CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH603_ACAM1 (60 kDa chaperonin 3 OS=Acaryochloris marina (strain MBIC 11017) GN=groL3 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.118e-48
Identity = 93/182 (51.10%), Postives = 138/182 (75.82%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK I +D  +R A++ GID L++AV +TLGPRGRNVVL++ FG P++VNDG+TIA+ IEL +P+ N G AL+R+VA+KTND+AGDGTTTA VL+  ++K GL ++ +GANP++++RGID+    L++++ + A P++  + I  V TI+AGND+ +G MIA A+ KVG  GV+S+E   S +
Sbjct:    3 AKSIQYDTAARHALEQGIDLLTEAVAVTLGPRGRNVVLEQKFGPPQIVNDGITIAKEIELDNPLANTGVALLRQVAAKTNDAAGDGTTTAVVLSHAMVKEGLRNIAAGANPMAIRRGIDQATQFLLDQIAEHALPVKDSNAISQVGTIAAGNDETVGQMIAAAMAKVGQQGVISLEEGQSMQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_MYXXD (60 kDa chaperonin 2 OS=Myxococcus xanthus (strain DK 1622) GN=groL2 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.118e-48
Identity = 97/182 (53.30%), Postives = 136/182 (74.73%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI FD R+R A+  G++ L+DAV +TLGP+GRNVV+++ FGSP +  DGVT+A+ IEL +  EN GA +++EVASKT+D AGDGTTTA+VLA+ I + G   V +G NP+ +KRGIDK V  +V EL+K A+P + + +I  V TISA  D+ IGT+IADA++KVG +GV+++E +   E
Sbjct:    2 AKDILFDVRAREAILRGVNILADAVKVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEIELENKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIFREGAKLVAAGHNPMDIKRGIDKAVGAIVAELKKLAKPTKDKKEIAQVGTISANGDETIGTIIADAMEKVGKEGVITVEEAKGLE 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_STRAL (60 kDa chaperonin 1 OS=Streptomyces albus G GN=groL1 PE=1 SV=3)

HSP 1 Score: 193.356 bits (490), Expect = 1.118e-48
Identity = 96/181 (53.04%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK + FD+ +R A++ G+++L+D V +T+GP+GRNVV+D+ FG+P + NDGVTIAR +E  DP EN GA L++EVA+KTND AGDGTTTA+VLA+ +++ GL +V +GA+P +LK+GID  V  +  EL   ARPI+ + DI AVA +SA  D  +G +IA+A+DKVG DGV+++E S++F
Sbjct:    2 AKILKFDEDARRALERGVNQLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVECDDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGIDAAVAAVSAELLDTARPIDDKSDIAAVAALSA-QDKQVGELIAEAMDKVGKDGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LACF3 (60 kDa chaperonin OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=groL PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.460e-48
Identity = 97/178 (54.49%), Postives = 136/178 (76.40%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AK++ F + +R+AM  G+DKL+D V  T+GP+GRNVVL++ +GSP + NDGVTIA++IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I+  G+ +VT+GANPV ++RGI+K     VE L+K +  ++ +DDI  +A+ISA N + +G +IADA++KVG DGV++IE S
Sbjct:    2 AKELKFSEDARSAMLRGVDKLADTVKTTIGPKGRNVVLEQSYGSPTITNDGVTIAKSIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVTEGMKNVTAGANPVGIRRGIEKATAAAVEGLKKMSHDVKTKDDIAQIASISAANKE-VGKLIADAMEKVGNDGVITIEDS 178          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BORAP (60 kDa chaperonin OS=Borrelia afzelii (strain PKo) GN=groL PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.460e-48
Identity = 97/182 (53.30%), Postives = 138/182 (75.82%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F++ +R ++ +G++KLS+AV +TLGP+GRNV++D+ FGSP V  DGV++AR IEL +P EN GA L++EVA KTND AGDGTTTA+VLA  I + GL +V+SG NP+ +K+GID  V    E++ + A+ I  +++I  VA+ISA ND  IG  IA+A+DKVG DGV+++E S +F+
Sbjct:    2 AKDIYFNEDARKSLLSGVEKLSNAVKVTLGPKGRNVLIDKKFGSPTVTKDGVSVAREIELENPFENMGAQLLKEVAIKTNDVAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVSLAAEKIRQSAKKITTKEEIAQVASISANNDSYIGEKIAEAMDKVGKDGVITVEESKTFD 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_PROMT (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL2A) GN=groL2 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.460e-48
Identity = 95/180 (52.78%), Postives = 142/180 (78.89%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK ++F   SR A++ G++ L++A+ +T+GP+GRNVV+++ FG+P +VNDGVTIA+ I+L DP EN GA LI +VASKT + AGDGTTTA+VLA+ +++ GL +  +GA+P+ L+RG++K V  +V++L+K+++ + G D IK VAT+SAG D+ IG+MIADAIDKV  DGV+++E S S
Sbjct:    2 AKLLSFSDESRGALEKGVNNLANALKVTIGPKGRNVVIEKKFGAPDIVNDGVTIAKEIDLEDPFENIGAKLIEQVASKTKEKAGDGTTTATVLAQFMVQEGLRNTAAGASPIELRRGMEKAVAQIVDDLKKKSKSVSG-DAIKQVATVSAGGDEEIGSMIADAIDKVSFDGVITVEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_PROM1 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL1A) GN=groL1 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.460e-48
Identity = 95/180 (52.78%), Postives = 142/180 (78.89%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK ++F   SR A++ G++ L++A+ +T+GP+GRNVV+++ FG+P +VNDGVTIA+ I+L DP EN GA LI +VASKT + AGDGTTTA+VLA+ +++ GL +  +GA+P+ L+RG++K V  +V++L+K+++ + G D IK VAT+SAG D+ IG+MIADAIDKV  DGV+++E S S
Sbjct:    2 AKLLSFSDESRGALEKGVNNLANALKVTIGPKGRNVVIEKKFGAPDIVNDGVTIAKEIDLEDPFENIGAKLIEQVASKTKEKAGDGTTTATVLAQFMVQEGLRNTAAGASPIELRRGMEKAVAQIVDDLKKKSKSVSG-DAIKQVATVSAGGDEEIGSMIADAIDKVSFDGVITVEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_MANSM (60 kDa chaperonin OS=Mannheimia succiniciproducens (strain MBEL55E) GN=groL PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.907e-48
Identity = 95/183 (51.91%), Postives = 135/183 (73.77%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M AG++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V  +V EL+  ++P E   +I+ V TISA +D ++G +IA A++KVG +GV+++E  +  E
Sbjct:    2 AAKDVKFGNDARVKMLAGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVAAVVTELKALSKPCETSKEIEQVGTISANSDSIVGQLIAQAMEKVGKEGVITVEDGTGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HAES2 (60 kDa chaperonin OS=Haemophilus somnus (strain 2336) GN=groL PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.907e-48
Identity = 95/180 (52.78%), Postives = 135/180 (75.00%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
            +AKD+ F   +R  M AG++ L+DAV +TLGP+GRNV+LD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V+ +VEEL+  ++P E   +I+ V TISA  D+ +G +IA A++KVG +GV+++E  S
Sbjct:    2 TAKDVKFGNDARVKMLAGVNVLADAVKVTLGPKGRNVILDKAFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVSEGLKAVAAGMNPMDLKRGIDKAVNAVVEELKILSKPCETSKEIEQVGTISANADETVGKLIAQAMEKVGKEGVITVEDGS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HAES1 (60 kDa chaperonin OS=Haemophilus somnus (strain 129Pt) GN=groL PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.907e-48
Identity = 95/180 (52.78%), Postives = 135/180 (75.00%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
            +AKD+ F   +R  M AG++ L+DAV +TLGP+GRNV+LD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V+ +VEEL+  ++P E   +I+ V TISA  D+ +G +IA A++KVG +GV+++E  S
Sbjct:    2 TAKDVKFGNDARVKMLAGVNVLADAVKVTLGPKGRNVILDKAFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVSEGLKAVAAGMNPMDLKRGIDKAVNAVVEELKILSKPCETSKEIEQVGTISANADETVGKLIAQAMEKVGKEGVITVEDGS 181          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH603_ACAM11.118e-4851.1060 kDa chaperonin 3 OS=Acaryochloris marina (strai... [more]
CH602_MYXXD1.118e-4853.3060 kDa chaperonin 2 OS=Myxococcus xanthus (strain ... [more]
CH601_STRAL1.118e-4853.0460 kDa chaperonin 1 OS=Streptomyces albus G GN=gro... [more]
CH60_LACF31.460e-4854.4960 kDa chaperonin OS=Lactobacillus fermentum (stra... [more]
CH60_BORAP1.460e-4853.3060 kDa chaperonin OS=Borrelia afzelii (strain PKo)... [more]
CH602_PROMT1.460e-4852.7860 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH601_PROM11.460e-4852.7860 kDa chaperonin 1 OS=Prochlorococcus marinus (st... [more]
CH60_MANSM1.907e-4851.9160 kDa chaperonin OS=Mannheimia succiniciproducens... [more]
CH60_HAES21.907e-4852.7860 kDa chaperonin OS=Haemophilus somnus (strain 23... [more]
CH60_HAES11.907e-4852.7860 kDa chaperonin OS=Haemophilus somnus (strain 12... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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