CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_MYCPA (60 kDa chaperonin 2 OS=Mycobacterium paratuberculosis GN=groL2 PE=3 SV=4)

HSP 1 Score: 192.2 bits (487), Expect = 2.491e-48
Identity = 97/181 (53.59%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IA+D+ +R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP+ LKRGI+K V  + E L K A+ +E +D I A A ISAG D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKSAKEVETKDQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_MYCA1 (60 kDa chaperonin 2 OS=Mycobacterium avium (strain 104) GN=groL2 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.491e-48
Identity = 97/181 (53.59%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IA+D+ +R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP+ LKRGI+K V  + E L K A+ +E +D I A A ISAG D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKSAKEVETKDQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_UNCTG (60 kDa chaperonin OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=groL PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 96/182 (52.75%), Postives = 139/182 (76.37%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK + +   +R AM++G+DKL++AV +TLGP+GR VVLD+ FG+P + NDGVTIA+ IEL DP EN GA L++EVASKTND AGDGTTTA+VLA+ +I  GL ++T+GAN   +K+GI+K V   ++E++K A+ ++ + +I  +A+ISA +D  IG +IADA++KVG DGV+++E   S E
Sbjct:    2 AKQLIYSDEARKAMKSGVDKLANAVKITLGPKGRYVVLDKKFGAPTITNDGVTIAKEIELEDPFENMGAQLVKEVASKTNDIAGDGTTTATVLAQSLINEGLKNITAGANANHIKKGIEKAVAAAIDEIKKIAKQVKNKGEIAQIASISA-SDKEIGNLIADAMEKVGKDGVITVEEGKSSE 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_TSUPA (60 kDa chaperonin OS=Tsukamurella paurometabola GN=groL PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 96/181 (53.04%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL ++ +GANP+ LKRGI+K V  + E L K A+ +E ++ I A A ISAG D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKTIAFDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNMAAGANPLGLKRGIEKAVEAVTEHLLKEAKEVETKEQIAATAGISAG-DPAIGELIAEAMDKVGKEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 97/182 (53.30%), Postives = 140/182 (76.92%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK + F + +R A++ G+D ++DAV +TLGP+GRNVV+++ +GSP + NDGV+IA+ IEL D  EN GA L++EVASKTND AGDGTTTA+VLA+ +IK G+ +VT+GANP+ +KRGIDK V   VE+++  ++ +   DDI  VA+ISA N + IG +IA+A++KVG DGV+++E S S +
Sbjct:    2 AKMLRFSEEARRALERGVDAVADAVKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGIKNVTAGANPILVKRGIDKAVAAAVEKIKDISKKLSNSDDIAHVASISA-NSEEIGKLIAEAMEKVGEDGVITVEDSKSID 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PORPU (60 kDa chaperonin, chloroplastic OS=Porphyra purpurea GN=groL PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 95/180 (52.78%), Postives = 138/180 (76.67%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            +K I +   +R A++ G+D L++AV +TLGP+GRNVVL++ FG+P++VNDGVTIA+ I L D +EN G ALIR+ ASKTND AGDGTTTA+VLA  I+K G+ +V +G+NP+++K+GI+K  + +V ++ + A+P+E    I  VA+IS+GND  +G MIADAID+VG +GV+S+E   S
Sbjct:    2 SKQILYQDDARKALEKGMDILTEAVSVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEISLEDHIENTGVALIRQAASKTNDVAGDGTTTATVLASAIVKQGMRNVAAGSNPMAIKKGIEKATNFVVSKIAEYAKPVEDTTAIVQVASISSGNDAEVGKMIADAIDRVGREGVISLEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_OENOB (60 kDa chaperonin OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=groL PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 98/182 (53.85%), Postives = 133/182 (73.08%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK++ F + +R  MQAGIDKL+DAV  T+GP+GRNVVL++ +G+P + NDGVTIA+A+EL D  EN GA L+ E ASKTND AGDGTTTA+VL + I+  GL +VT+GANPV ++ GI+K     V  L K +  +E    I+ +A+ISA N++ IG +IADA++KVG DGV++IE S   E
Sbjct:    2 AKEVRFSEDARTRMQAGIDKLADAVKTTIGPKGRNVVLEQSYGTPTITNDGVTIAKAVELDDHYENMGAKLVTEAASKTNDVAGDGTTTATVLTQAIVNEGLKNVTAGANPVGIRSGIEKATAAAVAGLNKNSHEVEDSSSIQQIASISAANEE-IGKLIADAMEKVGHDGVITIEESKGIE 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HYDS0 (60 kDa chaperonin OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=groL PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 95/183 (51.91%), Postives = 139/183 (75.96%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK + + + +RA ++AG+DKL++AV +TLGP+GR V++++ +G P V  DGVT+A+ IEL D  EN GA L++EVASKT D AGDGTTTA+VLA+ I   GL ++ SGANP+ LKRGID+ V  ++EE++K + P+    +I+ VATISA ND +IG ++A+A++KVG DGV+++E S S E
Sbjct:    2 AAKHVIYGEEARAKLKAGVDKLANAVKVTLGPKGREVIIEKKWGVPVVTKDGVTVAKEIELKDQFENIGAQLVKEVASKTADVAGDGTTTATVLAQAIFTEGLKAIASGANPMDLKRGIDEAVALVIEEVKKASIPVTSNKEIEQVATISANNDPVIGKLLAEAMEKVGKDGVITVEESKSSE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HELHP (60 kDa chaperonin OS=Helicobacter hepaticus GN=groL PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 93/179 (51.96%), Postives = 138/179 (77.09%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            ++K+I F   +R  +  GI +LSDAV +T+GP+GRNV++ + +G+P +  DGV++A+ IELADP+ N GA L++EVASKT D+AGDGTTTA+VLA  I K GL ++T+GANP+ +KRG+DK    ++EEL+K ++ I G+ DI  VATISA +D+ IG +IA+A++KVG DGV+++E +
Sbjct:    2 ASKEINFSDSARNKLYEGIKQLSDAVKVTMGPKGRNVLIQKSYGAPTITKDGVSVAKEIELADPIANMGAQLVKEVASKTADAAGDGTTTATVLAYSIYKEGLRNITAGANPIEVKRGMDKASAAIIEELKKSSKKIGGKSDIAQVATISANSDENIGALIAEAMEKVGKDGVITVEEA 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLTA (60 kDa chaperonin OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=groL PE=2 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 95/182 (52.20%), Postives = 139/182 (76.37%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I +++ +R  +Q G+  L++AV +TLGP+GR+VV+D+ FGSP+V  DGVT+A+ +ELAD  EN GA +++EVASKT D AGDGTTTA+VLA  I   GL +VT+GANP+ LKRGIDK V  +V++++K ++P++   +I  VATISA ND  IG +IA+A++KVG +G +++E +  FE
Sbjct:    3 AKNIKYNEEARKKIQKGVKTLAEAVKVTLGPKGRHVVIDKSFGSPQVTKDGVTVAKEVELADKHENMGAQMVKEVASKTADKAGDGTTTATVLAEAIYTEGLRNVTAGANPMDLKRGIDKAVKVVVDQIKKISKPVQHHKEIAQVATISANNDAEIGNLIAEAMEKVGKNGSITVEEAKGFE 184          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_MYCPA2.491e-4853.5960 kDa chaperonin 2 OS=Mycobacterium paratuberculo... [more]
CH602_MYCA12.491e-4853.5960 kDa chaperonin 2 OS=Mycobacterium avium (strain... [more]
CH60_UNCTG3.253e-4852.7560 kDa chaperonin OS=Uncultured termite group 1 ba... [more]
CH60_TSUPA3.253e-4853.0460 kDa chaperonin OS=Tsukamurella paurometabola GN... [more]
CH60_THEM43.253e-4853.3060 kDa chaperonin OS=Thermosipho melanesiensis (st... [more]
CH60_PORPU3.253e-4852.7860 kDa chaperonin, chloroplastic OS=Porphyra purpu... [more]
CH60_OENOB3.253e-4853.8560 kDa chaperonin OS=Oenococcus oeni (strain BAA-3... [more]
CH60_HYDS03.253e-4851.9160 kDa chaperonin OS=Hydrogenobaculum sp. (strain ... [more]
CH60_HELHP3.253e-4851.9660 kDa chaperonin OS=Helicobacter hepaticus GN=gro... [more]
CH60_CHLTA3.253e-4852.2060 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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