CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH603_ANAVT (60 kDa chaperonin 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL3 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.321e-49
Identity = 95/179 (53.07%), Postives = 139/179 (77.65%), Query Frame = 1
Query:  199 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            K I +   +R  ++ G D L++AV +TLGP+GRN+VL++ FG+P++VNDGVTIA+ IEL DP EN G +L+R+ ASKTND AGDGTTTA VLA  ++K GL +VT+GA+P+++KRGIDK    ++E++++ ARPI+   DI+ VATISAGND  +G ++A+A+++VG +GV+S+E   S
Sbjct:    3 KTILYKDTARWTLEKGFDALTEAVAVTLGPKGRNIVLEKKFGAPQIVNDGVTIAKEIELEDPAENTGISLLRQAASKTNDVAGDGTTTAIVLAHAMLKEGLRNVTAGADPLTVKRGIDKATEFVIEKIQEHARPIKDSRDIEQVATISAGNDPEVGRIVAEAMERVGKEGVISLEEGRS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_PROM2 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9215) GN=groL2 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.321e-49
Identity = 96/180 (53.33%), Postives = 140/180 (77.78%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +++++R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GAN ++LK+GIDK    LV +++  ++PI   + I    TI+AGND+ +G MIA+A+DKVG +GV+S+E   S
Sbjct:    2 AKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGIDKATEFLVGKIQDNSKPISDSNAIAQCGTIAAGNDEEVGQMIANAMDKVGKEGVISLEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_GRAFK (60 kDa chaperonin OS=Gramella forsetii (strain KT0803) GN=groL PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49
Identity = 98/183 (53.55%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPI-EGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI FD ++R  ++ G+D L++AV +TLGP+GRNV++ + FG+P V  DGVT+A+ IEL DP+EN GA +++EVASKTND AGDGTTTA+VLA+ I++ GL +V +GANP+ LKRGIDK V  L  +L K+ + + +  + IK VA+ISA NDD+IG +IA A  KVG +GV+++E +   E
Sbjct:    2 AKDIKFDIQARNGIKRGVDALANAVKVTLGPKGRNVIISKSFGAPTVTKDGVTVAKEIELEDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVQEGLKNVAAGANPMDLKRGIDKAVEALTADLAKQTKEVGDSSEKIKQVASISANNDDMIGDLIAQAFGKVGKEGVITVEEAKGTE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLOB8 (60 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groL PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49
Identity = 100/180 (55.56%), Postives = 140/180 (77.78%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK + F + +R +MQ G+DKL+D V +TLGP+GRNVVLD+ FG+P + NDGV+IAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI   V   VEE++K ++ ++G++DI  VA ISA  D+ +G +IADA++KVG +GV++IE S S
Sbjct:    2 AKMLKFGEDARRSMQIGVDKLADTVKVTLGPKGRNVVLDKKFGAPLITNDGVSIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPILIRTGIKMAVDKAVEEIQKISKQVDGKEDIARVAAISAA-DEEVGKLIADAMEKVGNEGVITIEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BACWK (60 kDa chaperonin OS=Bacillus weihenstephanensis (strain KBAB4) GN=groL PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49
Identity = 100/181 (55.25%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AKDI F + +R +M  G+D L++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GI+K V   +EEL+  ++PIEG+  I  VA IS+  D+ +G +IA+A+++VG DGV+++E S  F
Sbjct:    2 AKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVTAAIEELKAISKPIEGKSSIAQVAAISSA-DEEVGQLIAEAMERVGNDGVITLEESKGF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BACSU (60 kDa chaperonin OS=Bacillus subtilis GN=groL PE=1 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49
Identity = 100/181 (55.25%), Postives = 141/181 (77.90%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK+I F + +R AM  G+D L+DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV +++G+++ V   +E L++ ++PIEG++ I  VA ISA  D+ +G++IA+A+++VG DGV++IE S  F
Sbjct:    2 AKEIKFSEEARRAMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPVGVRKGMEQAVAVAIENLKEISKPIEGKESIAQVAAISAA-DEEVGSLIAEAMERVGNDGVITIEESKGF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BACSK (60 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groL PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49
Identity = 101/181 (55.80%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AKDI F + +R +M  G+D L++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VTSGANP+ +++GI+K     V+EL+  ++PIEGR+ I  VA IS+  D+ +G +IA+A+++VG DGV++IE S  F
Sbjct:    2 AKDIQFSEEARRSMLKGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVTSGANPMGIRKGIEKATAAAVKELKAISKPIEGRESIAQVAAISSA-DEEVGQIIAEAMERVGNDGVITIEESKGF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_AKKM8 (60 kDa chaperonin OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=groL PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49
Identity = 98/182 (53.85%), Postives = 135/182 (74.18%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK I FD+ +R A+  G+++++ AV  TLGP GRNVV+D+ FGSP +  DGVT+A+ IEL DP EN GA L+REV+SKTND AGDGTTTA+VLA  I + GL +VT+GANP+SL+RGI K    +VEEL+K ++P++   ++  VAT+SA  D  IG +IA+A+DKVG DG +++E +   E
Sbjct:    2 AKQIQFDETARQALLRGVEQIAKAVKSTLGPAGRNVVIDKKFGSPLITKDGVTVAKEIELEDPFENMGAQLVREVSSKTNDVAGDGTTTATVLAESIYREGLRNVTAGANPISLQRGIMKAADSVVEELKKISKPVDSSKEVAQVATVSANWDAEIGNIIAEAMDKVGKDGTITVEEAKGIE 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49
Identity = 98/183 (53.55%), Postives = 136/183 (74.32%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            ++KD+ F   +RA + +GID L+DAV +TLGP+GRNVV+D+ FG+P++  DGVT+A+ IEL+D  EN GA L+REVASKTND AGDGTTTA+VLA+ I++ GL +V +G NP  +KRGID     ++EEL  R RPI  R++   VATISA  +  IG +I++A+ KVG DGV+++E +  FE
Sbjct:    2 ASKDVKFAGDARARLLSGIDTLADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELSDKFENLGAQLLREVASKTNDLAGDGTTTATVLAQSIVREGLKAVAAGFNPQDVKRGIDHATTAVIEELRTRTRPIATREETAQVATISANGEVEIGRIISEAVQKVGKDGVITVEEAKGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_STRCO (60 kDa chaperonin 1 OS=Streptomyces coelicolor GN=groL1 PE=3 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49
Identity = 97/181 (53.59%), Postives = 140/181 (77.35%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK + FD+ +R A++ G++KL+D V +T+GP+GRNVV+D+ FG+P + NDGVTIAR +E+ DP EN GA L++EVA+KTND AGDGTTTA+VLA+ +++ GL +V +GA+P  LK+GID  V  + E+L   ARPI+ + DI AVA +SA  D  +G +IA+A+DKVG DGV+++E S++F
Sbjct:    2 AKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVEVEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPALLKKGIDAAVAAVSEDLLATARPIDEKSDIAAVAALSA-QDQQVGELIAEAMDKVGKDGVITVEESNTF 181          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH603_ANAVT1.321e-4953.0760 kDa chaperonin 3 OS=Anabaena variabilis (strain... [more]
CH602_PROM21.321e-4953.3360 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH60_GRAFK1.725e-4953.5560 kDa chaperonin OS=Gramella forsetii (strain KT0... [more]
CH60_CLOB81.725e-4955.5660 kDa chaperonin OS=Clostridium beijerinckii (str... [more]
CH60_BACWK1.725e-4955.2560 kDa chaperonin OS=Bacillus weihenstephanensis (... [more]
CH60_BACSU1.725e-4955.2560 kDa chaperonin OS=Bacillus subtilis GN=groL PE=... [more]
CH60_BACSK1.725e-4955.8060 kDa chaperonin OS=Bacillus clausii (strain KSM-... [more]
CH60_AKKM81.725e-4953.8560 kDa chaperonin OS=Akkermansia muciniphila (stra... [more]
CH602_GLUDA1.725e-4953.5560 kDa chaperonin 2 OS=Gluconacetobacter diazotrop... [more]
CH601_STRCO1.725e-4953.5960 kDa chaperonin 1 OS=Streptomyces coelicolor GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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