CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_PROAC (60 kDa chaperonin 2 OS=Propionibacterium acnes GN=groL2 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.942e-49
Identity = 97/182 (53.30%), Postives = 138/182 (75.82%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            +AK + FD+ +R +++ G+D L+D V +TLGP+GR VVLD+ +G+P + NDGVT+A+ ++L DP EN GA L +EVA+KTND AGDGTTTA+VLA+ ++  GL +V SGANPV LKRGI+K V  +VEEL   +R I+   D+ +VATIS+  D+ IG +IA+A DKVG DGV++++ S +F
Sbjct:    2 AAKQLQFDEEARRSLERGVDTLADTVKVTLGPKGRYVVLDKKWGAPTITNDGVTVAKEVDLTDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVHEGLRAVASGANPVGLKRGIEKAVDAVVEELRSISRAIDTTSDMASVATISS-RDETIGALIAEAFDKVGKDGVITVDESQTF 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_ANASL (60 kDa chaperonin 1 OS=Anabaena sp. (strain L31) GN=groL1 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.942e-49
Identity = 100/180 (55.56%), Postives = 135/180 (75.00%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +++ +R A++ GID L++AV +TLGP+GRNVVL++ +G+P++VNDGVTIA+ IEL D +EN G ALIR+ ASKTND AGDGTTTA+VLA  I+K GL +V +GAN + LKRGIDK  + LV+ + + AR +E    I  V  ISAGNDD +  MIA+A+DKVG + V+S+E   S
Sbjct:    2 AKRIIYNENARRALERGIDILAEAVAVTLGPKGRNVVLEKKYGAPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAHAIVKEGLRNVAAGANAILLKRGIDKATNFLVDRIREHARSVEDSKAIAQVGAISAGNDDEVRQMIAEALDKVGKEAVISLEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PROVI (60 kDa chaperonin OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=groL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.842e-49
Identity = 98/183 (53.55%), Postives = 136/183 (74.32%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKDI FD  +RA ++ G+DKL++AV +TLGP GRNV++D+ FG+P    DGVT+A+ +EL D +EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +V +GA P+ LKRGID+ V  +V EL   +R I G+ +I  V TISA ND  IG +IA+A+DKVG DGV+++E +   +
Sbjct:    2 TAKDILFDADARAKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEVELEDAIENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVAAGARPIDLKRGIDRAVKEVVAELRTISRSISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMD 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PELLD (60 kDa chaperonin OS=Pelodictyon luteolum (strain DSM 273) GN=groL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.842e-49
Identity = 99/183 (54.10%), Postives = 135/183 (73.77%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKDI FD  +RA ++ G+DKL++ V +TLGP GRNV++D+ FG+P    DGVT+A+ IEL D +EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +V +GA P+ LKRGID+ V  +V EL   +R I G+ +I  V TISA ND  IG +IA+A+DKVG DGV+++E +   E
Sbjct:    2 TAKDILFDADARAKLKVGVDKLANTVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELDDAIENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVAAGARPIDLKRGIDRAVKEVVAELRNISRSISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGME 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ODOSI (60 kDa chaperonin, chloroplastic OS=Odontella sinensis GN=groL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.842e-49
Identity = 97/176 (55.11%), Postives = 138/176 (78.41%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIE 720
            AK I +   +R A++ G++ + +AV +TLGP+GRNVVL++ +GSP++VNDGVTIA+ I L D +EN G ALIR+ ASKTND AGDGTTTA+VLA  ++K GL +VT+GANP+S+K G++K    LV ++ + A+P+E    I+ VA+ISAGND+LIG++IADA+ KVG +GV+S+E
Sbjct:    2 AKKILYQDNARRALERGMEIMVEAVSVTLGPKGRNVVLEKPYGSPQIVNDGVTIAKEINLEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAYAMVKEGLKNVTAGANPISIKLGMEKATQYLVTQINEFAQPVEDIQSIEQVASISAGNDNLIGSLIADALSKVGKEGVISLE 177          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HAHCH (60 kDa chaperonin OS=Hahella chejuensis (strain KCTC 2396) GN=groL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.842e-49
Identity = 99/183 (54.10%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M AG++ L+DAV +TLGP+GRNVVLD+ FG+P V  DGV++A+ IEL D  EN GA +++EVASKTND AGDGTTTA+VLA+ I+  GL SV +G NP+ LKRGIDK V   V+E++  +RP E    I  V TISA +D+ IG +IA+A++KVG +GV+++E  S  E
Sbjct:    2 AAKDVKFGDSARKRMVAGVNTLADAVKVTLGPKGRNVVLDKSFGAPTVTKDGVSVAKEIELKDKFENMGAQMVKEVASKTNDEAGDGTTTATVLAQAILNEGLKSVAAGMNPMDLKRGIDKAVIAAVKEIKNISRPCEDSKSIAQVGTISANSDERIGNIIAEAMEKVGKEGVITVEEGSGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLPB (60 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groL PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.842e-49
Identity = 99/183 (54.10%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            SAKDI FD  +RA ++ G+DKL+DAV +TLGP GRNV++D+ FG+P    DGVT+A+ IEL D  EN GA ++REV+SKT+D AGDGTTTA+VLA+ I + GL +V +GA P+ LKRGIDK V  ++ EL   +  I G+ +I  V TISA ND  IG +IADA++KVG DGV+++E +   +
Sbjct:    2 SAKDILFDASARAKLKVGVDKLADAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELEDSFENMGAQMVREVSSKTSDVAGDGTTTATVLAQAIYREGLKNVAAGARPIDLKRGIDKAVKEVIGELRTISNDISGKIEIAQVGTISANNDPEIGQLIADAMEKVGKDGVITVEEAKGMD 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_ARTS2 (60 kDa chaperonin 1 OS=Arthrobacter sp. (strain FB24) GN=groL1 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.842e-49
Identity = 100/181 (55.25%), Postives = 142/181 (78.45%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G++ L+DAV +TLGPRGRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ ++K GL +V +GA+P+SLKRGI+K V  +  EL   A+ IE +++I A A+ISAG DD IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKIIAFDEEARRGLERGLNILADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIELDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPLSLKRGIEKAVEAVTAELLASAKEIETKEEIAATASISAG-DDEIGALIAEALDKVGKEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_TSUTY (60 kDa chaperonin OS=Tsukamurella tyrosinosolvens GN=groL PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.018e-49
Identity = 98/181 (54.14%), Postives = 140/181 (77.35%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+++R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP+ LKRGI+K V  + E L K A+ +E +D I A A ISAG D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKTIAFDKKARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEAVTEHLLKAAKEVETKDQIAATAGISAG-DPAIGELIAEAMDKVGKEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_STACT (60 kDa chaperonin OS=Staphylococcus carnosus (strain TM300) GN=groL PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.018e-49
Identity = 100/181 (55.25%), Postives = 141/181 (77.90%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK+I F + +R +M  G+D+L++AV +T+GP+GRNVVLD E+G+P + NDGVTIA+ IEL DP EN GA L++EVA+KTN+ AGDGTTTA+VLA+ +I+ GL +VTSGANPV L++GIDK V   V+ L ++++ +E +++I  V  ISA  D+ IG  I++A+DKVG DGV+SIE S+ F
Sbjct:    2 AKEIKFSEDARQSMLRGVDQLANAVKVTIGPKGRNVVLDKEYGAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRKGIDKAVTEAVKSLHEQSQKVENKNEIAQVGAISAA-DEEIGQYISEAMDKVGNDGVISIEESNGF 181          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_PROAC2.942e-4953.3060 kDa chaperonin 2 OS=Propionibacterium acnes GN=... [more]
CH601_ANASL2.942e-4955.5660 kDa chaperonin 1 OS=Anabaena sp. (strain L31) G... [more]
CH60_PROVI3.842e-4953.5560 kDa chaperonin OS=Prosthecochloris vibrioformis... [more]
CH60_PELLD3.842e-4954.1060 kDa chaperonin OS=Pelodictyon luteolum (strain ... [more]
CH60_ODOSI3.842e-4955.1160 kDa chaperonin, chloroplastic OS=Odontella sine... [more]
CH60_HAHCH3.842e-4954.1060 kDa chaperonin OS=Hahella chejuensis (strain KC... [more]
CH60_CHLPB3.842e-4954.1060 kDa chaperonin OS=Chlorobium phaeobacteroides (... [more]
CH601_ARTS23.842e-4955.2560 kDa chaperonin 1 OS=Arthrobacter sp. (strain FB... [more]
CH60_TSUTY5.018e-4954.1460 kDa chaperonin OS=Tsukamurella tyrosinosolvens ... [more]
CH60_STACT5.018e-4955.2560 kDa chaperonin OS=Staphylococcus carnosus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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