CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NATTJ (60 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groL PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.011e-49
Identity = 98/182 (53.85%), Postives = 143/182 (78.57%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F + +RA ++ G++KL+D + +TLGP+GRNVVLD+ FGSP++ NDGVTIAR I+L D  EN GA L++EVA++TND AGDGTTTA++LA+ ++  G+ +VT+GANP+ +++GI K V   VEEL+K A  +E ++ I  VA+ISA ND+ +G +IA+A++KVG DGV+++E S SF+
Sbjct:    2 AKDIKFREDARARLEQGVNKLADTLKVTLGPKGRNVVLDKKFGSPQITNDGVTIARDIDLEDNYENMGAQLVKEVATQTNDVAGDGTTTATILAQAMVNEGIKNVTAGANPMIIRKGIQKAVDRAVEELQKNAVSVEDKESISQVASISA-NDEEVGKLIAEAMEKVGKDGVITVEESKSFK 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLONN (60 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groL PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.011e-49
Identity = 101/180 (56.11%), Postives = 142/180 (78.89%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I F + SR AMQAG+DKL++AV +TLGP+GRNVVLD+ FG+P + NDGVTIA+ IEL D  EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ +++GI   V   VE+++K ++ ++G++DI  VA ISA  D  IG +IADA++KVG +GV+++E S++
Sbjct:    2 AKSILFGEESRRAMQAGVDKLANAVKVTLGPKGRNVVLDKKFGAPLITNDGVTIAKEIELEDMYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRKGIKLAVDTAVEQIKKSSKQVDGKEDIARVAAISAA-DPEIGKLIADAMEKVGNEGVITVEESNT 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BACCN (60 kDa chaperonin OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=groL PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.011e-49
Identity = 102/181 (56.35%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AKDI F + +R +M  G+D L++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   VEEL+  ++PIEG+  I  VA ISA  D+ +G +IA+A+++VG DGV+++E S  F
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVATAVEELKTISKPIEGKSSIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_MESSB (60 kDa chaperonin 2 OS=Mesorhizobium sp. (strain BNC1) GN=groL2 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.011e-49
Identity = 98/183 (53.55%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G+D L++AV +TLGP+GRNVV+D+ FG+P++  DGVT+A+ IEL D  EN GA ++REVASKTND+AGDGTTTA+VL + I+K G  +V SG NP+ LKRGIDK V  +VEEL+K AR +   D+I  V TISA  D  IG  +A A++KVG +GV+++E + + E
Sbjct:    2 AAKDVKFHSDARERMLRGVDVLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDAAGDGTTTATVLTQAIVKEGAKAVASGMNPMDLKRGIDKAVEAIVEELKKNARKVTKNDEIAQVGTISANGDQEIGRFLAQAMEKVGNEGVITVEEAKTAE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_STRAW (60 kDa chaperonin 1 OS=Streptomyces avermitilis GN=groL1 PE=3 SV=3)

HSP 1 Score: 196.823 bits (499), Expect = 1.011e-49
Identity = 98/181 (54.14%), Postives = 140/181 (77.35%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK + FD+ +R A++ G++KL+D V +T+GP+GRNVV+D+ FG+P + NDGVTIAR +E+ DP EN GA L++EVA+KTND AGDGTTTA+VLA+ +++ GL +V +GA+P  LK+GID  V  + EEL   ARPI+ + DI AVA +SA  D  +G +IA+A+DKVG DGV+++E S++F
Sbjct:    2 AKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVEVEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPALLKKGIDAAVKAVSEELLATARPIDEKSDIAAVAGLSA-QDSQVGELIAEAMDKVGKDGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LACRJ (60 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groL PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.321e-49
Identity = 98/178 (55.06%), Postives = 138/178 (77.53%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AK+I F + +R+AM +G+DKL+D V  T+GP+GRNVVL++ +G+P + NDGVTIA++IEL +  EN GA L+ EVASKTND AGDGTTTA+VL + I+  G+ +VTSGANPV ++RGIDK     VE L+K +  ++ +DDI+ +A+ISA N + +G +IADA++KVG DGV++IE S
Sbjct:    2 AKEIKFSEDARSAMLSGVDKLADTVKTTMGPKGRNVVLEQSYGTPTITNDGVTIAKSIELENQFENMGAKLVAEVASKTNDIAGDGTTTATVLTQAIVNAGMKNVTSGANPVGIRRGIDKATEVAVEALKKMSHDVKTKDDIEQIASISAANPE-VGKLIADAMEKVGHDGVITIEDS 178          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LACRD (60 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groL PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.321e-49
Identity = 98/178 (55.06%), Postives = 138/178 (77.53%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AK+I F + +R+AM +G+DKL+D V  T+GP+GRNVVL++ +G+P + NDGVTIA++IEL +  EN GA L+ EVASKTND AGDGTTTA+VL + I+  G+ +VTSGANPV ++RGIDK     VE L+K +  ++ +DDI+ +A+ISA N + +G +IADA++KVG DGV++IE S
Sbjct:    2 AKEIKFSEDARSAMLSGVDKLADTVKTTMGPKGRNVVLEQSYGTPTITNDGVTIAKSIELENQFENMGAKLVAEVASKTNDIAGDGTTTATVLTQAIVNAGMKNVTSGANPVGIRRGIDKATEVAVEALKKMSHDVKTKDDIEQIASISAANPE-VGKLIADAMEKVGHDGVITIEDS 178          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLAMS (60 kDa chaperonin OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=groL PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.321e-49
Identity = 100/181 (55.25%), Postives = 143/181 (79.01%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G++ L+DAV +TLGPRGRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GA+P+SLKRGI+K V  + EEL+  A+ IE +++I A A+ISAG D  IG +IA+AIDKVG +GV+++E S++F
Sbjct:    2 AKIIAFDEEARRGLERGLNILADAVRVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIELDDPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIEKAVAAVTEELKAAAKEIETKEEIAATASISAG-DSTIGAIIAEAIDKVGKEGVVTVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLAM3 (60 kDa chaperonin OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=groL PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.321e-49
Identity = 100/181 (55.25%), Postives = 143/181 (79.01%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G++ L+DAV +TLGPRGRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GA+P+SLKRGI+K V  + EEL+  A+ IE +++I A A+ISAG D  IG +IA+AIDKVG +GV+++E S++F
Sbjct:    2 AKIIAFDEEARRGLERGLNILADAVRVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIELDDPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIEKAVAAVTEELKAAAKEIETKEEIAATASISAG-DSTIGAIIAEAIDKVGKEGVVTVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLCH (60 kDa chaperonin OS=Chlorobium chlorochromatii (strain CaD3) GN=groL PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.321e-49
Identity = 100/183 (54.64%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKDI FD  +RA ++ G+DKL++AV +TLGP GRNV++D+ FG+P    DGVT+A+ IELAD +EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +VT+GA P+ LKRGID+ V  +V EL+  +R I  + +I  V TISA ND  IG +IA+A++KVG DGV+++E +   E
Sbjct:    2 TAKDIFFDTDARAKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELADAVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVTAGARPIDLKRGIDRAVKEVVAELKAISRSISSKKEIAQVGTISANNDPEIGELIAEAMEKVGKDGVITVEEAKGME 184          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_NATTJ1.011e-4953.8560 kDa chaperonin OS=Natranaerobius thermophilus (... [more]
CH60_CLONN1.011e-4956.1160 kDa chaperonin OS=Clostridium novyi (strain NT)... [more]
CH60_BACCN1.011e-4956.3560 kDa chaperonin OS=Bacillus cereus subsp. cytoto... [more]
CH602_MESSB1.011e-4953.5560 kDa chaperonin 2 OS=Mesorhizobium sp. (strain B... [more]
CH601_STRAW1.011e-4954.1460 kDa chaperonin 1 OS=Streptomyces avermitilis GN... [more]
CH60_LACRJ1.321e-4955.0660 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH60_LACRD1.321e-4955.0660 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH60_CLAMS1.321e-4955.2560 kDa chaperonin OS=Clavibacter michiganensis sub... [more]
CH60_CLAM31.321e-4955.2560 kDa chaperonin OS=Clavibacter michiganensis sub... [more]
CH60_CHLCH1.321e-4954.6460 kDa chaperonin OS=Chlorobium chlorochromatii (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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