CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_MOOTA (60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL1 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.236e-47
Identity = 97/179 (54.19%), Postives = 138/179 (77.09%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            +AK +AFD  +R A++ G+  ++ AV +TLGP+GRNVVL+ +FGSP +  DGVT+A+ IEL DP EN GA L REVASKTND AGDGTTTA+VLA+ I+  GL +V +GANP+ +K+GID+ V  +V+E++K + P+E ++ I  VA+I+A N+  IG +IADA++KVG DGV+++E S
Sbjct:    2 AAKQLAFDVEARRALEKGVSTVAQAVKVTLGPKGRNVVLERKFGSPVITKDGVTVAKEIELKDPYENMGAQLCREVASKTNDVAGDGTTTATVLAQAIMLEGLKNVAAGANPIFVKKGIDRAVETVVDEIKKISIPVESKESIAHVASIAA-NEREIGELIADAMEKVGKDGVITVEES 179          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.236e-47
Identity = 94/183 (51.37%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G+D L++AV +TLGP+GRNVV+++ FG+P++  DGVT+A+ IEL D  EN GA ++REVASKTND AGDGTTTA+VLA+ I++ G  +V +G NP+ LKRGID  V  +++++EKRA+P+    ++  V TISA  D  IG MIA A+ KVG +GV+++E + S E
Sbjct:    2 AAKDVKFAGDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDTAVAAVIKDIEKRAKPVASSAEVAQVGTISANGDAAIGKMIAQAMQKVGNEGVITVEENKSLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_THEBR (60 kDa chaperonin OS=Thermoanaerobacter brockii GN=groL PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.614e-47
Identity = 96/180 (53.33%), Postives = 138/180 (76.67%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I + + +R A++ G++ ++D V +TLGPRGRNVVLD+ +GSP V NDGVTIAR IEL DP EN GA L++E A+KTND AGDGTTTA++LA+ +++ GL ++ +GANP+ L+RGI K V   VE L++ ++PI+ ++ I  VA+ISA  D+ IG +IA+A+DKVG DGV+++E S +
Sbjct:    2 AKQIKYGEEARRALERGVNAVADTVKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIELEDPFENQGAQLLKEAATKTNDIAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIAKAVDAAVEGLKRISKPIDNKESIAHVASISAA-DEEIGKLIAEAMDKVGKDGVITVEESKT 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PARDN (60 kDa chaperonin OS=Parascardovia denticolens GN=groL PE=3 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.614e-47
Identity = 94/181 (51.93%), Postives = 138/181 (76.24%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK I +D+ +R  M  G+D+L++ V +TLGP+GRNVVLD+ +G+P + NDGV+IA+ I+L DP +  GA L++EVA KT+D AGDGTTTA+VLA+ ++  GL +VTSG+NP++L+RGI+K    +V+ L + A+P+E +D I A ATISAG D  +G  IA+A+DKVG DGV+++E ++ F
Sbjct:    2 AKIIKYDEEARQGMLEGLDELANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEIDLEDPYQRIGAELVKEVAKKTDDVAGDGTTTATVLAQALVHEGLKNVTSGSNPIALRRGIEKASQTIVKNLLENAKPVETKDQIAATATISAG-DPEVGEKIAEALDKVGQDGVVTVEDNNKF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NEIGO (60 kDa chaperonin OS=Neisseria gonorrhoeae GN=groL PE=1 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 1.614e-47
Identity = 95/183 (51.91%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F    R  M  G++ L++AV +TLGP+GRNVV+D  FG P +  DGVT+A+ IEL D  EN GA +++EVASKTND AGDGTTTA+VLA+ I+  G+ +VT+G NP  LKRGIDK V  LVEEL+  A+P +   +I  V +ISA +D+ +G +IA+A++KVG +GV+++E   S E
Sbjct:    2 AAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGIKAVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_COREQ (60 kDa chaperonin OS=Corynebacterium equii GN=groL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.614e-47
Identity = 96/181 (53.04%), Postives = 138/181 (76.24%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP+ LKRGI+K V  +  +L   A+ +E ++ I A A ISAG D  IG +IA+A+DKVG +GV+++E S+SF
Sbjct:    2 AKIIAFDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEAVTAKLLDTAKEVETKEQIAATAGISAG-DSTIGELIAEAMDKVGKEGVITVEESNSF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLFF (60 kDa chaperonin OS=Chlamydophila felis (strain Fe/C-56) GN=groL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.614e-47
Identity = 95/183 (51.91%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK+I +++ +R  +  G+  L++AV +TLGP+GR+VV+D+ FGSP+V  DGVT+A+ IEL D  EN GA +++EVASKT D AGDGTTTA+VLA  I   GL +VT+GANP+ LKRGIDK V  +V+E++K ++P++   +I  VATISA ND  IG +IA+A++KVG +G +++E +  FE
Sbjct:    2 AAKNIKYNEDARKKIHKGVKTLAEAVKVTLGPKGRHVVIDKSFGSPQVTKDGVTVAKEIELEDKHENMGAQMVKEVASKTADKAGDGTTTATVLAEAIYSEGLRNVTAGANPMDLKRGIDKAVKVVVDEIKKISKPVQHHKEIAQVATISANNDAEIGNLIAEAMEKVGKNGSITVEEAKGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACTPL (60 kDa chaperonin OS=Actinobacillus pleuropneumoniae GN=groL PE=3 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 1.614e-47
Identity = 93/183 (50.82%), Postives = 135/183 (73.77%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ +G+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V  +VEEL+  ++P E   +I+ V TISA +D+ +G +IA A++KVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAVVEELKAISKPCETSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDGTGLD 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACTPJ (60 kDa chaperonin OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=groL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.614e-47
Identity = 93/183 (50.82%), Postives = 135/183 (73.77%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ +G+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V  +VEEL+  ++P E   +I+ V TISA +D+ +G +IA A++KVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAVVEELKAISKPCETSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDGTGLD 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACTP7 (60 kDa chaperonin OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=groL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.614e-47
Identity = 93/183 (50.82%), Postives = 135/183 (73.77%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ +G+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V  +VEEL+  ++P E   +I+ V TISA +D+ +G +IA A++KVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAVVEELKAISKPCETSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDGTGLD 184          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_MOOTA1.236e-4754.1960 kDa chaperonin 1 OS=Moorella thermoacetica (str... [more]
CH601_BRASB1.236e-4751.3760 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ... [more]
CH60_THEBR1.614e-4753.3360 kDa chaperonin OS=Thermoanaerobacter brockii GN... [more]
CH60_PARDN1.614e-4751.9360 kDa chaperonin OS=Parascardovia denticolens GN=... [more]
CH60_NEIGO1.614e-4751.9160 kDa chaperonin OS=Neisseria gonorrhoeae GN=groL... [more]
CH60_COREQ1.614e-4753.0460 kDa chaperonin OS=Corynebacterium equii GN=groL... [more]
CH60_CHLFF1.614e-4751.9160 kDa chaperonin OS=Chlamydophila felis (strain F... [more]
CH60_ACTPL1.614e-4750.8260 kDa chaperonin OS=Actinobacillus pleuropneumoni... [more]
CH60_ACTPJ1.614e-4750.8260 kDa chaperonin OS=Actinobacillus pleuropneumoni... [more]
CH60_ACTP71.614e-4750.8260 kDa chaperonin OS=Actinobacillus pleuropneumoni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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