EG358279

Overview
NameEG358279
Unique NameEG358279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.627e-13
Identity = 39/101 (38.61%), Postives = 51/101 (50.50%), Query Frame = -3
Query:   61 HVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 363
            + VGD  GW    +G      W A +TF  GD LVF +    H+V  V    + +C T SP SR   S       + G +YFICS PGHC GG K+A+  +
Sbjct:   33 YTVGDGGGWTFGTSG------WPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSC-TASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLKIAVTAA 126          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX1_HELAN (Glutathione peroxidase 1 OS=Helianthus annuus GN=GPXHA-1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 33/64 (51.56%), Postives = 42/64 (65.62%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 578
            + VNG NA P+Y+FLK    G  G  I+WNF+KFLVD  G  +  Y PTTSP+ +E DI+  LG
Sbjct:  102 IDVNGENAAPVYEFLKTGFYGILGGDIQWNFSKFLVDKNGQPVDCYYPTTSPLTVERDIQKLLG 165          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.898e-12
Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = -3
Query:   64 VVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 360
            V G    W +P +   + + WA +  F VGDTLV+ +      V +VT+ ++  CNTT+P +  +N    V L  SGP++FI     +C+ G+KL I V
Sbjct:   28 VGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVV 126          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: BSAA_BACSU (Glutathione peroxidase homolog bsaA OS=Bacillus subtilis GN=bsaA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.898e-12
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 3
Query:  381 SSVRVNGPNAEPLYKFLKASKTGYFGSR-IKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            S V VNG NA PL+ +L     G  G++ IKWNFTKF+VD  G ++GRYSP T+P  +E DI   L
Sbjct:   93 SKVDVNGKNAHPLFVYLTEHAKGMLGTKAIKWNFTKFIVDRNGEIVGRYSPNTNPKELEDDIVKLL 158          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPO_LACLM (Glutathione peroxidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gpo PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.785e-12
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            ++VNG  A PLY+FLK    G     IKWNFTKFL+D +G VI R++P T P  +E +IK  L
Sbjct:   95 IKVNGKEAHPLYQFLKKEAKGALSGTIKWNFTKFLIDRDGQVIERFAPKTEPEEMEEEIKKLL 157          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.457e-12
Identity = 36/99 (36.36%), Postives = 50/99 (50.51%), Query Frame = -3
Query:   67 HVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAIN 363
            +VVG + GW           +W   + F  GD L+FN+    H+V  V Q  F+ CNT +     T+    + L   G  YFIC+FPGHC  G K+A+N
Sbjct:    3 YVVGGSGGWTF------NTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLP-KGQSYFICNFPGHCQSGMKIAVN 94          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: BSAA_STAAW (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MW2) GN=bsaA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            + V G +  PL+++L A++ G+F  +IKWNFTKFLVD EGNV+ R++P   P+ IE +I+  L
Sbjct:   96 IDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: BSAA_STAAS (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MSSA476) GN=bsaA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            + V G +  PL+++L A++ G+F  +IKWNFTKFLVD EGNV+ R++P   P+ IE +I+  L
Sbjct:   96 IDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: BSAA_STAAR (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain MRSA252) GN=bsaA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            + V G +  PL+++L A++ G+F  +IKWNFTKFLVD EGNV+ R++P   P+ IE +I+  L
Sbjct:   96 IDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: BSAA_STAAN (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain N315) GN=bsaA PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            + V G +  PL+++L A++ G+F  +IKWNFTKFLVD EGNV+ R++P   P+ IE +I+  L
Sbjct:   96 IDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIEREIEKLL 158          
The following BLAST results are available for this feature:
BLAST of EG358279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
BABL_LILLO7.627e-1338.61Chemocyanin OS=Lilium longiflorum PE=1 SV=1[more]
GPX1_HELAN1.699e-1251.56Glutathione peroxidase 1 OS=Helianthus annuus GN=G... [more]
ENL3_ARATH2.898e-1235.35Early nodulin-like protein 3 OS=Arabidopsis thalia... [more]
BSAA_BACSU2.898e-1251.52Glutathione peroxidase homolog bsaA OS=Bacillus su... [more]
GPO_LACLM3.785e-1250.79Glutathione peroxidase OS=Lactococcus lactis subsp... [more]
BABL_CUCSA6.457e-1236.36Basic blue protein OS=Cucumis sativus PE=1 SV=1[more]
BSAA_STAAW8.433e-1247.62Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAS8.433e-1247.62Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAR8.433e-1247.62Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
BSAA_STAAN8.433e-1247.62Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank description10b3 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358279 ID=EG358279; Name=EG358279; organism=Citrus sinensis; type=EST; length=641bp
ACTACCGCTGGGCTGAGGGGCCGGAGAAGAAGGTTGGGGAGCAGGAGAAG
ATCCCCTGGCGCTAACGTTGATGGCTAATTTCTGACCGCCGAGGCAGTGG
CCTGGAAATGAGCAAATGAAGTAGTGTGGCCCAGAAGCTGTAAGAGTAAC
ACTCGCAGGGCTATTTGTGGTTCTGGATAGGGGACTAGTGGTGTTGCATG
CATTGAATGATGATTGTGTTACTCGAGTAACATCATGGTTTCCAGCGGCA
AAGTTAAACACAAGAGTGTCACCGACGGTGAAGGTCTGGTTTGCAGCCCA
GTTAGAGTAAGTAGCAGGACCATTAGGAGGAACAATCCAGCCTAGTGCAT
CACCCACCACATGCCTTGTCTGTGCCGTCGAGCTCTGTACGCGTCAATGG
TCCAAATGCGGAACCTCTATATAAATTTCTCAAAGCAAGTAAAACTGGAT
ACTTTGGGTCCAGAATAAAGTGGAACTTCACCAAGTTTTTAGTTGATACA
GAAGGAAATGTCATCGGGCGTTATAGCCCAACCACTTCTCCGATGGCAAT
TGAGGGTGACATAAAGAATGCACTGGGAGATGTTTAGGAGATTTCTGGGT
GACTAGTCATTCCTGTGCAAGACATGATATAATAGTGTATG
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