CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_STAHJ (60 kDa chaperonin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=groL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 99/182 (54.40%), Postives = 137/182 (75.27%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKD+ F + +R AM  G+DKL++AV +T+GP+GRNVVLD E+ +P + NDGVTIA+ IEL DP EN GA L++EVA+KTN+ AGDGTTTA+VLA+ +I+ GL +VTSGANPV L+ GIDK V   V+ L   ++ +E +++I  V  ISA  D+ IG  I++A+DKVG DGV++IE S+  +
Sbjct:    2 AKDLKFSEDARQAMLRGVDKLANAVKVTIGPKGRNVVLDKEYVAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLREGIDKAVRVAVQALHDISQKVENKNEIAQVGAISAA-DEEIGKYISEAMDKVGNDGVITIEESNGLD 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PEDPA (60 kDa chaperonin OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=groL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 96/178 (53.93%), Postives = 133/178 (74.72%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AK+I F + +R  M  G+DKL+D V  T+GP+GRNVVL++ +GSP + NDGVTIA+AIEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I+  G+ +VT+GANPV ++RGI+K     VE L K +  ++ +DDI  +A+IS+ N + +G +IA+A++KVG DGV++IE S
Sbjct:    2 AKEIKFSEDARTKMLKGVDKLADTVKSTIGPKGRNVVLEQSYGSPTITNDGVTIAKAIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVNEGMKNVTAGANPVGIRRGIEKATSKAVEALHKMSHEVKTKDDIAQIASISSANPE-VGKLIANAMEKVGNDGVITIEES 178          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LEPCP (60 kDa chaperonin OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=groL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 94/183 (51.37%), Postives = 137/183 (74.86%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +RA M  G++ L++AV +TLGP+GRNVVL+  FG+P V  DGV++A+ IEL D ++N GA +++EVASKT+D+AGDGTTTA+VLA+ I++ G+  V +G NP+ LKRGIDK VH LV EL+K ++      +I  V +ISA +D+ IGT+IA+A+DKVG +GV+++E   S +
Sbjct:    2 AAKDVIFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVHALVAELKKASKATTTSKEIAQVGSISANSDESIGTIIANAMDKVGKEGVITVEDGKSLD 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_JANSC (60 kDa chaperonin OS=Jannaschia sp. (strain CCS1) GN=groL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 95/182 (52.20%), Postives = 131/182 (71.98%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKD+ FD  +R  M  G++ L+DAV +TLGP+GRNVV+D+ FG+P++  DGV++A+ IEL D  EN GA +++EVAS+TND AGDGTTTA+VLA+ IIK GL SV +G NP+ LKRGID  V  ++ E++  AR +   D++  V TISA  +  IG  IADA+ KVG DGV+++E +   E
Sbjct:    2 AKDVRFDTDARNRMLKGVNTLADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKSVAAGMNPMDLKRGIDLAVTKVIAEIQGSAREVADSDEVAQVGTISANGEAEIGRQIADAMQKVGNDGVITVEENKGLE 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACIBY (60 kDa chaperonin OS=Acinetobacter baumannii (strain AYE) GN=groL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            SAKD+ F   +R+ M AG++ L+DAV +TLGP+GRNVV+D  FG+P +  DGVT+A+ I L D  EN GA L+REV+SKTND AGDGTTTA+VLA+ I+  G+ SVT+G NP+ LKRGID  V  +VE +   A+P +    I+ V +ISA +D  +G +IA A++KVG +GV+++E  S FE
Sbjct:    2 SAKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACIBT (60 kDa chaperonin OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=groL PE=3 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            SAKD+ F   +R+ M AG++ L+DAV +TLGP+GRNVV+D  FG+P +  DGVT+A+ I L D  EN GA L+REV+SKTND AGDGTTTA+VLA+ I+  G+ SVT+G NP+ LKRGID  V  +VE +   A+P +    I+ V +ISA +D  +G +IA A++KVG +GV+++E  S FE
Sbjct:    2 SAKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACIBS (60 kDa chaperonin OS=Acinetobacter baumannii (strain SDF) GN=groL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            SAKD+ F   +R+ M AG++ L+DAV +TLGP+GRNVV+D  FG+P +  DGVT+A+ I L D  EN GA L+REV+SKTND AGDGTTTA+VLA+ I+  G+ SVT+G NP+ LKRGID  V  +VE +   A+P +    I+ V +ISA +D  +G +IA A++KVG +GV+++E  S FE
Sbjct:    2 SAKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACIBC (60 kDa chaperonin OS=Acinetobacter baumannii (strain ACICU) GN=groL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            SAKD+ F   +R+ M AG++ L+DAV +TLGP+GRNVV+D  FG+P +  DGVT+A+ I L D  EN GA L+REV+SKTND AGDGTTTA+VLA+ I+  G+ SVT+G NP+ LKRGID  V  +VE +   A+P +    I+ V +ISA +D  +G +IA A++KVG +GV+++E  S FE
Sbjct:    2 SAKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACIB5 (60 kDa chaperonin OS=Acinetobacter baumannii (strain AB0057) GN=groL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            SAKD+ F   +R+ M AG++ L+DAV +TLGP+GRNVV+D  FG+P +  DGVT+A+ I L D  EN GA L+REV+SKTND AGDGTTTA+VLA+ I+  G+ SVT+G NP+ LKRGID  V  +VE +   A+P +    I+ V +ISA +D  +G +IA A++KVG +GV+++E  S FE
Sbjct:    2 SAKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACIB3 (60 kDa chaperonin OS=Acinetobacter baumannii (strain AB307-0294) GN=groL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            SAKD+ F   +R+ M AG++ L+DAV +TLGP+GRNVV+D  FG+P +  DGVT+A+ I L D  EN GA L+REV+SKTND AGDGTTTA+VLA+ I+  G+ SVT+G NP+ LKRGID  V  +VE +   A+P +    I+ V +ISA +D  +G +IA A++KVG +GV+++E  S FE
Sbjct:    2 SAKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEISLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGIDIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEGSGFE 184          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_STAHJ2.108e-4754.4060 kDa chaperonin OS=Staphylococcus haemolyticus (... [more]
CH60_PEDPA2.108e-4753.9360 kDa chaperonin OS=Pediococcus pentosaceus (stra... [more]
CH60_LEPCP2.108e-4751.3760 kDa chaperonin OS=Leptothrix cholodnii (strain ... [more]
CH60_JANSC2.108e-4752.2060 kDa chaperonin OS=Jannaschia sp. (strain CCS1) ... [more]
CH60_ACIBY2.108e-4752.4660 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]
CH60_ACIBT2.108e-4752.4660 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]
CH60_ACIBS2.108e-4752.4660 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]
CH60_ACIBC2.108e-4752.4660 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]
CH60_ACIB52.108e-4752.4660 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]
CH60_ACIB32.108e-4752.4660 kDa chaperonin OS=Acinetobacter baumannii (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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