CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.554e-49
Identity = 98/180 (54.44%), Postives = 139/180 (77.22%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK+I F + +R +++AG++KL+D V +TLGP+GRNV++D+ FGSP + NDGVTIAR IEL D  EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +V +GANP+ LK+GI K V   VEEL+  ++ +EG++ I  +  +SA  D+ IG +IADA++KVG DGV+++E S S
Sbjct:    2 AKEIKFAEEARRSLEAGVNKLADTVKVTLGPKGRNVIIDKKFGSPLITNDGVTIAREIELEDAYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVAAGANPMILKKGIQKAVDVAVEELKNTSQKVEGKEAIAQIGAVSAA-DEEIGQLIADAMEKVGNDGVITVEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_THEFY (60 kDa chaperonin 2 OS=Thermobifida fusca (strain YX) GN=groL2 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.554e-49
Identity = 99/180 (55.00%), Postives = 136/180 (75.56%), Query Frame = 1
Query:  199 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            K + FD+ +R A++ G+++L+DAV +TLGP+GRNVV+D+ +G+P + NDGVT+AR +EL DP EN GA L++EVA+KTND+AGDGTTTA+VLA+ ++  GL SV +GA+P+ LKRGID     + E L  RAR I+ R DI  VAT SA  D  IG +IA+A DKVG DGV+++E S +F
Sbjct:    3 KILEFDESARRALERGVNRLADAVKVTLGPKGRNVVIDKKWGAPTITNDGVTVAREVELEDPYENLGAQLVKEVATKTNDAAGDGTTTATVLAQALVNEGLRSVAAGASPILLKRGIDAAAQAVSETLLSRAREIDERGDIAYVATNSA-QDKQIGELIAEAFDKVGKDGVITVEESQTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_CORJK (60 kDa chaperonin 2 OS=Corynebacterium jeikeium (strain K411) GN=groL2 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.554e-49
Identity = 102/182 (56.04%), Postives = 133/182 (73.08%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +K IAFDQ +R  +Q G+D L+DAV +TLGPRGRNVVLD+ FG P V NDGVTIAR I+L DP EN GA L++ VA KTND AGDGTTTA++LA+ ++  GL +V +GANP+++ RGI K    +VE L + A+P+     I  VAT+S+  D+ IG M+ADA DKVG DGV+++E S S E
Sbjct:    2 SKLIAFDQEAREGLQKGVDALADAVKVTLGPRGRNVVLDKAFGGPTVTNDGVTIARDIDLEDPFENLGAQLVKSVAIKTNDIAGDGTTTATLLAQALVNEGLRTVAAGANPIAVNRGIAKGTERVVELLRELAQPVADNAAIANVATVSS-RDEKIGAMVADAFDKVGKDGVVTVEESQSIE 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_ARTAT (60 kDa chaperonin 1 OS=Arthrobacter aurescens (strain TC1) GN=groL1 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.554e-49
Identity = 99/181 (54.70%), Postives = 143/181 (79.01%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G++ L+DAV +TLGPRGRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ ++K GL +V +GA+P+SLKRGI+K V  ++ EL   A+ IE +++I A A+ISAG D  IG++IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKIIAFDEEARRGLERGLNILADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIELDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPLSLKRGIEKAVEAVISELLASAKEIETKEEIAATASISAG-DPEIGSLIAEALDKVGKEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_EXISA (60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groL PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.560e-49
Identity = 102/181 (56.35%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AKDI F + +R AM  G+D L+DAV +T+GP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTN+ AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GIDK V   +EEL+  ++PIE ++ I  VA ISA  D+ +G +IA+A+++VG DGV++IE S  F
Sbjct:    2 AKDIKFSEDARHAMLRGVDALADAVKVTIGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDRFENMGAKLVAEVASKTNEVAGDGTTTATVLAQAMIREGLKNVTAGANPMILRKGIDKAVTRALEELKAISKPIESKEAIAQVAAISAA-DEEVGELIAEAMERVGNDGVITIEESRGF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLOK5 (60 kDa chaperonin OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=groL PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.560e-49
Identity = 99/180 (55.00%), Postives = 140/180 (77.78%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I F + +R  MQ G+DKL++ V +TLGP+GRNVVLD+ FGSP + NDGVTIA+ IEL +P EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ +++GI   V   VEE++K +R + G++DI  +A ISA +D+ IG +IADA++KVG +GV+++E S +
Sbjct:    2 AKSILFSEDARKKMQEGVDKLANTVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEIELEEPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRQGIKIAVDKAVEEIKKVSRTVNGKEDIARIAAISA-SDEEIGKLIADAMEKVGNEGVITVEESKT 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLOK1 (60 kDa chaperonin OS=Clostridium kluyveri (strain NBRC 12016) GN=groL PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.560e-49
Identity = 99/180 (55.00%), Postives = 140/180 (77.78%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I F + +R  MQ G+DKL++ V +TLGP+GRNVVLD+ FGSP + NDGVTIA+ IEL +P EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ +++GI   V   VEE++K +R + G++DI  +A ISA +D+ IG +IADA++KVG +GV+++E S +
Sbjct:    2 AKSILFSEDARKKMQEGVDKLANTVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEIELEEPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRQGIKIAVDKAVEEIKKVSRTVNGKEDIARIAAISA-SDEEIGKLIADAMEKVGNEGVITVEESKT 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLOCE (60 kDa chaperonin OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=groL PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.560e-49
Identity = 96/180 (53.33%), Postives = 142/180 (78.89%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK+I F + +R +++ G+++L+D V +TLGP+GRNVVLD+ FGSP + NDGVTIA+ +EL D  EN GA L++EVA+KTND AGDGTTTA++LA+ II+ G+ +V +GANP+ LK+G+ K V   V  +++ +R ++G++DI  VATISA N++LIGT+IADA++KV  DGV+++E S +
Sbjct:    2 AKEIKFGEEARRSLEKGVNQLADTVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEVELEDKFENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGMKNVAAGANPMILKKGLQKAVDTAVAGIKENSRKVKGKEDIARVATISA-NEELIGTLIADAMEKVTNDGVITVEESKT 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CAMC1 (60 kDa chaperonin OS=Campylobacter concisus (strain 13826) GN=groL PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.560e-49
Identity = 93/182 (51.10%), Postives = 137/182 (75.27%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I +   +R  +  G+ KL+DAV +T+GPRGRNV++ + FG+P +  DGV++A+ +EL D +EN GA+L+REVASKTND AGDGTTTA+VLA  I K GL +VT+GANP+ +KRG+DK V  L++ L+  ++ + G  +I  +ATISA +D+ IG +IADA++KVG DGV+++E + S +
Sbjct:    2 AKEIFYSDDARNRLYEGVKKLNDAVKVTMGPRGRNVLIQKSFGAPNITKDGVSVAKEVELKDTIENMGASLVREVASKTNDQAGDGTTTATVLAHAIFKEGLRNVTAGANPIEVKRGMDKEVAALIDALKNISKKVSGSKEIAQIATISANSDESIGKLIADAMEKVGKDGVITVEEAKSIQ 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BORGA (60 kDa chaperonin OS=Borrelia garinii GN=groL PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.560e-49
Identity = 97/182 (53.30%), Postives = 139/182 (76.37%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F++ +R ++ +G++KLS+AV +TLGP+GRNV++D+ FGSP V  DGV++AR IEL +P EN GA L++EVA KTND AGDGTTTA+VLA  I + GL +V+SG NP+ +K+GID  V+   E++ + A+ I  +++I  VA+ISA ND  IG  IA+A+DKVG DGV+++E S +F+
Sbjct:    2 AKDIYFNEDARKSLLSGVEKLSNAVKVTLGPKGRNVLIDKKFGSPTVTKDGVSVAREIELENPFENMGAQLLKEVAIKTNDVAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVNLAAEKIRQSAKKITTKEEIAQVASISANNDSYIGEKIAEAMDKVGKDGVITVEESKTFD 183          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_ALKOO6.554e-4954.4460 kDa chaperonin OS=Alkaliphilus oremlandii (stra... [more]
CH602_THEFY6.554e-4955.0060 kDa chaperonin 2 OS=Thermobifida fusca (strain ... [more]
CH602_CORJK6.554e-4956.0460 kDa chaperonin 2 OS=Corynebacterium jeikeium (s... [more]
CH601_ARTAT6.554e-4954.7060 kDa chaperonin 1 OS=Arthrobacter aurescens (str... [more]
CH60_EXISA8.560e-4956.3560 kDa chaperonin OS=Exiguobacterium sp. (strain A... [more]
CH60_CLOK58.560e-4955.0060 kDa chaperonin OS=Clostridium kluyveri (strain ... [more]
CH60_CLOK18.560e-4955.0060 kDa chaperonin OS=Clostridium kluyveri (strain ... [more]
CH60_CLOCE8.560e-4953.3360 kDa chaperonin OS=Clostridium cellulolyticum (s... [more]
CH60_CAMC18.560e-4951.1060 kDa chaperonin OS=Campylobacter concisus (strai... [more]
CH60_BORGA8.560e-4953.3060 kDa chaperonin OS=Borrelia garinii GN=groL PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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