CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH603_FRAAA (60 kDa chaperonin 3 OS=Frankia alni (strain ACN14a) GN=groL3 PE=3 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 95/181 (52.49%), Postives = 140/181 (77.35%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVL-DEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G+++L+DAV +TLGP+GRNVVL ++FG P + NDGV+IAR IEL +  E  GA L++EVA KTND AGDGTTTA++LA+ +++ GL +V +GANP+ LK+GI+  V  + EEL K+A+ +E ++ I + A+ISAG D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKMIAFDEEARRGLERGMNRLADAVKVTLGPKGRNVVLANKFGLPTITNDGVSIAREIELENSYERIGAELVKEVAKKTNDVAGDGTTTATILAQALVREGLRNVAAGANPLGLKKGIEVAVERVSEELSKQAKEVETKEQIASTASISAG-DSAIGGLIAEALDKVGKEGVVTVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_RHOBA (60 kDa chaperonin 2 OS=Rhodopirellula baltica GN=groL2 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 90/180 (50.00%), Postives = 130/180 (72.22%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK + F+  +RA M AG++KL+ AV  T+GP GRNV++D+ FG P V  DGVT+A+ IEL D  EN GA L+ EVA KT+D AGDGTTTA+VLAR I K GL ++ +G+NP +++RGI+K V    ++L +  RP+ G+ ++  V  ISA ND++IG ++ADA+++VG DGV+++E   S
Sbjct:    2 AKQLLFEDHARARMLAGVEKLAKAVATTMGPTGRNVIIDKSFGGPTVTKDGVTVAKEIELEDRFENMGAKLVIEVAQKTSDLAGDGTTTATVLARAIFKEGLRNIVAGSNPTAIRRGIEKAVEAACDQLVEMGRPVSGKQEVAHVGAISANNDNVIGELLADALERVGKDGVITVEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_RHILO (60 kDa chaperonin 2 OS=Rhizobium loti GN=groL2 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 95/183 (51.91%), Postives = 133/183 (72.68%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK++ F   +R  M  G++ L+DAV +TLGP+GRNVV+D+ FG+P++  DGVT+A+ IEL D  EN GA ++REVASKT+D AGDGTTTA+VLA+ I+K G  +V SG NP+ LKRGIDK V  +V+EL+  AR +   D+I  V TISA  D  IG  +A+A+ KVG +GV+++E + + E
Sbjct:    2 AAKEVKFHSDAREKMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTSDLAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGIDKAVEAIVQELKTNARKVTRNDEIAQVGTISANGDAEIGRFLAEAMQKVGNEGVITVEEAKTAE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_SYNPW (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH7803) GN=groL1 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 96/180 (53.33%), Postives = 139/180 (77.22%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK + F   SRAA++ G++ L+DAV +T+GPRGRNVVL++ FG+P +VNDG TIA+ I+L DP EN GA LI++VASKT D AGDGTTTA+VLA+ +++ GL +  +GA+P+ L+RG++K V  +V+ L +R++ + G D I+ VAT+SAG DD +G M+A+A+DKV  DGV+++E S S
Sbjct:    2 AKLLKFSDESRAALERGMNALADAVRVTIGPRGRNVVLEKSFGAPDIVNDGDTIAKEIDLEDPFENIGAKLIQQVASKTKDKAGDGTTTATVLAQAMVEEGLRNTAAGASPIELRRGMEKAVALIVKGLGERSQSVSG-DAIRQVATVSAGGDDEVGRMVAEAMDKVTVDGVITVEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_MYCGI (60 kDa chaperonin 1 OS=Mycobacterium gilvum (strain PYR-GCK) GN=groL1 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.108e-47
Identity = 95/181 (52.49%), Postives = 139/181 (76.80%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IA+D+ +R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP+ LKRGI+K V  + + L K A+ +E ++ I A A ISAG D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKTIAYDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEAVTQGLLKSAKEVETKEQIAATAAISAG-DVQIGELIAEAMDKVGNEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3)

HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47
Identity = 99/189 (52.38%), Postives = 140/189 (74.07%), Query Frame = 1
Query:  181 AVRASAKDIAF--DQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            A+  +AK++ F  D  +   +QAG++KL+D VG+TLGP+GRNVVL+ ++GSP++VNDGVT+AR +EL DP+EN GA L+R+ A+KTND AGDGTTT+ VLA+  I  G+  V +GANPV + RGI+KT   LV EL+K ++ +E   ++  VA +SAGN+D IG MIA+A+ KVG  GV+++E   S E
Sbjct:   51 AIVCAAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVTELKKMSKEVED-SELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLEEGKSAE 238          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_STRA5 (60 kDa chaperonin OS=Streptococcus agalactiae serotype V GN=groL PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47
Identity = 97/182 (53.30%), Postives = 135/182 (74.18%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F   +R+AM  G+D L+D V +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I++ GL +VT+GANP+ ++RGI+  V   VEEL++ A+P+ G++ I  VA +S+   + +G  I++A+++VG DGV++IE S   E
Sbjct:    2 AKDIKFSADARSAMVRGVDILADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIETAVSAAVEELKEIAQPVSGKEAIAQVAAVSS-RSEKVGEYISEAMERVGNDGVITIEESRGME 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_STRA1 (60 kDa chaperonin OS=Streptococcus agalactiae serotype Ia GN=groL PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47
Identity = 97/182 (53.30%), Postives = 135/182 (74.18%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F   +R+AM  G+D L+D V +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I++ GL +VT+GANP+ ++RGI+  V   VEEL++ A+P+ G++ I  VA +S+   + +G  I++A+++VG DGV++IE S   E
Sbjct:    2 AKDIKFSADARSAMVRGVDILADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIETAVSAAVEELKEIAQPVSGKEAIAQVAAVSS-RSEKVGEYISEAMERVGNDGVITIEESRGME 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SCAIO (60 kDa chaperonin OS=Scardovia inopinata GN=groL PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47
Identity = 94/181 (51.93%), Postives = 136/181 (75.14%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK I +D+ +R  M  G+D+L++ V +TLGPRGRNVVLD+ +G+P + NDGV+IA+ I+L DP    GA L++EVA KT+D AGDGTTTA+VLA+ ++  GL +VT+G+NP++L+RGI+K    +VE L   A+P+E ++ I A ATISAG D  +G  IA+A+DKVG DGV+++E ++ F
Sbjct:    2 AKIIKYDEEARQGMLEGLDELANTVKVTLGPRGRNVVLDKTYGAPTITNDGVSIAKEIDLEDPYARIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLRNVTAGSNPIALRRGIEKASDAIVERLLSNAKPVETKEQIAATATISAG-DPEVGDKIAEALDKVGQDGVVTVEDNNKF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_METPP (60 kDa chaperonin OS=Methylibium petroleiphilum (strain PM1) GN=groL PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47
Identity = 94/181 (51.93%), Postives = 136/181 (75.14%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            +AKD+ F   +RA M  G++ L++AV +TLGP+GRNVVL+  FG+P V  DGV++A+ IEL D ++N GA +++EVASKT+D+AGDGTTTA+VLA+ I++ G+  V +G NP+ LKRGIDK V  LVE+L+K+++P     +I  V TISA +DD +G +IA A+DKVG +GV+++E   S
Sbjct:    2 AAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVVSLVEQLKKQSKPTTTSKEIAQVGTISANSDDDVGQIIASAMDKVGKEGVITVEDGKS 182          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH603_FRAAA2.108e-4752.4960 kDa chaperonin 3 OS=Frankia alni (strain ACN14a... [more]
CH602_RHOBA2.108e-4750.0060 kDa chaperonin 2 OS=Rhodopirellula baltica GN=g... [more]
CH602_RHILO2.108e-4751.9160 kDa chaperonin 2 OS=Rhizobium loti GN=groL2 PE=... [more]
CH601_SYNPW2.108e-4753.3360 kDa chaperonin 1 OS=Synechococcus sp. (strain W... [more]
CH601_MYCGI2.108e-4752.4960 kDa chaperonin 1 OS=Mycobacterium gilvum (strai... [more]
RUBB_ARATH2.754e-4752.38RuBisCO large subunit-binding protein subunit beta... [more]
CH60_STRA52.754e-4753.3060 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_STRA12.754e-4753.3060 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_SCAIO2.754e-4751.9360 kDa chaperonin OS=Scardovia inopinata GN=groL P... [more]
CH60_METPP2.754e-4751.9360 kDa chaperonin OS=Methylibium petroleiphilum (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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