CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_DESMR (60 kDa chaperonin OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=groL PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47
Identity = 93/183 (50.82%), Postives = 136/183 (74.32%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK+I FD ++R  ++ G+DKL++AV +TLGP+GRNVV+++ FGSP +  DGVT+A+ IEL D  EN GA +++EVASKT+D AGDGTTTA++LA+ I   G+  V +G NP+++KRGIDK V  +V ELE  A+P   + +I  V TISA +D  IG +IA+A++KVG +GV+++E +   E
Sbjct:    2 AAKEILFDSKAREKLKRGVDKLANAVKVTLGPKGRNVVIEKSFGSPIITKDGVTVAKEIELEDKFENMGAQMVKEVASKTSDIAGDGTTTATILAQAIFTEGVKLVAAGRNPMAIKRGIDKAVASVVAELETLAKPTRDQKEIAQVGTISANSDATIGNIIAEAMNKVGKEGVITVEEAKGME 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH604_RHIEC (60 kDa chaperonin 4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL4 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK++ F   +R  M  G+D L++AV +TLGP+GRNVV+D+ FG+P++  DGV++A+ IEL D  EN GA ++REVASKT+D AGDGTTTA+VLA+ I+K G  +VTSG NP+ LKRGID  V  +VEEL+  AR I    +I  V TISA  D  IG  +A+A+ KVG DGV+++E + + E
Sbjct:    2 AAKEVKFSVEAREKMLRGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVTSGMNPMDLKRGIDLAVSAIVEELKANARKISNNAEIAQVGTISANGDAEIGRFLAEAVQKVGNDGVITVEEAKTAE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_ECOK1 (60 kDa chaperonin 2 OS=Escherichia coli O1:K1 / APEC GN=groL2 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47
Identity = 96/183 (52.46%), Postives = 136/183 (74.32%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKDI F + +RA M  G++ L++AV  TLGP+GRNVVL++ FG+P +  DGV++A+ IELAD  EN GA +++EVASKT+D+AGDGTTTA+VLA+ +I+ G+ +V +G NP+ LKRGIDK V   VEEL+K ++P     +I  V +ISA +D  IG +IA A+DKVG +GV+++E  S  E
Sbjct:    2 AAKDIRFGEDARARMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELADKFENMGAQMVKEVASKTSDNAGDGTTTATVLAQALIREGMKAVAAGMNPMDLKRGIDKAVTSAVEELKKISKPCSTSKEIAQVGSISANSDTDIGELIAKAMDKVGKEGVITVEEGSGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_SALTO (60 kDa chaperonin 1 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=groL1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47
Identity = 95/181 (52.49%), Postives = 142/181 (78.45%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G+++L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP++LKRGI+  V  + EEL K A+ +E ++ I + A+ISAG D  +G +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKMIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVAAGANPMALKRGIETAVASVSEELLKLAKDVETKEQIASTASISAG-DPSVGEIIAEAMDKVGKEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_SALAI (60 kDa chaperonin 1 OS=Salinispora arenicola (strain CNS-205) GN=groL1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.754e-47
Identity = 95/181 (52.49%), Postives = 142/181 (78.45%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G+++L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP++LKRGI+  V  + EEL K A+ +E ++ I + A+ISAG D  +G +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKMIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVAAGANPMALKRGIETAVASVSEELLKLAKDVETKEQIASTASISAG-DPSVGEIIAEAMDKVGKEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SODGM (60 kDa chaperonin OS=Sodalis glossinidius (strain morsitans) GN=groL PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 96/183 (52.46%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V   VEEL+K + P      I  V TISA  D+ +GT+IA+A+ KVG +GV+++E  S  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKKLSVPCSDSKAIAQVGTISANADETVGTLIAEAMAKVGKEGVITVEEGSGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SODGL (60 kDa chaperonin OS=Sodalis glossinidius GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 96/183 (52.46%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V   VEEL+K + P      I  V TISA  D+ +GT+IA+A+ KVG +GV+++E  S  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKKLSVPCSDSKAIAQVGTISANADETVGTLIAEAMAKVGKEGVITVEEGSGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 96/179 (53.63%), Postives = 137/179 (76.54%), Query Frame = 1
Query:  199 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            K++ F+  +R A++ G++KL+DAV +TLGP+G+ VVLD+ FGSP + NDGVTIAR IEL D  EN GA L++EVA+KTND AGDGTTTA+VLA+ I++ GL +V +GANPV L+ GI+K V   VE + ++A+ I G+D+I  V  ISA +++ +G +IA+AIDKVG DGV+++E   +
Sbjct:    4 KELKFNTEARQALERGVNKLADAVKVTLGPKGQYVVLDKKFGSPTITNDGVTIAREIELEDIFENQGAQLLKEVATKTNDVAGDGTTTATVLAQIIVREGLKNVAAGANPVILRNGIEKAVEKAVEAIREQAKEISGKDEIARVGAISARSEE-VGNVIAEAIDKVGKDGVVNVEEGQT 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NEIMF (60 kDa chaperonin OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F    R  M  G++ L++AV +TLGP+GRNVV+D  FG P +  DGVT+A+ IEL D  EN GA +++EVASKTND AGDGTTTA+VLA+ I+  G+  VT+G NP  LKRGIDK V  LVEEL+  A+P +   +I  V +ISA +D+ +G +IA+A++KVG +GV+++E   S E
Sbjct:    2 AAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NEIMA (60 kDa chaperonin OS=Neisseria meningitidis serogroup A GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F    R  M  G++ L++AV +TLGP+GRNVV+D  FG P +  DGVT+A+ IEL D  EN GA +++EVASKTND AGDGTTTA+VLA+ I+  G+  VT+G NP  LKRGIDK V  LVEEL+  A+P +   +I  V +ISA +D+ +G +IA+A++KVG +GV+++E   S E
Sbjct:    2 AAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLE 184          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_DESMR2.754e-4750.8260 kDa chaperonin OS=Desulfovibrio magneticus (str... [more]
CH604_RHIEC2.754e-4752.4660 kDa chaperonin 4 OS=Rhizobium etli (strain CFN ... [more]
CH602_ECOK12.754e-4752.4660 kDa chaperonin 2 OS=Escherichia coli O1:K1 / AP... [more]
CH601_SALTO2.754e-4752.4960 kDa chaperonin 1 OS=Salinispora tropica (strain... [more]
CH601_SALAI2.754e-4752.4960 kDa chaperonin 1 OS=Salinispora arenicola (stra... [more]
CH60_SODGM3.596e-4752.4660 kDa chaperonin OS=Sodalis glossinidius (strain ... [more]
CH60_SODGL3.596e-4752.4660 kDa chaperonin OS=Sodalis glossinidius GN=groL ... [more]
CH60_RUBXD3.596e-4753.6360 kDa chaperonin OS=Rubrobacter xylanophilus (str... [more]
CH60_NEIMF3.596e-4751.9160 kDa chaperonin OS=Neisseria meningitidis serogr... [more]
CH60_NEIMA3.596e-4751.9160 kDa chaperonin OS=Neisseria meningitidis serogr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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