CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACIAD (60 kDa chaperonin OS=Acinetobacter sp. (strain ADP1) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 96/183 (52.46%), Postives = 133/183 (72.68%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            SAKD+ F   +R+ M AG++ L+DAV +TLGP+GRNVV+D  FG+P +  DGVT+A+ I L D  EN GA L+REV+SKTND AGDGTTTA+VLA+ I+  G+ SVT+G NP+ LKRGID  V  +VE +   A+P +    I+ V +ISA +D+ +G +IA A++KVG +GV+++E  S FE
Sbjct:    2 SAKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEITLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVRAVVENIRATAKPADDFKAIEQVGSISANSDETVGKLIAQAMEKVGKEGVITVEEGSGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_MYCLE (60 kDa chaperonin 2 OS=Mycobacterium leprae GN=groL2 PE=3 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 97/181 (53.59%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IA+D+ +R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ ++K GL +V +GANP+ LKRGI+K V  + E L K A+ +E ++ I A A ISAG D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKTIAYDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPLGLKRGIEKAVDKVTETLLKDAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_SACEN (60 kDa chaperonin 1 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=groL1 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 97/181 (53.59%), Postives = 140/181 (77.35%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GA+P++LKRGI+K    + E+L K A+ IE +D I A A ISAG D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKMIAFDEDARRGLERGMNTLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGASPIALKRGIEKATEAIAEQLLKSAKEIETKDQIAATAAISAG-DRQIGELIAEAMDKVGKEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_KINRD (60 kDa chaperonin 1 OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=groL1 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 98/180 (54.44%), Postives = 134/180 (74.44%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK + FD  +R A++ G+D L++AV +TLGP+GRNVV+D+ +G+P + NDGVTIAR +EL DP EN GA L +EVA+KTND AGDGTTTA+VLA+ ++  GL +V +GA P  LKRGID  V  + ++L   AR ++G+ DI  VATISA  D  +G ++ADA DKVG DGV+++E SS+
Sbjct:    2 AKQLLFDDTARKALERGVDALANAVKVTLGPKGRNVVIDKKWGAPTITNDGVTIAREVELDDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVHEGLRNVAAGAAPSGLKRGIDAAVDAVSDQLLSMARDVDGKGDIAHVATISA-QDPAVGELLADAFDKVGKDGVITVEESST 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_ANADF (60 kDa chaperonin 1 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=groL1 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.248e-48
Identity = 94/182 (51.65%), Postives = 136/182 (74.73%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+IAF Q +R A+  G+  L++AV +TLGP+GRNVV+++ FGSP +  DGVT+A+ IE+ +  EN GA ++REVAS+T+D AGDGTTTA+VLAR + + GL  V +G NP+ LKRGID+ V  +V EL+K ++P +G+ DI  V TISA  D+ IG +IA+A++KVG +GV+++E +   E
Sbjct:    3 AKEIAFHQGAREAILRGVQTLAEAVAVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEIEVENKFENMGAQMVREVASQTSDKAGDGTTTATVLARALFEEGLKLVAAGHNPMDLKRGIDRAVEVIVAELKKLSKPTQGKKDIAQVGTISANGDETIGNIIAEAMEKVGKEGVITVEEAKGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_THIDA (60 kDa chaperonin OS=Thiobacillus denitrificans (strain ATCC 25259) GN=groL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.548e-48
Identity = 97/183 (53.01%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M AG++ L+DAV +TLGP+GRNVVLD  FG+P V  DGV++A+ IEL D +EN GA +++EVASKT+D AGDGTTTA+VLA+ I+  G+  V +G NP+ LKRGIDK V+ + EEL+K ++P     +I  V +ISA +D  IG +IADA+DKVG +GV+++E  S  E
Sbjct:    2 AAKDVRFGDSARHRMVAGVNVLADAVKVTLGPKGRNVVLDRSFGAPTVTKDGVSVAKEIELKDKLENMGAQMVKEVASKTSDVAGDGTTTATVLAQSIVNEGMKFVAAGMNPMDLKRGIDKAVNAITEELKKISKPCTTSKEIAQVGSISANSDAPIGQIIADAMDKVGKEGVITVEDGSGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PHATR (60 kDa chaperonin, chloroplastic OS=Phaeodactylum tricornutum GN=groL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.548e-48
Identity = 94/176 (53.41%), Postives = 138/176 (78.41%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIE 720
            AK I +   +R A++ G++ + +AV +TLGP+GRNVVL++ +GSP++VNDGVTIA+ I+L D +EN G +LIR+ ASKTND AGDGTTTA+VLA  ++K GL +V +GANP+S+K G++K    LV ++ + A+P+E    I+ VA+ISAGND++IG++IADA+ KVG +GV+S+E
Sbjct:    2 AKKILYQDNARRALERGMEIMVEAVSVTLGPKGRNVVLEKSYGSPQIVNDGVTIAKEIKLLDHIENTGVSLIRQAASKTNDVAGDGTTTATVLAYAMVKEGLKNVAAGANPISIKLGMEKASQYLVTQINEFAQPVEDIQSIQQVASISAGNDEIIGSLIADALSKVGKEGVISLE 177          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_FLAJ1 (60 kDa chaperonin OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=groL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.548e-48
Identity = 96/179 (53.63%), Postives = 136/179 (75.98%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPI-EGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AKDI FD  +R  ++ G+D L++AV +TLGP+GRNV++ + FG P V  DGV++A+ IEL DP+EN GA +++EVASKTND AGDGTTTA+VLA+ I+K GL +V +GANP+ LKRGIDK V  +V +L K+A+ +    D I+ +A+ISA ND++IG +IA A  KVG +GV+++E +
Sbjct:    2 AKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPTVTKDGVSVAKEIELKDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGIDKAVETIVADLAKQAKVVGSDSDKIQQIASISANNDEVIGELIATAFAKVGKEGVITVEEA 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLOAB (60 kDa chaperonin OS=Clostridium acetobutylicum GN=groL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.548e-48
Identity = 99/180 (55.00%), Postives = 138/180 (76.67%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I + + +R +MQ G+DKL+D V +TLGP+GRNVVLD+ FG+P + NDGV+IA+ IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI   V   VE L+K ++ + G++DI  VA+ISA  D  IG +IADA++KVG +GV+++E S S
Sbjct:    2 AKQILYGEEARRSMQKGVDKLADTVKVTLGPKGRNVVLDKKFGAPLITNDGVSIAKEIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRNGIRLAVDKTVEGLKKVSKNVNGKEDIARVASISAA-DPEIGKLIADAMEKVGNEGVITVEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_AZOPC (60 kDa chaperonin OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=groL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.548e-48
Identity = 97/183 (53.01%), Postives = 141/183 (77.05%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPI-EGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F+  +R  ++ G+D+L+DAV +TLGP+GRNV++D+ FG+P++  DGVT+A+ IEL+D  +N GA L++EVASKTND+AGDGTTTA+VLA+ II +G+ +V +GANP+ LKRGIDK V  +VE L+K++R + +    I+ VA ISA  D+ IG++IA+A+ KV  +GV++IE S   E
Sbjct:    2 AKDIKFNLDARDLLKKGVDELADAVKVTLGPKGRNVIIDKKFGAPQITKDGVTVAKEIELSDHFQNMGAQLVKEVASKTNDNAGDGTTTATVLAQSIINVGMKNVAAGANPMDLKRGIDKAVAKVVESLKKQSRAVGDDFGKIENVAKISANGDETIGSLIAEAMKKVKKEGVITIEESKGIE 184          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_ACIAD4.248e-4852.4660 kDa chaperonin OS=Acinetobacter sp. (strain ADP... [more]
CH602_MYCLE4.248e-4853.5960 kDa chaperonin 2 OS=Mycobacterium leprae GN=gro... [more]
CH601_SACEN4.248e-4853.5960 kDa chaperonin 1 OS=Saccharopolyspora erythraea... [more]
CH601_KINRD4.248e-4854.4460 kDa chaperonin 1 OS=Kineococcus radiotolerans (... [more]
CH601_ANADF4.248e-4851.6560 kDa chaperonin 1 OS=Anaeromyxobacter sp. (strai... [more]
CH60_THIDA5.548e-4853.0160 kDa chaperonin OS=Thiobacillus denitrificans (s... [more]
CH60_PHATR5.548e-4853.4160 kDa chaperonin, chloroplastic OS=Phaeodactylum ... [more]
CH60_FLAJ15.548e-4853.6360 kDa chaperonin OS=Flavobacterium johnsoniae (st... [more]
CH60_CLOAB5.548e-4855.0060 kDa chaperonin OS=Clostridium acetobutylicum GN... [more]
CH60_AZOPC5.548e-4853.0160 kDa chaperonin OS=Azobacteroides pseudotrichony... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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