CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.442e-56
Identity = 106/182 (58.24%), Postives = 150/182 (82.42%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK I F + +R A++ GI++L+DAV +T+GP+GRNV+L++ FG+P++VNDGVTIA+ IELADP+EN GA L+REVA+KTND AGDGTTTA++LA+ +++ GL ++++GANPV+L+RGI+KT   LVE++  +A+P+EGR +I  VATISAGND  +G MIA A+D VG DGV+++E S S E
Sbjct:    2 AKQILFREEARKALEQGINQLADAVKVTIGPKGRNVLLEKKFGAPQIVNDGVTIAKEIELADPLENTGAQLMREVATKTNDVAGDGTTTATILAQSMVQEGLKNISAGANPVALRRGIEKTTAYLVEQIAAQAKPVEGRKNIAEVATISAGNDPEVGEMIARAMDAVGRDGVITVEESKSLE 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_ANASL (60 kDa chaperonin 2 OS=Anabaena sp. (strain L31) GN=groL2 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.326e-54
Identity = 106/180 (58.89%), Postives = 145/180 (80.56%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I+FD+ SR A++ G++ L+DAV +TLGP+GRNV+L++ +G+P++VNDG+T+A+ IEL DP+EN GA LI+EVASKT D AGDGTTTA+VL + +IK GL +V +G NPVSLKRGIDKT   LVEE+ K A+P+EG   I  VAT+SAGND+ +G MIA+A+++V  DGV+++E S S
Sbjct:    2 AKIISFDEESRRALERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVASKTKDVAGDGTTTATVLVQALIKEGLKNVAAGINPVSLKRGIDKTTEALVEEIAKVAKPVEG-SAIAQVATVSAGNDEEVGGMIAEAVERVTKDGVITVEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.326e-54
Identity = 106/180 (58.89%), Postives = 144/180 (80.00%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK + FD+ +R A++ GID L++AV +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL + +EN GA LI+EVASKTND AGDGTTTA VLA+ ++K GL +V +G+NP++LKRG++KTV  LV ELEK A+P+EG   I  VA +SAGNDD IG MIA A++ VG +GV+++E S S
Sbjct:    2 AKQVVFDETARRALERGIDALANAVRVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELENKLENTGAQLIKEVASKTNDVAGDGTTTACVLAQSLVKEGLKNVAAGSNPMNLKRGMEKTVRHLVAELEKVAKPVEGSQAIAQVAAVSAGNDDEIGEMIARAMETVGKEGVITVEESKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LEPIN (60 kDa chaperonin OS=Leptospira interrogans GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.037e-54
Identity = 104/182 (57.14%), Postives = 144/182 (79.12%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI +++ +R  +  G++KL++AV +TLGP+GRNVV+D+ FG+P +  DGVT+A+ IEL DP+EN GA +++EV++KTND AGDGTTTA++LA+ II  GL +VT+GANP+SLKRGIDK V   VE ++KRA  IE + DI  VA+ISA ND+ IG +IADA+DKVG DGV+++E + S E
Sbjct:    2 AKDIEYNETARRKLLEGVNKLANAVKVTLGPKGRNVVIDKKFGAPTITKDGVTVAKEIELEDPLENMGAQMVKEVSTKTNDVAGDGTTTATILAQSIINEGLKNVTAGANPMSLKRGIDKAVTAAVESIQKRAVKIENKKDIANVASISANNDNTIGNLIADAMDKVGKDGVITVEEAKSIE 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_DESAP (60 kDa chaperonin OS=Desulforudis audaxviator (strain MP104C) GN=groL PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.967e-54
Identity = 107/179 (59.78%), Postives = 145/179 (81.01%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            +AKDI + + +R AM+ G++ L+DAV +TLGP+GRNVVL++ FGSP +VNDGVTIAR IEL +P EN GA L++EVA+KTND AGDGTTTA+VLA+ I++ GL +VT+GANP+ LKRGI+K V   VEE++ RA+P+E ++ I  VA+ISA ND  IG +IADA++KVG DGV+++E S
Sbjct:    2 AAKDIVYREDARTAMERGVNALADAVRVTLGPKGRNVVLEKKFGSPMIVNDGVTIAREIELENPFENMGAQLVKEVATKTNDIAGDGTTTAAVLAQAIVRAGLKNVTAGANPMILKRGIEKAVERTVEEIKSRAKPVESKEAITQVASISA-NDTTIGNLIADAMEKVGKDGVITVEES 179          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_MOOTA (60 kDa chaperonin 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL2 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.181e-54
Identity = 105/182 (57.69%), Postives = 143/182 (78.57%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK + FD+ +R A++ GI KL++AV +TLGPRGRNVVL++ FG+P + NDGVTIA+ +EL DP+EN GA L+REVASKTND AGDGTTTA VLA+ I++ G+ +V +GANP+ +KRGI+K V  +VE L+ +ARP+E +D I  VA+ISA ND  IG ++ADA++KVG DGV+++E S   E
Sbjct:    2 AKQVVFDREAREALEKGITKLTEAVRVTLGPRGRNVVLEKKFGAPTITNDGVTIAKEVELEDPLENVGALLVREVASKTNDVAGDGTTTACVLAQAIVREGMKNVAAGANPMFMKRGIEKAVAAVVENLKAQARPVETKDSISQVASISA-NDPQIGALVADAMEKVGKDGVITVEESKGME 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LEPIC (60 kDa chaperonin OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=groL PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.767e-54
Identity = 103/182 (56.59%), Postives = 144/182 (79.12%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI +++ +R  +  G++KL++AV +TLGP+GRNVV+D+ FG+P +  DGVT+A+ IEL DP+EN GA +++EV++KTND AGDGTTTA++LA+ II  GL +VT+GANP+SLK+GIDK V   VE ++KRA  IE + DI  VA+ISA ND+ IG +IADA+DKVG DGV+++E + S E
Sbjct:    2 AKDIEYNETARRKLLEGVNKLANAVKVTLGPKGRNVVIDKKFGAPTITKDGVTVAKEIELEDPLENMGAQMVKEVSTKTNDVAGDGTTTATILAQSIINEGLKNVTAGANPMSLKKGIDKAVTAAVESIQKRAVKIENKKDIANVASISANNDNTIGNLIADAMDKVGKDGVITVEEAKSIE 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 6.767e-54
Identity = 105/180 (58.33%), Postives = 144/180 (80.00%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I+FD+ SR A++ G++ L+DAV +TLGP+GRNV+L++ +G+P++VNDG+T+A+ IEL DP+EN GA LI+EVA+KT D AGDGTTTA+VL + +IK GL +V +G+NPVSLKRGIDKT   LV E+ K A+P+EG   I  VAT+SAGND+ +G MIA A++KV  DGV+++E S S
Sbjct:    2 AKIISFDEESRRALERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVAAKTKDVAGDGTTTATVLVQALIKEGLKNVAAGSNPVSLKRGIDKTTEALVAEIAKVAKPVEG-SAIAQVATVSAGNDEEVGAMIAQAVEKVTKDGVITVEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LEPBL (60 kDa chaperonin OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=groL PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.154e-53
Identity = 104/182 (57.14%), Postives = 142/182 (78.02%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI +++ +R  +  G++KL++AV +TLGP+GRNVV+D+ FG+P +  DGVT+A+ IEL D +EN GA +++EV++KTND AGDGTTTA++LA+ II  GL +VT+GANP+SLKRGIDK V   VE + KRA  IE + DI  VA+ISA NDD IG +IADA+DKVG DGV+++E + S E
Sbjct:    2 AKDIEYNETARRKLLEGVNKLANAVKVTLGPKGRNVVIDKKFGAPTITKDGVTVAKEIELEDALENMGAQMVKEVSTKTNDVAGDGTTTATILAQSIINEGLKNVTAGANPMSLKRGIDKAVTAAVESIRKRAVKIENKKDIANVASISANNDDTIGNLIADAMDKVGKDGVITVEEAKSIE 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LEPBJ (60 kDa chaperonin OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=groL PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.154e-53
Identity = 104/182 (57.14%), Postives = 142/182 (78.02%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI +++ +R  +  G++KL++AV +TLGP+GRNVV+D+ FG+P +  DGVT+A+ IEL D +EN GA +++EV++KTND AGDGTTTA++LA+ II  GL +VT+GANP+SLKRGIDK V   VE + KRA  IE + DI  VA+ISA NDD IG +IADA+DKVG DGV+++E + S E
Sbjct:    2 AKDIEYNETARRKLLEGVNKLANAVKVTLGPKGRNVVIDKKFGAPTITKDGVTVAKEIELEDALENMGAQMVKEVSTKTNDVAGDGTTTATILAQSIINEGLKNVTAGANPMSLKRGIDKAVTAAVESIRKRAVKIENKKDIANVASISANNDDTIGNLIADAMDKVGKDGVITVEEAKSIE 183          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_SYNJA9.442e-5658.2460 kDa chaperonin 1 OS=Synechococcus sp. (strain J... [more]
CH602_ANASL2.326e-5458.8960 kDa chaperonin 2 OS=Anabaena sp. (strain L31) G... [more]
CH601_GLOVI2.326e-5458.8960 kDa chaperonin 1 OS=Gloeobacter violaceus GN=gr... [more]
CH60_LEPIN3.037e-5457.1460 kDa chaperonin OS=Leptospira interrogans GN=gro... [more]
CH60_DESAP3.967e-5459.7860 kDa chaperonin OS=Desulforudis audaxviator (str... [more]
CH602_MOOTA5.181e-5457.6960 kDa chaperonin 2 OS=Moorella thermoacetica (str... [more]
CH60_LEPIC6.767e-5456.5960 kDa chaperonin OS=Leptospira interrogans serogr... [more]
CH602_ANAVT6.767e-5458.3360 kDa chaperonin 2 OS=Anabaena variabilis (strain... [more]
CH60_LEPBL1.154e-5357.1460 kDa chaperonin OS=Leptospira borgpetersenii ser... [more]
CH60_LEPBJ1.154e-5357.1460 kDa chaperonin OS=Leptospira borgpetersenii ser... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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