CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_COPPD (60 kDa chaperonin OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=groL PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.475e-50
Identity = 102/181 (56.35%), Postives = 140/181 (77.35%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            +AK IAFD+ +R+ +  G+ KLS AV  TLGP+GR VVL+ +FGSP + NDGVTIA+ I+L DP EN GA L +EVASKTND AGDGTTTA+VLA  +++ G+ +VT+GANP++L+RGI+K V  + EE++K +RP+ G+ DI  VATISA  D  IG++IA+A++KVG DGV+++E   S
Sbjct:    2 AAKLIAFDEEARSKLLTGVLKLSKAVKATLGPKGRYVVLERKFGSPLITNDGVTIAKEIDLEDPYENLGAQLAKEVASKTNDVAGDGTTTATVLAEAMVREGMKNVTAGANPIALRRGIEKAVEAVTEEIKKLSRPVSGKRDITEVATISA-KDQQIGSIIAEAMEKVGKDGVVTVEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BACLD (60 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groL PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.475e-50
Identity = 102/181 (56.35%), Postives = 142/181 (78.45%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AKDI F + +R +M  G+D L+DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV +++GI++ V   VE L++ ++PIEG++ I  VA+ISA  D+ +G++IA+A+++VG DGV++IE S  F
Sbjct:    2 AKDIKFSEEARRSMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPVGVRKGIEQAVAVAVESLKEISKPIEGKESIAQVASISAA-DEEVGSLIAEAMERVGNDGVITIEESKGF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_THENE (60 kDa chaperonin OS=Thermotoga neapolitana GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.539e-50
Identity = 101/181 (55.80%), Postives = 141/181 (77.90%), Query Frame = 1
Query:  199 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            K + F++ +R A++ G+DK+++AV +TLGP+GRNVV+++ +GSP + NDGV+IA+ IEL D  EN GA L++EVASKTND AGDGTTTA+VLA+ +IK GL +V +GANP+ LKRGIDK V   VEE++K ++ + GR+DI  VA ISA N   IG +IA+A+DKVG DGV+++E S + E
Sbjct:    3 KLLKFNEEARRALERGVDKVANAVKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGLKNVAAGANPILLKRGIDKAVERAVEEIKKLSKKLSGREDIAHVAAISA-NSPEIGELIAEAMDKVGEDGVITVEDSKTLE 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NAUPA (60 kDa chaperonin OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.539e-50
Identity = 95/183 (51.91%), Postives = 137/183 (74.86%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ +   +R  + AG++KL+DAV +T+GP+GRNV+L   FG+P +  DGV++A+ IEL  P+EN GA L++EVASKT D AGDGTTTA+VLA  + K GL  +T+GANPV++KRG+DK V  ++ EL+K ++ +E ++ I  VATISA ND  IG +IA+A+DKVG DGV+++E   S +
Sbjct:    2 AAKDVVYSDVARNELLAGVEKLADAVRVTMGPKGRNVLLQRSFGAPHITKDGVSVAKEIELKHPVENMGAQLVKEVASKTADEAGDGTTTATVLAHAVFKEGLKYITAGANPVAVKRGMDKAVEAIIAELKKMSKTVENKEQIAQVATISANNDKKIGELIAEAMDKVGKDGVITVEEGKSLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_EXIS2 (60 kDa chaperonin OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.539e-50
Identity = 103/181 (56.91%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AKDI F + +R AM  G+D L+DAV +T+GP+GRNVVL+ +FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTN+ AGDGTTTA+VLA+ +I+ GL +VT+GANP+ +++GI+K V   VEEL   A+PIEG++ I  VA ISA  D+ +G +IA+A+++VG DGV++IE S  F
Sbjct:    2 AKDILFSEEARRAMLRGVDALADAVKVTIGPKGRNVVLERKFGSPLITNDGVTIAKEIELEDHFENMGAKLVAEVASKTNEIAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGIEKAVRRAVEELHAIAKPIEGKEAIAQVAAISAA-DEEVGQLIAEAMERVGQDGVITIEESRGF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLL2 (60 kDa chaperonin OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.539e-50
Identity = 100/183 (54.64%), Postives = 137/183 (74.86%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKDI FD  +RA ++ G+DKL++AV +TLGP GRNV++D+ FG+P    DGVT+A+ IELAD +EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +V +GA P+ LKRGID+ V  +V EL   +R I G+ +I  V TISA ND  IG +IA+A+DKVG DGV+++E +   +
Sbjct:    2 TAKDIIFDSDARAKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELADAVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVAAGARPIDLKRGIDRAVKEVVAELRNISRSISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMD 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CAMC5 (60 kDa chaperonin OS=Campylobacter curvus (strain 525.92) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.539e-50
Identity = 96/182 (52.75%), Postives = 138/182 (75.82%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I +   +R  +  G+ KL+DAV +T+GPRGRNV++ + FG+P +  DGV++A+ +EL D +EN GA+L+REVASKTND AGDGTTTA+VLA  I K GL +VT+GANP+ +KRG+DK V  L++EL+  A+ + G  +I  +ATISA +D+ IG +IADA++KVG DGV+++E + S E
Sbjct:    2 AKEIFYSDDARNRLYEGVRKLNDAVKVTMGPRGRNVLIQKSFGAPSITKDGVSVAKEVELKDTIENMGASLVREVASKTNDQAGDGTTTATVLAHAIFKEGLRNVTAGANPIEVKRGMDKEVAALIDELKNIAKKVSGSKEIAQIATISANSDESIGKLIADAMEKVGKDGVITVEEAKSIE 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_SACEN (60 kDa chaperonin 2 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=groL2 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.539e-50
Identity = 98/180 (54.44%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK IAFD+++R A++ G+++L+DAV +TLGPRGR+VVLD +FG P+V NDGVTIAR IEL DP EN GA L + VA+KTND AGDGTTTA+VLA+ +++ GL ++ +GANP +L RGI      +V+ L+ +A P++GRD+I  +AT+S+  D+ IG ++ +A+++VG DGV+SIE SS+
Sbjct:    2 AKQIAFDEQARRALERGVNQLADAVKVTLGPRGRHVVLDKQFGGPQVTNDGVTIAREIELEDPYENLGAQLAKNVATKTNDVAGDGTTTATVLAQAMVREGLRNLAAGANPTALGRGIQAATDAVVDALKAKATPVKGRDNIAQIATVSS-RDESIGALVGEAMERVGEDGVISIEESST 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SYNWW (60 kDa chaperonin OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=groL PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.928e-50
Identity = 100/180 (55.56%), Postives = 140/180 (77.78%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            +K+I F + +R A++ G+D L++AV +TLGP+GRNVVLD +FGSP + NDGVTIAR I+L DP EN G  L++EVA KTND AGDGTTTA++LA+ +IK GL +V +GANP+ ++RGID+ V  +V+E++  ++P+E RD I  VA ISA +D  IG +IADA++KVG DGV+++E S S
Sbjct:    3 SKEIKFGEEARRALERGVDTLANAVKVTLGPKGRNVVLDRKFGSPTITNDGVTIARDIDLKDPWENLGCQLVKEVAIKTNDVAGDGTTTATLLAQAMIKEGLKNVAAGANPMIMRRGIDQAVKAVVDEIKTLSKPVESRDSIAQVAAISA-DDPEIGQLIADAMEKVGRDGVITVEESQS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_DESRM (60 kDa chaperonin OS=Desulfotomaculum reducens (strain MI-1) GN=groL PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.928e-50
Identity = 99/178 (55.62%), Postives = 141/178 (79.21%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AK+I F + +R A++ G++ L++AV +TLGP+GRNVV+++ FG+P + NDGVTIAR IEL D  EN GA L++EVA+KTND AGDGTTTA+VLA+ +++ GL +V +GANP+ +KRGI+K V   VEE++  A+PIE ++ I  VAT+SA NDD IG +IA+A++KVG DGV+++E S
Sbjct:    2 AKEIIFREDARRALERGVNALAEAVKVTLGPKGRNVVIEKKFGAPTITNDGVTIAREIELEDNFENMGAQLVKEVATKTNDVAGDGTTTATVLAQALVREGLKNVAAGANPMIIKRGIEKAVEKAVEEIKAMAKPIESKEAIAQVATVSA-NDDSIGNLIAEAMEKVGKDGVITVEES 178          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_COPPD3.475e-5056.3560 kDa chaperonin OS=Coprothermobacter proteolytic... [more]
CH60_BACLD3.475e-5056.3560 kDa chaperonin OS=Bacillus licheniformis (strai... [more]
CH60_THENE4.539e-5055.8060 kDa chaperonin OS=Thermotoga neapolitana GN=gro... [more]
CH60_NAUPA4.539e-5051.9160 kDa chaperonin OS=Nautilia profundicola (strain... [more]
CH60_EXIS24.539e-5056.9160 kDa chaperonin OS=Exiguobacterium sibiricum (st... [more]
CH60_CHLL24.539e-5054.6460 kDa chaperonin OS=Chlorobium limicola (strain D... [more]
CH60_CAMC54.539e-5052.7560 kDa chaperonin OS=Campylobacter curvus (strain ... [more]
CH602_SACEN4.539e-5054.4460 kDa chaperonin 2 OS=Saccharopolyspora erythraea... [more]
CH60_SYNWW5.928e-5055.5660 kDa chaperonin OS=Syntrophomonas wolfei subsp. ... [more]
CH60_DESRM5.928e-5055.6260 kDa chaperonin OS=Desulfotomaculum reducens (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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