CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_STAS1 (60 kDa chaperonin OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 99/181 (54.70%), Postives = 140/181 (77.35%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AKD+ F + +R +M  G+DKL++AV +T+GP+GRNVVLD E+ SP + NDGVTIA+ IEL DP EN GA L++EVA+KTN+ AGDGTTTA+VLA+ +I+ GL +VTSGANPV L++GIDK V   +E L + ++ ++ +++I  V +ISA  D+ IG  I++A++KVG DGV++IE SS F
Sbjct:    2 AKDLKFSEDARQSMLRGVDKLANAVKVTIGPKGRNVVLDKEYTSPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRQGIDKAVEVAIEALHEISQNVDNKNEIAQVGSISAA-DEEIGKYISEAMEKVGNDGVITIEESSGF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LEUMM (60 kDa chaperonin OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 96/182 (52.75%), Postives = 136/182 (74.73%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK++ F + +RA M+AG+DKL+D V  T+GP+GRNVVL++ +G+P + NDGVTIA+AIEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I+  GL +VT+GANPV ++ GI+K     V +L + +  +  +D+I  +A+ISA N++ +G +IA+A+DKVG DGV++IE S   E
Sbjct:    2 AKELKFSEDARAKMKAGVDKLADTVKTTIGPKGRNVVLEQSYGAPTITNDGVTIAKAIELEDHFENMGAKLVAEVASKTNDIAGDGTTTATVLTQAIVGEGLKNVTAGANPVGIRTGIEKATAAAVAKLHEMSHTVNTKDEIAQIASISAANEE-VGELIAEAMDKVGNDGVITIEESKGIE 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_GRATL (60 kDa chaperonin, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 95/180 (52.78%), Postives = 135/180 (75.00%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +   +R A++ G+D L +AV +TLGP+GRNVVL+ +FG+P+++NDGVTIA+ IEL D  EN G ALIR+ ASKTND AGDGTTTA+VLA  I+K GL +V +GANP++LK+GI K V  +V ++ + ++PI    D+  + +IS+GND  +GTMIA+AI +VG +G++S+E   S
Sbjct:    2 AKKILYQDNARKALEKGMDTLVEAVAITLGPKGRNVVLERKFGAPQIINDGVTIAKEIELQDLAENTGVALIRQAASKTNDVAGDGTTTATVLAHAIVKQGLKNVAAGANPITLKKGIQKAVKFVVGKIAEYSKPICSMQDVTHIGSISSGNDVEVGTMIANAIQQVGKEGIISLEEGQS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLOPH (60 kDa chaperonin OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 98/182 (53.85%), Postives = 134/182 (73.63%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI +   +R AM+AG++KL++ V +TLGP+GRNVVLD+ FG+P + NDGVTIA+ IEL D  EN GA L++EVA+KTND AGDGTTTA+VLA+ +I  G+ ++ +GANP+ L+RG+ K     VE +   +  I G+D I  VA ISAG DD +G M+ADA+DKV  DGV++IE S + +
Sbjct:    2 AKDIKYSADARVAMEAGVNKLANTVRVTLGPKGRNVVLDKSFGAPLITNDGVTIAKEIELEDSFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMINEGMKNLAAGANPIILRRGMKKATDCAVEAISSMSSAINGKDQIAKVAAISAG-DDSVGEMVADAMDKVSKDGVITIEESKTMQ 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLTR (60 kDa chaperonin OS=Chlamydia trachomatis GN=groL PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 95/182 (52.20%), Postives = 138/182 (75.82%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I +++ +R  +Q G+  L++AV +TLGP+GR+VV+D+ FGSP+V  DGVT+A+ +ELAD  EN GA +++EVASKT D AGDGTTTA+VLA  I   GL +VT+GANP+ LKRGIDK V  +V+++ K ++P++   +I  VATISA ND  IG +IA+A++KVG +G +++E +  FE
Sbjct:    3 AKNIKYNEEARKKIQKGVKTLAEAVKVTLGPKGRHVVIDKSFGSPQVTKDGVTVAKEVELADKHENMGAQMVKEVASKTADKAGDGTTTATVLAEAIYTEGLRNVTAGANPMDLKRGIDKAVKVVVDQIRKISKPVQHHKEIAQVATISANNDAEIGNLIAEAMEKVGKNGSITVEEAKGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLTB (60 kDa chaperonin OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 95/182 (52.20%), Postives = 139/182 (76.37%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I +++ +R  +Q G+  L++AV +TLGP+GR+VV+D+ FGSP+V  DGVT+A+ +ELAD  EN GA +++EVASKT D AGDGTTTA+VLA  I   GL +VT+GANP+ LKRGIDK V  +V++++K ++P++   +I  VATISA ND  IG +IA+A++KVG +G +++E +  FE
Sbjct:    3 AKNIKYNEEARKKIQKGVKTLAEAVKVTLGPKGRHVVIDKSFGSPQVTKDGVTVAKEVELADKHENMGAQMVKEVASKTADKAGDGTTTATVLAEAIYTEGLRNVTAGANPMDLKRGIDKAVKVVVDQVKKISKPVQHHKEIAQVATISANNDAEIGNLIAEAMEKVGKNGSITVEEAKGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLT2 (60 kDa chaperonin OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 95/182 (52.20%), Postives = 139/182 (76.37%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I +++ +R  +Q G+  L++AV +TLGP+GR+VV+D+ FGSP+V  DGVT+A+ +ELAD  EN GA +++EVASKT D AGDGTTTA+VLA  I   GL +VT+GANP+ LKRGIDK V  +V++++K ++P++   +I  VATISA ND  IG +IA+A++KVG +G +++E +  FE
Sbjct:    3 AKNIKYNEEARKKIQKGVKTLAEAVKVTLGPKGRHVVIDKSFGSPQVTKDGVTVAKEVELADKHENMGAQMVKEVASKTADKAGDGTTTATVLAEAIYTEGLRNVTAGANPMDLKRGIDKAVKVVVDQVKKISKPVQHHKEIAQVATISANNDAEIGNLIAEAMEKVGKNGSITVEEAKGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_AGGAC (60 kDa chaperonin OS=Aggregatibacter actinomycetemcomitans GN=groL PE=1 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 94/183 (51.37%), Postives = 135/183 (73.77%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V+ +V EL+  ++P E   +I+ V TISA +D ++G +IA A++KVG +GV+++E  +  E
Sbjct:    2 AAKDVKFGNDARVKMLNGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVNSVVAELKNLSKPCETSKEIEQVGTISANSDSIVGQLIAQAMEKVGKEGVITVEDGTGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACIF5 (60 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 95/179 (53.07%), Postives = 139/179 (77.65%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
            AK +AF + +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++A+ IELAD  EN GA +++EVAS+ +D AGDGTTTA+VLA+ II+ GL +V +G NP+ LKRGIDK+V  +VEEL+K+++P + + ++  V TISA +DD IG +IA+A++KVG +GV+++E  S
Sbjct:    3 AKQVAFAEHAREKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASQASDEAGDGTTTATVLAQAIIREGLKAVIAGMNPMDLKRGIDKSVIVVVEELKKQSKPCKTQKEVAQVGTISANSDDSIGKIIAEAMEKVGNEGVITVEEGS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACIF2 (60 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 95/179 (53.07%), Postives = 139/179 (77.65%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSS 729
            AK +AF + +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++A+ IELAD  EN GA +++EVAS+ +D AGDGTTTA+VLA+ II+ GL +V +G NP+ LKRGIDK+V  +VEEL+K+++P + + ++  V TISA +DD IG +IA+A++KVG +GV+++E  S
Sbjct:    3 AKQVAFAEHAREKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASQASDEAGDGTTTATVLAQAIIREGLKAVIAGMNPMDLKRGIDKSVIVVVEELKKQSKPCKTQKEVAQVGTISANSDDSIGKIIAEAMEKVGNEGVITVEEGS 181          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_STAS14.248e-4854.7060 kDa chaperonin OS=Staphylococcus saprophyticus ... [more]
CH60_LEUMM4.248e-4852.7560 kDa chaperonin OS=Leuconostoc mesenteroides sub... [more]
CH60_GRATL4.248e-4852.7860 kDa chaperonin, chloroplastic OS=Gracilaria ten... [more]
CH60_CLOPH4.248e-4853.8560 kDa chaperonin OS=Clostridium phytofermentans (... [more]
CH60_CHLTR4.248e-4852.2060 kDa chaperonin OS=Chlamydia trachomatis GN=groL... [more]
CH60_CHLTB4.248e-4852.2060 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH60_CHLT24.248e-4852.2060 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH60_AGGAC4.248e-4851.3760 kDa chaperonin OS=Aggregatibacter actinomycetem... [more]
CH60_ACIF54.248e-4853.0760 kDa chaperonin OS=Acidithiobacillus ferrooxidan... [more]
CH60_ACIF24.248e-4853.0760 kDa chaperonin OS=Acidithiobacillus ferrooxidan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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