EG358279

Overview
NameEG358279
Unique NameEG358279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX2_ARATH (Probable glutathione peroxidase 2 OS=Arabidopsis thaliana GN=GPX2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.239e-15
Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 578
            V VNG N  PLYK+LKA K G     IKWNFTKFLV  +G V+ RYSP TSP+  E DI+ ALG
Sbjct:  102 VDVNGKNTAPLYKYLKAEKGGLLIDAIKWNFTKFLVSPDGKVLQRYSPRTSPLQFEKDIQTALG 165          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX1_PEA (Phospholipid hydroperoxide glutathione peroxidase, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.149e-15
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            V VNGP   P+Y+FLK+S  G+FG  +KWNF KFLVD  G V+ RY PTTSP  IE DI+  L
Sbjct:  172 VDVNGPFTAPVYQFLKSSSGGFFGDIVKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLL 234          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX1_ARATH (Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic OS=Arabidopsis thaliana GN=GPX1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.815e-14
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            V VNGP+  P+Y+FLK++  G+ G  IKWNF KFL+D +G V+ RY PTTSP  IE DI+  L
Sbjct:  172 VDVNGPSTAPIYEFLKSNAGGFLGGLIKWNFEKFLIDKKGKVVERYPPTTSPFQIEKDIQKLL 234          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX1_SCHMA (Glutathione peroxidase OS=Schistosoma mansoni GN=GPX1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.097e-14
Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 3
Query:  381 SSVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            S ++VNG +A+ LYKFLK+ + G   + IKWNF+KFLVD +G  + RYSPTT+P  IEGDI   L
Sbjct:  102 SKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELL 166          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: BSAA_BACHD (Glutathione peroxidase homolog bsaA OS=Bacillus halodurans GN=bsaA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.898e-14
Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            V+VNG  A PL+++L + + G F  +IKWNFTKFL+D  GNV+ RY+P+TSP+ I+ DI+  L
Sbjct:   95 VKVNGKEAHPLFQYLTSQQGGLFTEKIKWNFTKFLIDRSGNVVKRYAPSTSPIKIKDDIEELL 157          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX7_ARATH (Putative glutathione peroxidase 7, chloroplastic OS=Arabidopsis thaliana GN=GPX7 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.537e-13
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIE 554
            V VNGP+  P+YKFLK++  G+ G  IKWNF KFLVD +G V+ RY PTTSP  IE
Sbjct:  169 VDVNGPSTAPIYKFLKSNAGGFLGDIIKWNFEKFLVDKKGKVVERYPPTTSPFQIE 224          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX1_CAEEL (Probable glutathione peroxidase F26E4.12 OS=Caenorhabditis elegans GN=F26E4.12 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.537e-13
Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 581
            + VNG    PL+KFLK  K G+    IKWNFTKFLV  +G +I R+ PTT P  +E DIK ALG+
Sbjct:   97 IDVNGDKQSPLFKFLKNEKGGFMFDAIKWNFTKFLVGRDGKIIKRFGPTTDPKDMEKDIKEALGE 161          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX2_CAEEL (Probable glutathione peroxidase R05H10.5 OS=Caenorhabditis elegans GN=R05H10.5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.007e-13
Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            + VNG N  PLYKFLK  K G+    IKWNFTKFLV  +G+VI R+SPTT P  ++ DI+ AL
Sbjct:   97 IDVNGDNTAPLYKFLKQEKGGFLVDAIKWNFTKFLVGRDGHVIKRFSPTTEPKDMKKDIEAAL 159          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.471e-13
Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = -3
Query:   55 VGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKL-AINVSAR 357
            VG +  W+  P  P  Y +W+    F V DTL F++A G   V  V ++ ++ACNT +P+ R  +  + ++L   GP YFI     +C  GQKL  + +SAR
Sbjct:   33 VGGSGAWVTNP--PENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 132          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPO_LACLA (Glutathione peroxidase OS=Lactococcus lactis subsp. lactis GN=gpo PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 7.627e-13
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            ++VNG  A PLY+FLK    G     IKWNFTKFL+D EGNVI R++P T P  +E +I+  L
Sbjct:   95 IKVNGKEAHPLYQFLKKEAKGALSGTIKWNFTKFLIDREGNVIERFAPKTEPKEMEEEIQKLL 157          
The following BLAST results are available for this feature:
BLAST of EG358279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
GPX2_ARATH6.239e-1560.94Probable glutathione peroxidase 2 OS=Arabidopsis t... [more]
GPX1_PEA8.149e-1558.73Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX1_ARATH1.815e-1455.56Phospholipid hydroperoxide glutathione peroxidase ... [more]
GPX1_SCHMA3.097e-1455.38Glutathione peroxidase OS=Schistosoma mansoni GN=G... [more]
BSAA_BACHD6.898e-1452.38Glutathione peroxidase homolog bsaA OS=Bacillus ha... [more]
GPX7_ARATH1.537e-1360.71Putative glutathione peroxidase 7, chloroplastic O... [more]
GPX1_CAEEL1.537e-1353.85Probable glutathione peroxidase F26E4.12 OS=Caenor... [more]
GPX2_CAEEL2.007e-1357.14Probable glutathione peroxidase R05H10.5 OS=Caenor... [more]
ENL2_ARATH4.471e-1336.27Early nodulin-like protein 2 OS=Arabidopsis thalia... [more]
GPO_LACLA7.627e-1352.38Glutathione peroxidase OS=Lactococcus lactis subsp... [more]

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Properties
Property NameValue
Genbank description10b3 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358279 ID=EG358279; Name=EG358279; organism=Citrus sinensis; type=EST; length=641bp
ACTACCGCTGGGCTGAGGGGCCGGAGAAGAAGGTTGGGGAGCAGGAGAAG
ATCCCCTGGCGCTAACGTTGATGGCTAATTTCTGACCGCCGAGGCAGTGG
CCTGGAAATGAGCAAATGAAGTAGTGTGGCCCAGAAGCTGTAAGAGTAAC
ACTCGCAGGGCTATTTGTGGTTCTGGATAGGGGACTAGTGGTGTTGCATG
CATTGAATGATGATTGTGTTACTCGAGTAACATCATGGTTTCCAGCGGCA
AAGTTAAACACAAGAGTGTCACCGACGGTGAAGGTCTGGTTTGCAGCCCA
GTTAGAGTAAGTAGCAGGACCATTAGGAGGAACAATCCAGCCTAGTGCAT
CACCCACCACATGCCTTGTCTGTGCCGTCGAGCTCTGTACGCGTCAATGG
TCCAAATGCGGAACCTCTATATAAATTTCTCAAAGCAAGTAAAACTGGAT
ACTTTGGGTCCAGAATAAAGTGGAACTTCACCAAGTTTTTAGTTGATACA
GAAGGAAATGTCATCGGGCGTTATAGCCCAACCACTTCTCCGATGGCAAT
TGAGGGTGACATAAAGAATGCACTGGGAGATGTTTAGGAGATTTCTGGGT
GACTAGTCATTCCTGTGCAAGACATGATATAATAGTGTATG
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