CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLPN (60 kDa chaperonin OS=Chlamydia pneumoniae GN=groL PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 96/183 (52.46%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK+I +++ +R  +  G+  L++AV +TLGP+GR+VV+D+ FGSP+V  DGVT+A+ IEL D  EN GA +++EVASKT D AGDGTTTA+VLA  I   GL +VT+GANP+ LKRGIDK V  +V+EL+K ++P++   +I  VATISA ND  IG +IA+A++KVG +G +++E +  FE
Sbjct:    2 AAKNIKYNEEARKKIHKGVKTLAEAVKVTLGPKGRHVVIDKSFGSPQVTKDGVTVAKEIELEDKHENMGAQMVKEVASKTADKAGDGTTTATVLAEAIYSEGLRNVTAGANPMDLKRGIDKAVKVVVDELKKISKPVQHHKEIAQVATISANNDSEIGNLIAEAMEKVGKNGSITVEEAKGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLMU (60 kDa chaperonin OS=Chlamydia muridarum GN=groL PE=2 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 95/182 (52.20%), Postives = 139/182 (76.37%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I +++ +R  +Q G+  L++AV +TLGP+GR+VV+D+ FGSP+V  DGVT+A+ +ELAD  EN GA +++EVASKT D AGDGTTTA+VLA  I   GL +VT+GANP+ LKRGIDK V  +V++++K ++P++   +I  VATISA ND  IG +IA+A++KVG +G +++E +  FE
Sbjct:    3 AKNIKYNEEARKKIQKGVKTLAEAVKVTLGPKGRHVVIDKSFGSPQVTKDGVTVAKEVELADKHENMGAQMVKEVASKTADKAGDGTTTATVLAEAIYTEGLRNVTAGANPMDLKRGIDKAVKVVVDQIKKISKPVQHHKEIAQVATISANNDAEIGNLIAEAMEKVGKNGSITVEEAKGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BIFAS (60 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) GN=groL PE=3 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 95/181 (52.49%), Postives = 138/181 (76.24%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK I +D+ +R  M AG+DKL+D V +TLGP+GRNVVLD+ +G+P + NDGV+IA+ I+L DP E  GA L++EVA +T+D AGDGTTTA+VLA+ ++  GL +V +G+NP++L+RGI+K    LV++L   A+P+E ++ I A ATISAG D  +G  IA+A+DKVG DGV+++E ++ F
Sbjct:    2 AKIIEYDEEARQGMLAGLDKLADTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEIDLEDPFERIGAELVKEVAKRTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASDALVKQLVASAKPVETKEQIAATATISAG-DPEVGEKIAEALDKVGQDGVVTVEDNNRF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BIFA0 (60 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=groL PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 95/181 (52.49%), Postives = 138/181 (76.24%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK I +D+ +R  M AG+DKL+D V +TLGP+GRNVVLD+ +G+P + NDGV+IA+ I+L DP E  GA L++EVA +T+D AGDGTTTA+VLA+ ++  GL +V +G+NP++L+RGI+K    LV++L   A+P+E ++ I A ATISAG D  +G  IA+A+DKVG DGV+++E ++ F
Sbjct:    2 AKIIEYDEEARQGMLAGLDKLADTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEIDLEDPFERIGAELVKEVAKRTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASDALVKQLVASAKPVETKEQIAATATISAG-DPEVGEKIAEALDKVGQDGVVTVEDNNRF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_MYCUA (60 kDa chaperonin 2 OS=Mycobacterium ulcerans (strain Agy99) GN=groL2 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 97/181 (53.59%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IA+D+ +R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ ++K GL +V +GANP+ LKRGI+K V  + E L K A+ +E ++ I A A ISAG D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPLGLKRGIEKAVEKVTETLLKSAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_VARPS (60 kDa chaperonin OS=Variovorax paradoxus (strain S110) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 96/183 (52.46%), Postives = 136/183 (74.32%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +RA M  G++ L++AV +TLGP+GRNVVL+  FG+P V  DGV++A+ IEL D ++N GA L++EVASKT+D+AGDGTTTA+VLA+ I++ G   V +G NP+ LKRGIDK V  LVEEL+K ++P     +I  V +ISA +D+ IG +IADA+DKVG +GV+++E   S +
Sbjct:    2 AAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGINPMDLKRGIDKAVTALVEELKKASKPTTTSKEIAQVGSISANSDETIGKLIADAMDKVGKEGVITVEDGKSLD 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_THEYD (60 kDa chaperonin OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 99/179 (55.31%), Postives = 133/179 (74.30%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            +AK + F   +R ++  G+  L+DAV  TLGPRGRNVV++ +FGSP V  DGVT+A+ I+L +P EN GA L+REVASKT+D AGDGTTTA+VLA  I K GL  V++GAN + LKRGIDK V  +VEEL+K ++P+  + +I  V TISA ND  IG +IA+A+DKVG DGV+++E +
Sbjct:    2 AAKQLIFGDAARQSILKGVTLLTDAVKATLGPRGRNVVIERKFGSPNVTKDGVTVAKEIDLKEPFENMGAQLVREVASKTSDVAGDGTTTATVLAYAIYKEGLKYVSAGANSMDLKRGIDKAVEAVVEELKKISKPVVDKKEIAQVGTISANNDVSIGELIAEAMDKVGKDGVITVEEA 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_THEPX (60 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 97/180 (53.89%), Postives = 139/180 (77.22%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I + + +R A++ G++ ++D V +TLGPRGRNVVLD+ +GSP V NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ +++ GL ++ +GANP+ L+RGI K V   VE L++ ++PI+ ++ I  VA+ISA  D+ IG +IA+A+DKVG DGV+++E S +
Sbjct:    2 AKQIKYGEEARRALERGVNAVADTVKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIELEDPFENQGAQLLKEVATKTNDVAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIAKAVDAAVEGLKRISKPIDNKESIAHVASISAA-DEEIGNLIAEAMDKVGKDGVITVEESKT 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_THEP3 (60 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 97/180 (53.89%), Postives = 139/180 (77.22%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I + + +R A++ G++ ++D V +TLGPRGRNVVLD+ +GSP V NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ +++ GL ++ +GANP+ L+RGI K V   VE L++ ++PI+ ++ I  VA+ISA  D+ IG +IA+A+DKVG DGV+++E S +
Sbjct:    2 AKQIKYGEEARRALERGVNAVADTVKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIELEDPFENQGAQLLKEVATKTNDVAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIAKAVDAAVEGLKRISKPIDNKESIAHVASISAA-DEEIGNLIAEAMDKVGKDGVITVEESKT 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_THAPS (60 kDa chaperonin, chloroplastic OS=Thalassiosira pseudonana GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 95/176 (53.98%), Postives = 136/176 (77.27%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIE 720
            AK I +   +R A++ G++ + +AV +TLGP+GRNVVL++ +GSP++VNDGVTIA+ I L D +EN G +LIR+ A+KTND AGDGTTTA+VLA  ++K GL +V +GANP+S+K G++K    LV ++ + A+P+E    IK VA+ISAGNDD+IG +IADA+ KVG +GV+S+E
Sbjct:    2 AKKILYQDNARRALERGMEIMVEAVSVTLGPKGRNVVLEKTYGSPQIVNDGVTIAKEISLEDHIENTGVSLIRQAAAKTNDVAGDGTTTATVLAYAMVKEGLKNVAAGANPISIKLGMEKATQYLVMQINEFAQPVEDIQSIKQVASISAGNDDVIGALIADALAKVGKEGVISLE 177          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CHLPN3.253e-4852.4660 kDa chaperonin OS=Chlamydia pneumoniae GN=groL ... [more]
CH60_CHLMU3.253e-4852.2060 kDa chaperonin OS=Chlamydia muridarum GN=groL P... [more]
CH60_BIFAS3.253e-4852.4960 kDa chaperonin OS=Bifidobacterium animalis subs... [more]
CH60_BIFA03.253e-4852.4960 kDa chaperonin OS=Bifidobacterium animalis subs... [more]
CH602_MYCUA3.253e-4853.5960 kDa chaperonin 2 OS=Mycobacterium ulcerans (str... [more]
CH60_VARPS4.248e-4852.4660 kDa chaperonin OS=Variovorax paradoxus (strain ... [more]
CH60_THEYD4.248e-4855.3160 kDa chaperonin OS=Thermodesulfovibrio yellowsto... [more]
CH60_THEPX4.248e-4853.8960 kDa chaperonin OS=Thermoanaerobacter sp. (strai... [more]
CH60_THEP34.248e-4853.8960 kDa chaperonin OS=Thermoanaerobacter pseudethan... [more]
CH60_THAPS4.248e-4853.9860 kDa chaperonin, chloroplastic OS=Thalassiosira ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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