CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NEIM0 (60 kDa chaperonin OS=Neisseria meningitidis serogroup C (strain 053442) GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F    R  M  G++ L++AV +TLGP+GRNVV+D  FG P +  DGVT+A+ IEL D  EN GA +++EVASKTND AGDGTTTA+VLA+ I+  G+  VT+G NP  LKRGIDK V  LVEEL+  A+P +   +I  V +ISA +D+ +G +IA+A++KVG +GV+++E   S E
Sbjct:    2 AAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NEIG2 (60 kDa chaperonin OS=Neisseria gonorrhoeae (strain NCCP11945) GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F    R  M  G++ L++AV +TLGP+GRNVV+D  FG P +  DGVT+A+ IEL D  EN GA +++EVASKTND AGDGTTTA+VLA+ I+  G+  VT+G NP  LKRGIDK V  LVEEL+  A+P +   +I  V +ISA +D+ +G +IA+A++KVG +GV+++E   S E
Sbjct:    2 AAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NEIG1 (60 kDa chaperonin OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F    R  M  G++ L++AV +TLGP+GRNVV+D  FG P +  DGVT+A+ IEL D  EN GA +++EVASKTND AGDGTTTA+VLA+ I+  G+  VT+G NP  LKRGIDK V  LVEEL+  A+P +   +I  V +ISA +D+ +G +IA+A++KVG +GV+++E   S E
Sbjct:    2 AAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAFGGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HAEIN (60 kDa chaperonin OS=Haemophilus influenzae GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 91/183 (49.73%), Postives = 134/183 (73.22%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GR+V+LD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V  +V EL+  ++P E   +I+ V TISA +D ++G +I+ A++KVG +GV+++E  +  E
Sbjct:    2 AAKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRHVILDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVSAVVSELKNLSKPCETAKEIEQVGTISANSDSIVGQLISQAMEKVGKEGVITVEDGTGLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_GEOLS (60 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 93/183 (50.82%), Postives = 136/183 (74.32%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            SAK+I F++  R A+  G++ L+DAV +TLGP+GRNV++++ FGSP +  DGV++A+ +EL +  EN GA L++EVASKT+D AGDGTTTA+VLA+ I K G   V +G NP+ +KRGIDK V  +V EL+K ++PI+   +I  V TISA ND  IG +IA+A++KVG +GV+++E + + E
Sbjct:    2 SAKEIRFNEEGRNAILRGVNALADAVKVTLGPKGRNVIIEKSFGSPLITKDGVSVAKEVELENKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYKQGSKLVAAGHNPMEIKRGIDKAVEAIVAELQKISKPIKDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEAKAME 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ERWCT (60 kDa chaperonin OS=Erwinia carotovora subsp. atroseptica GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 95/183 (51.91%), Postives = 133/183 (72.68%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+K++ P      I  V TISA +D+ +G +IA+A++KVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKKQSVPCSDFKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEGTGLQ 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ENTIT (60 kDa chaperonin (Fragment) OS=Enterobacter intermedius GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 96/183 (52.46%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  E
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIIAEGLKAVAAGMNPMDLKRGIDKAVVAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ENTAS (60 kDa chaperonin (Fragment) OS=Enterobacter asburiae GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 96/183 (52.46%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  E
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ENTAG (60 kDa chaperonin (Fragment) OS=Enterobacter agglomerans GN=groL PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 96/183 (52.46%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  E
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVASAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_ROSDO (60 kDa chaperonin 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=groL1 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 92/183 (50.27%), Postives = 132/183 (72.13%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            SAKD+ FD  +R+ M  G++ L+DAV +TLGP+GRNVV+D+ FG+P++  DGVT+A+ IEL D  EN GA +++EVAS+TND AGDGTTT++VLA+ I+  G+ +V +G NP+ LKRGID     +VE ++  AR ++  D++  V TISA  +  IG  IADA+ KVG DGV+++E +   E
Sbjct:    2 SAKDVKFDTAARSRMLRGVNTLADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVKEVASRTNDQAGDGTTTSTVLAQAIVNEGMKAVAAGMNPMDLKRGIDLATSKVVEAIKAAARDVKDSDEVAQVGTISANGEAEIGRQIADAMQKVGNDGVITVEENKGLE 184
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_NEIM03.596e-4751.9160 kDa chaperonin OS=Neisseria meningitidis serogr... [more]
CH60_NEIG23.596e-4751.9160 kDa chaperonin OS=Neisseria gonorrhoeae (strain... [more]
CH60_NEIG13.596e-4751.9160 kDa chaperonin OS=Neisseria gonorrhoeae (strain... [more]
CH60_HAEIN3.596e-4749.7360 kDa chaperonin OS=Haemophilus influenzae GN=gro... [more]
CH60_GEOLS3.596e-4750.8260 kDa chaperonin OS=Geobacter lovleyi (strain ATC... [more]
CH60_ERWCT3.596e-4751.9160 kDa chaperonin OS=Erwinia carotovora subsp. atr... [more]
CH60_ENTIT3.596e-4752.4660 kDa chaperonin (Fragment) OS=Enterobacter inter... [more]
CH60_ENTAS3.596e-4752.4660 kDa chaperonin (Fragment) OS=Enterobacter asbur... [more]
CH60_ENTAG3.596e-4752.4660 kDa chaperonin (Fragment) OS=Enterobacter agglo... [more]
CH601_ROSDO3.596e-4750.2760 kDa chaperonin 1 OS=Roseobacter denitrificans (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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