CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_RHISN (60 kDa chaperonin 2 OS=Rhizobium sp. (strain NGR234) GN=groL2 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.548e-48
Identity = 95/181 (52.49%), Postives = 133/181 (73.48%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            +AK++ F   +R  M  G+D L++AV +TLGP+GRNVVLD+ FG+P++  DGVT+A+ IEL D  EN GA ++REVASKT+D AGDGTTTA+VLA+ I+K G  +V SG NP+ LKRG+DK V  +VEEL + AR +   D+I  V TISA  D  IG  +A+A++KVG +GV+++E + +
Sbjct:    2 AAKEVRFHTEAREKMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGVDKAVDAVVEELRRNARKVTKNDEIAQVGTISANGDTEIGRFLAEAMEKVGNEGVITVEEAKT 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_FRAAA (60 kDa chaperonin 2 OS=Frankia alni (strain ACN14a) GN=groL2 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.548e-48
Identity = 95/181 (52.49%), Postives = 141/181 (77.90%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G+++L+DAV +TLGP+GRNVVL++ +G P + NDGV+IA+ IEL DP E  GA L++EVA KTND AGDGTTTA++LA+ +++ GL +V +GANP+ LK+GI+  V  + EEL K+A+ +E ++ I + A+ISAG D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKMIAFDEEARRGLERGMNQLADAVRVTLGPKGRNVVLEKKWGVPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTNDVAGDGTTTATILAQALVREGLRNVAAGANPLGLKKGIEVAVERVSEELSKQAKEVETKEQIASTASISAG-DSAIGGLIAEALDKVGKEGVVTVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_WIGBR (60 kDa chaperonin OS=Wigglesworthia glossinidia brevipalpis GN=groL PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.246e-48
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R+ M  G++ L+DAV +TLGP+GRNVVLD+ FGSP +  DGV++AR +EL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V G V EL+K + P      I  V TISA  D  +GT+IA+A++KVG +GV+++E  S  +
Sbjct:    2 AAKDVKFGNDARSKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGSPMITKDGVSVAREVELEDKFENMGAQMLKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVIGAVAELKKLSVPCSDSKSIAQVGTISANADKTVGTLIAEAMEKVGKEGVITVEEGSGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_MACCJ (60 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groL PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.246e-48
Identity = 100/181 (55.25%), Postives = 138/181 (76.24%), Query Frame = 1
Query:  199 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            K+I F + +R AM AG+DKL+DAV +TLGP+GRNVVLD+ F +P + NDGVTIA+ IEL DP EN GA L+ EVA+KTN+ AGDGTTTA+VLA+ +I+ GL +VTSGANPV +++GIDK V   +EEL   ++ +  +++I  V +ISA  D+ IG  I++A++KVG DGV++IE S  F+
Sbjct:    3 KEIKFSEDARRAMLAGVDKLADAVKVTLGPKGRNVVLDKKFVAPLITNDGVTIAKEIELEDPYENMGAKLVAEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGIRQGIDKAVAVALEELAAISKTVSSKEEIAQVGSISAA-DEEIGQFISEAMEKVGNDGVITIEESKGFK 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLOTE (60 kDa chaperonin OS=Clostridium tetani GN=groL PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.246e-48
Identity = 98/180 (54.44%), Postives = 139/180 (77.22%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I F + +R +MQ G+D L+D V +T+GP+GRNVVLD+ FG+P + NDGVTIAR IEL D  EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT GANP+ ++RGI   V   V+ +++ ++P+EG++DI  VA ISA +D  IG +IADA++KVG +GV+++E S++
Sbjct:    4 AKSIMFGEDARRSMQKGVDILADTVKVTMGPKGRNVVLDKKFGAPLITNDGVTIAREIELEDAYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTGGANPMLVRRGIQMAVEEAVKGIKEISKPVEGKEDIARVAAISA-DDKEIGKLIADAMEKVGNEGVITVEESNT 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH603_BRASO (60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain ORS278) GN=groL3 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.246e-48
Identity = 94/183 (51.37%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G+D L++AV +TLGP+GRNVV+++ FG+P++  DGVT+A+ IEL D  EN GA ++REVASKTND AGDGTTTA+VLA+ I++ G  +V +G NP+ LKRGID  V  +++++EKRA+P+    ++  V TISA  D  IG MIA A+ KVG +GV+++E + S E
Sbjct:    2 AAKDVKFSGDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDTAVAAVIKDIEKRAKPVASSAEVAQVGTISANGDAAIGKMIAQAMQKVGNEGVITVEENKSLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_PARUW (60 kDa chaperonin 2 OS=Protochlamydia amoebophila (strain UWE25) GN=groL2 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.246e-48
Identity = 97/183 (53.01%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK I F + +R  +  G+  L+DAV +TLGP+GRNVV+D+ +G+P +  DGVT+A+ IEL D  EN GA +++EVASKT D AGDGTTTA+VLA  I   GL +V +GANP+ LKRG++K V  +V+EL+KR++ ++ R++I  VATISA ND  IG MIA AI+KVG DG +++E    FE
Sbjct:    2 AAKIIKFKEDARQKILKGVRTLADAVKVTLGPKGRNVVIDKSYGTPHITKDGVTVAKEIELEDKFENMGAQMVKEVASKTADKAGDGTTTATVLAEAIYSEGLRNVAAGANPLDLKRGMEKAVKVIVQELKKRSKTVDDRNEIAQVATISANNDAEIGEMIAQAIEKVGRDGTITVEEGKGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_THELT (60 kDa chaperonin OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=groL PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.464e-48
Identity = 95/181 (52.49%), Postives = 138/181 (76.24%), Query Frame = 1
Query:  199 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            K + FD+ +R +++ G++K++DAV +TLGP+GRNVV+++ +GSP + NDGV+IA+ IEL D  EN GA L++EVASKTND AGDGTTTA+VLA+ +I+ GL +V +G+NP+ LKRGIDK      + ++ +A+ + GR+DI  VA ISA N   IG +IA+A+DKVG DGV+++E S + E
Sbjct:    3 KLLRFDEEARRSLEKGVNKVADAVRITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQSMIREGLKNVAAGSNPILLKRGIDKATEKAAKYIKDKAKKLSGREDIAHVAAISA-NSSEIGDLIAEAMDKVGEDGVITVEDSKTLE 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PROMH (60 kDa chaperonin OS=Proteus mirabilis (strain HI4320) GN=groL PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.464e-48
Identity = 98/183 (53.55%), Postives = 133/183 (72.68%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V G VEEL+K + P      I  V TISA +D+ +GT+IA A++KVG +GV+++E  +  E
Sbjct:    2 AAKDVKFGIDARNKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIIAEGLKAVAAGMNPMDLKRGIDKAVVGAVEELKKLSVPCSDTKAIAQVGTISANSDETVGTLIAQAMEKVGKEGVITVEEGTGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NITSB (60 kDa chaperonin OS=Nitratiruptor sp. (strain SB155-2) GN=groL PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.464e-48
Identity = 94/183 (51.37%), Postives = 135/183 (73.77%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK+I F   +R  +  G+ KL+DAV +T+GPRGRNV++ + FGSP +  DGV++A+ IEL + +EN GA L++EVASKT D AGDGTTTA+VLA  I K GL ++T+GANP+ +KRG+DK    +V EL+K A+ ++ + +I  VATISA ND  IG +IA+A++KVG DGV+++E   S +
Sbjct:    2 AAKEIHFSDIARGELFEGVKKLADAVKVTMGPRGRNVLIQKSFGSPSITKDGVSVAKEIELPNTVENMGAQLVKEVASKTADEAGDGTTTATVLAYNIFKEGLRNITAGANPIEVKRGMDKAAEAIVAELKKIAKEVKDKKEIAQVATISANNDPKIGELIAEAMEKVGKDGVITVEEGKSLQ 184          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_RHISN5.548e-4852.4960 kDa chaperonin 2 OS=Rhizobium sp. (strain NGR23... [more]
CH602_FRAAA5.548e-4852.4960 kDa chaperonin 2 OS=Frankia alni (strain ACN14a... [more]
CH60_WIGBR7.246e-4852.4660 kDa chaperonin OS=Wigglesworthia glossinidia br... [more]
CH60_MACCJ7.246e-4855.2560 kDa chaperonin OS=Macrococcus caseolyticus (str... [more]
CH60_CLOTE7.246e-4854.4460 kDa chaperonin OS=Clostridium tetani GN=groL PE... [more]
CH603_BRASO7.246e-4851.3760 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain ... [more]
CH602_PARUW7.246e-4853.0160 kDa chaperonin 2 OS=Protochlamydia amoebophila ... [more]
CH60_THELT9.464e-4852.4960 kDa chaperonin OS=Thermotoga lettingae (strain ... [more]
CH60_PROMH9.464e-4853.5560 kDa chaperonin OS=Proteus mirabilis (strain HI4... [more]
CH60_NITSB9.464e-4851.3760 kDa chaperonin OS=Nitratiruptor sp. (strain SB1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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