CX671660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_MYCPA (60 kDa chaperonin 2 OS=Mycobacterium paratuberculosis GN=groL2 PE=3 SV=4) HSP 1 Score: 192.2 bits (487), Expect = 2.491e-48 Identity = 97/181 (53.59%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735 AK IA+D+ +R ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP+ LKRGI+K V + E L K A+ +E +D I A A ISAG D IG +IA+A+DKVG +GV+++E S++F Sbjct: 2 AKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKSAKEVETKDQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTF 181
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_MYCA1 (60 kDa chaperonin 2 OS=Mycobacterium avium (strain 104) GN=groL2 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.491e-48 Identity = 97/181 (53.59%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735 AK IA+D+ +R ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP+ LKRGI+K V + E L K A+ +E +D I A A ISAG D IG +IA+A+DKVG +GV+++E S++F Sbjct: 2 AKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKSAKEVETKDQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTF 181
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_UNCTG (60 kDa chaperonin OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=groL PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48 Identity = 96/182 (52.75%), Postives = 139/182 (76.37%), Query Frame = 1 Query: 196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 AK + + +R AM++G+DKL++AV +TLGP+GR VVLD+ FG+P + NDGVTIA+ IEL DP EN GA L++EVASKTND AGDGTTTA+VLA+ +I GL ++T+GAN +K+GI+K V ++E++K A+ ++ + +I +A+ISA +D IG +IADA++KVG DGV+++E S E Sbjct: 2 AKQLIYSDEARKAMKSGVDKLANAVKITLGPKGRYVVLDKKFGAPTITNDGVTIAKEIELEDPFENMGAQLVKEVASKTNDIAGDGTTTATVLAQSLINEGLKNITAGANANHIKKGIEKAVAAAIDEIKKIAKQVKNKGEIAQIASISA-SDKEIGNLIADAMEKVGKDGVITVEEGKSSE 182
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_TSUPA (60 kDa chaperonin OS=Tsukamurella paurometabola GN=groL PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48 Identity = 96/181 (53.04%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735 AK IAFD+ +R ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL ++ +GANP+ LKRGI+K V + E L K A+ +E ++ I A A ISAG D IG +IA+A+DKVG +GV+++E S++F Sbjct: 2 AKTIAFDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNMAAGANPLGLKRGIEKAVEAVTEHLLKEAKEVETKEQIAATAGISAG-DPAIGELIAEAMDKVGKEGVITVEESNTF 181
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48 Identity = 97/182 (53.30%), Postives = 140/182 (76.92%), Query Frame = 1 Query: 196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 AK + F + +R A++ G+D ++DAV +TLGP+GRNVV+++ +GSP + NDGV+IA+ IEL D EN GA L++EVASKTND AGDGTTTA+VLA+ +IK G+ +VT+GANP+ +KRGIDK V VE+++ ++ + DDI VA+ISA N + IG +IA+A++KVG DGV+++E S S + Sbjct: 2 AKMLRFSEEARRALERGVDAVADAVKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGIKNVTAGANPILVKRGIDKAVAAAVEKIKDISKKLSNSDDIAHVASISA-NSEEIGKLIAEAMEKVGEDGVITVEDSKSID 182
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PORPU (60 kDa chaperonin, chloroplastic OS=Porphyra purpurea GN=groL PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48 Identity = 95/180 (52.78%), Postives = 138/180 (76.67%), Query Frame = 1 Query: 196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732 +K I + +R A++ G+D L++AV +TLGP+GRNVVL++ FG+P++VNDGVTIA+ I L D +EN G ALIR+ ASKTND AGDGTTTA+VLA I+K G+ +V +G+NP+++K+GI+K + +V ++ + A+P+E I VA+IS+GND +G MIADAID+VG +GV+S+E S Sbjct: 2 SKQILYQDDARKALEKGMDILTEAVSVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEISLEDHIENTGVALIRQAASKTNDVAGDGTTTATVLASAIVKQGMRNVAAGSNPMAIKKGIEKATNFVVSKIAEYAKPVEDTTAIVQVASISSGNDAEVGKMIADAIDRVGREGVISLEEGKS 181
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_OENOB (60 kDa chaperonin OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=groL PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48 Identity = 98/182 (53.85%), Postives = 133/182 (73.08%), Query Frame = 1 Query: 196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 AK++ F + +R MQAGIDKL+DAV T+GP+GRNVVL++ +G+P + NDGVTIA+A+EL D EN GA L+ E ASKTND AGDGTTTA+VL + I+ GL +VT+GANPV ++ GI+K V L K + +E I+ +A+ISA N++ IG +IADA++KVG DGV++IE S E Sbjct: 2 AKEVRFSEDARTRMQAGIDKLADAVKTTIGPKGRNVVLEQSYGTPTITNDGVTIAKAVELDDHYENMGAKLVTEAASKTNDVAGDGTTTATVLTQAIVNEGLKNVTAGANPVGIRSGIEKATAAAVAGLNKNSHEVEDSSSIQQIASISAANEE-IGKLIADAMEKVGHDGVITIEESKGIE 182
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HYDS0 (60 kDa chaperonin OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=groL PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48 Identity = 95/183 (51.91%), Postives = 139/183 (75.96%), Query Frame = 1 Query: 193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 +AK + + + +RA ++AG+DKL++AV +TLGP+GR V++++ +G P V DGVT+A+ IEL D EN GA L++EVASKT D AGDGTTTA+VLA+ I GL ++ SGANP+ LKRGID+ V ++EE++K + P+ +I+ VATISA ND +IG ++A+A++KVG DGV+++E S S E Sbjct: 2 AAKHVIYGEEARAKLKAGVDKLANAVKVTLGPKGREVIIEKKWGVPVVTKDGVTVAKEIELKDQFENIGAQLVKEVASKTADVAGDGTTTATVLAQAIFTEGLKAIASGANPMDLKRGIDEAVALVIEEVKKASIPVTSNKEIEQVATISANNDPVIGKLLAEAMEKVGKDGVITVEESKSSE 184
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HELHP (60 kDa chaperonin OS=Helicobacter hepaticus GN=groL PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48 Identity = 93/179 (51.96%), Postives = 138/179 (77.09%), Query Frame = 1 Query: 193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726 ++K+I F +R + GI +LSDAV +T+GP+GRNV++ + +G+P + DGV++A+ IELADP+ N GA L++EVASKT D+AGDGTTTA+VLA I K GL ++T+GANP+ +KRG+DK ++EEL+K ++ I G+ DI VATISA +D+ IG +IA+A++KVG DGV+++E + Sbjct: 2 ASKEINFSDSARNKLYEGIKQLSDAVKVTMGPKGRNVLIQKSYGAPTITKDGVSVAKEIELADPIANMGAQLVKEVASKTADAAGDGTTTATVLAYSIYKEGLRNITAGANPIEVKRGMDKASAAIIEELKKSSKKIGGKSDIAQVATISANSDENIGALIAEAMEKVGKDGVITVEEA 180
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLTA (60 kDa chaperonin OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=groL PE=2 SV=3) HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48 Identity = 95/182 (52.20%), Postives = 139/182 (76.37%), Query Frame = 1 Query: 196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 AK+I +++ +R +Q G+ L++AV +TLGP+GR+VV+D+ FGSP+V DGVT+A+ +ELAD EN GA +++EVASKT D AGDGTTTA+VLA I GL +VT+GANP+ LKRGIDK V +V++++K ++P++ +I VATISA ND IG +IA+A++KVG +G +++E + FE Sbjct: 3 AKNIKYNEEARKKIQKGVKTLAEAVKVTLGPKGRHVVIDKSFGSPQVTKDGVTVAKEVELADKHENMGAQMVKEVASKTADKAGDGTTTATVLAEAIYTEGLRNVTAGANPMDLKRGIDKAVKVVVDQIKKISKPVQHHKEIAQVATISANNDAEIGNLIAEAMEKVGKNGSITVEEAKGFE 184 The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bpback to top |