGYFGKEDIKEAVEKVMVDVEKDPGKLIRENQKKWKEFLLN 449          
The following BLAST results are available for this feature:
BLAST of EG358280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
FLRT_CITMA2.718e-1531.15Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltran... [more]
UFOG_PETHY6.265e-1227.95Anthocyanidin 3-O-glucosyltransferase OS=Petunia h... [more]

Pages

back to top
Properties
Property NameValue
Genbank description5b12 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl005b12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358280 ID=EG358280; Name=EG358280; organism=Citrus sinensis; type=EST; length=632bp
ACAGTGGCAACACCATCTCCAAACGAAATTGTGGCAATAGCAGAGGCCTT
GGAAGCAAGTAAAGTGCCATTTATTTGGTCACTGAGACATAGGTCGCAGG
CAAATCTGCCAAATGGGTTCCTGGAAAGGACAAGATCTGATGGAATTGTG
GTGGATTGGGCCACCCAGGTCAATGTTTTAGCACATGAAGCAGTTGGGGT
CTTTGTAACACATTGTGGTTGGGGCTCAATCCTTGAAAGCATAGCTGCAG
GTGTGCCGATGATCGGGAGGCCATTCTTTGGGGATCAGCGGATTAATGGA
AGAATGATGGAACAAATATGGGGGGTTGGTATCGCTGTAGATGGTGGAGG
GATTTGCACAAAGGAAGGTTTACTCAGCAGCTTGGATCTAATTTTGTGCC
AAGAGAAAGGAATCAAAATAAGGGAGAAGGTTACAAAGCTGAAGCAACTG
TGCCAAAATGCAATTGGTCCCGGTGGAAGTTCCATGCAAAATCTTGATGC
ATTGTTAGACATGATATCAAGATCTTATTAGGCTTACTTTTATGTTAATT
GGTCCATATGTAATATTGATCCGGCGCTCGTATTGAGCCTTTGGCCTGGC
CTGATTAGCGAATGTACTTCGGCCGCGACCAC
back to top