CX671660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_DESMR (60 kDa chaperonin OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=groL PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47 Identity = 93/183 (50.82%), Postives = 136/183 (74.32%), Query Frame = 1 Query: 193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 +AK+I FD ++R ++ G+DKL++AV +TLGP+GRNVV+++ FGSP + DGVT+A+ IEL D EN GA +++EVASKT+D AGDGTTTA++LA+ I G+ V +G NP+++KRGIDK V +V ELE A+P + +I V TISA +D IG +IA+A++KVG +GV+++E + E Sbjct: 2 AAKEILFDSKAREKLKRGVDKLANAVKVTLGPKGRNVVIEKSFGSPIITKDGVTVAKEIELEDKFENMGAQMVKEVASKTSDIAGDGTTTATILAQAIFTEGVKLVAAGRNPMAIKRGIDKAVASVVAELETLAKPTRDQKEIAQVGTISANSDATIGNIIAEAMNKVGKEGVITVEEAKGME 184
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH604_RHIEC (60 kDa chaperonin 4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL4 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47 Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = 1 Query: 193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 +AK++ F +R M G+D L++AV +TLGP+GRNVV+D+ FG+P++ DGV++A+ IEL D EN GA ++REVASKT+D AGDGTTTA+VLA+ I+K G +VTSG NP+ LKRGID V +VEEL+ AR I +I V TISA D IG +A+A+ KVG DGV+++E + + E Sbjct: 2 AAKEVKFSVEAREKMLRGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVTSGMNPMDLKRGIDLAVSAIVEELKANARKISNNAEIAQVGTISANGDAEIGRFLAEAVQKVGNDGVITVEEAKTAE 184
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_ECOK1 (60 kDa chaperonin 2 OS=Escherichia coli O1:K1 / APEC GN=groL2 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47 Identity = 96/183 (52.46%), Postives = 136/183 (74.32%), Query Frame = 1 Query: 193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 +AKDI F + +RA M G++ L++AV TLGP+GRNVVL++ FG+P + DGV++A+ IELAD EN GA +++EVASKT+D+AGDGTTTA+VLA+ +I+ G+ +V +G NP+ LKRGIDK V VEEL+K ++P +I V +ISA +D IG +IA A+DKVG +GV+++E S E Sbjct: 2 AAKDIRFGEDARARMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTSDNAGDGTTTATVLAQALIREGMKAVAAGMNPMDLKRGIDKAVTSAVEELKKISKPCSTSKEIAQVGSISANSDTDIGELIAKAMDKVGKEGVITVEEGSGLE 184
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_SALTO (60 kDa chaperonin 1 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=groL1 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47 Identity = 95/181 (52.49%), Postives = 142/181 (78.45%), Query Frame = 1 Query: 196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735 AK IAFD+ +R ++ G+++L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP++LKRGI+ V + EEL K A+ +E ++ I + A+ISAG D +G +IA+A+DKVG +GV+++E S++F Sbjct: 2 AKMIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVAAGANPMALKRGIETAVASVSEELLKLAKDVETKEQIASTASISAG-DPSVGEIIAEAMDKVGKEGVITVEESNTF 181
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_SALAI (60 kDa chaperonin 1 OS=Salinispora arenicola (strain CNS-205) GN=groL1 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47 Identity = 95/181 (52.49%), Postives = 142/181 (78.45%), Query Frame = 1 Query: 196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735 AK IAFD+ +R ++ G+++L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP++LKRGI+ V + EEL K A+ +E ++ I + A+ISAG D +G +IA+A+DKVG +GV+++E S++F Sbjct: 2 AKMIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVAAGANPMALKRGIETAVASVSEELLKLAKDVETKEQIASTASISAG-DPSVGEIIAEAMDKVGKEGVITVEESNTF 181
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SODGM (60 kDa chaperonin OS=Sodalis glossinidius (strain morsitans) GN=groL PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47 Identity = 96/183 (52.46%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 +AKD+ F +R M G++ L+DAV +TLGP+GRNVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND+AGDGTTTA+VLA+ I+ GL +V +G NP+ LKRGIDK V VEEL+K + P I V TISA D+ +GT+IA+A+ KVG +GV+++E S + Sbjct: 2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKKLSVPCSDSKAIAQVGTISANADETVGTLIAEAMAKVGKEGVITVEEGSGLQ 184
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SODGL (60 kDa chaperonin OS=Sodalis glossinidius GN=groL PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47 Identity = 96/183 (52.46%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 +AKD+ F +R M G++ L+DAV +TLGP+GRNVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND+AGDGTTTA+VLA+ I+ GL +V +G NP+ LKRGIDK V VEEL+K + P I V TISA D+ +GT+IA+A+ KVG +GV+++E S + Sbjct: 2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKKLSVPCSDSKAIAQVGTISANADETVGTLIAEAMAKVGKEGVITVEEGSGLQ 184
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47 Identity = 96/179 (53.63%), Postives = 137/179 (76.54%), Query Frame = 1 Query: 199 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732 K++ F+ +R A++ G++KL+DAV +TLGP+G+ VVLD+ FGSP + NDGVTIAR IEL D EN GA L++EVA+KTND AGDGTTTA+VLA+ I++ GL +V +GANPV L+ GI+K V VE + ++A+ I G+D+I V ISA +++ +G +IA+AIDKVG DGV+++E + Sbjct: 4 KELKFNTEARQALERGVNKLADAVKVTLGPKGQYVVLDKKFGSPTITNDGVTIAREIELEDIFENQGAQLLKEVATKTNDVAGDGTTTATVLAQIIVREGLKNVAAGANPVILRNGIEKAVEKAVEAIREQAKEISGKDEIARVGAISARSEE-VGNVIAEAIDKVGKDGVVNVEEGQT 181
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NEIMF (60 kDa chaperonin OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=groL PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47 Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 +AKD+ F R M G++ L++AV +TLGP+GRNVV+D FG P + DGVT+A+ IEL D EN GA +++EVASKTND AGDGTTTA+VLA+ I+ G+ VT+G NP LKRGIDK V LVEEL+ A+P + +I V +ISA +D+ +G +IA+A++KVG +GV+++E S E Sbjct: 2 AAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLE 184
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NEIMA (60 kDa chaperonin OS=Neisseria meningitidis serogroup A GN=groL PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47 Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738 +AKD+ F R M G++ L++AV +TLGP+GRNVV+D FG P + DGVT+A+ IEL D EN GA +++EVASKTND AGDGTTTA+VLA+ I+ G+ VT+G NP LKRGIDK V LVEEL+ A+P + +I V +ISA +D+ +G +IA+A++KVG +GV+++E S E Sbjct: 2 AAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLE 184 The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bpback to top |