CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ELUMP (60 kDa chaperonin OS=Elusimicrobium minutum (strain Pei191) GN=groL PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47
Identity = 95/180 (52.78%), Postives = 137/180 (76.11%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +   +RA M+AGI+K++ AV +TLGP+GR+VVL++ FGSP +++DGVTIA+ IEL D  EN GA LIREVASKTND AGDGTTTA+VL   I+  G+ ++T+GANP  +K+GI+  V  + EEL+K  RP+E +++   +ATISA ND ++G +IA+A++KVG +GV+++E   +
Sbjct:    2 AKQIVYGDEARAKMKAGIEKVAKAVSVTLGPKGRSVVLEKKFGSPLIIDDGVTIAKDIELEDKFENMGAQLIREVASKTNDIAGDGTTTATVLTHAILTEGIKNITAGANPTLVKKGIEMAVETVKEELKKMQRPVETKEEKAQIATISA-NDRMVGELIAEAMEKVGHEGVITVEEGKT 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_DIAST (60 kDa chaperonin OS=Diaphorobacter sp. (strain TPSY) GN=groL PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47
Identity = 96/183 (52.46%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +RA M  G++ L++AV +TLGP+GRNVVL+  FG+P V  DGV++A+ IEL D ++N GA L++EVASKTND AGDGTTTA+VLA+ I++ G   V +G NP+ LKRGIDK V  LVEEL+K ++      +I  V +ISA +D+ +G +IADA+DKVG +GV+++E   S E
Sbjct:    2 AAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASKTNDIAGDGTTTATVLAQAIVREGSKYVAAGLNPMDLKRGIDKAVVALVEELKKASKATTTSKEIAQVGSISANSDESVGKIIADAMDKVGKEGVITVEDGKSLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BUCBP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=groL PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47
Identity = 95/183 (51.91%), Postives = 130/183 (71.04%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA++LA+ I+  GL +V +G NP+ LKRGIDK V   VEEL   + P      I  V TISA  D+ +G++IADA+DKVG DGV+++E  +  +
Sbjct:    2 AAKDVKFGNEARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVISAVEELRIMSVPCADSKAITQVGTISANADEKVGSLIADAMDKVGKDGVITVEEGTGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BAUCH (60 kDa chaperonin OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=groL PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47
Identity = 95/183 (51.91%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK++ F   +R  M  G++ L+DAV +TLGPRGRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V G VEEL++ + P      I  V TISA +D+ +G +IA+A++KVG  GV+++E  S  +
Sbjct:    2 AAKEVKFGNEARIKMLRGVNVLADAVKVTLGPRGRNVVLDKSFGAPVITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGIDKAVIGAVEELKRLSVPCADSKAIAQVGTISANSDEKVGILIAEAMEKVGKKGVITVEEGSGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACISJ (60 kDa chaperonin OS=Acidovorax sp. (strain JS42) GN=groL PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47
Identity = 96/183 (52.46%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +RA M  G++ L++AV +TLGP+GRNVVL+  FG+P V  DGV++A+ IEL D ++N GA L++EVASKTND AGDGTTTA+VLA+ I++ G   V +G NP+ LKRGIDK V  LVEEL+K ++      +I  V +ISA +D+ +G +IADA+DKVG +GV+++E   S E
Sbjct:    2 AAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASKTNDIAGDGTTTATVLAQAIVREGSKYVAAGLNPMDLKRGIDKAVVALVEELKKASKATTTSKEIAQVGSISANSDESVGKIIADAMDKVGKEGVITVEDGKSLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ACEP3 (60 kDa chaperonin OS=Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=groL PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47
Identity = 95/183 (51.91%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G+D L+DAV +TLGP+GRNVVLD+ FG+P++  DGV++A+ IELAD  EN GA ++REVASKTND AGDGTTTA+VLA+ I++ G  +V +G NP+ LKRGIDK V  ++EEL+K A+ +    +   V TISA  +  IG MI++A+ KVG +GV+++E +  F+
Sbjct:    2 AAKDVKFGADARQRMLRGVDILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELADKFENMGAQMLREVASKTNDIAGDGTTTATVLAQAIVREGHKAVAAGMNPMDLKRGIDKAVAVVIEELKKNAKKVTTPAETAQVGTISANGESEIGQMISEAMQKVGSEGVITVEEAKHFQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_SYNS3 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9311) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47
Identity = 93/180 (51.67%), Postives = 139/180 (77.22%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK ++F   SR +++ G++ L+DAV +T+GPRGRNVVL++ +GSP +VNDG TIA+ IELADP EN GA LI++VASKT D AGDGTTTA+VLA+ +++ GL +  +GA+P+ L+RG++K V  +V  L +R++ + G D I+ VAT+S+G D+ +G M+A+A+D+V  DGV+++E S S
Sbjct:    2 AKLLSFSNESRESLERGMNALADAVRVTIGPRGRNVVLEKSYGSPDIVNDGDTIAKEIELADPFENIGAKLIQQVASKTKDKAGDGTTTATVLAQAMVEEGLRNTAAGASPIELRRGMEKAVAAVVASLNQRSQSVSG-DAIRQVATVSSGGDEEVGRMVAEAMDRVSFDGVITVEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_RENSM (60 kDa chaperonin 1 OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groL1 PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 4.697e-47
Identity = 95/181 (52.49%), Postives = 141/181 (77.90%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK IAFD+ +R  ++ G++ L+DAV +TLGPRGRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT++ AGDGTTTA+VLA+ +++ GL +V +GA+P+SLKRGI+K V  + E+L   A+ +E +++I A A+ISA  D  IG +IA+A+DKVG +GV+++E S++F
Sbjct:    2 AKIIAFDEEARRGLERGLNILADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDEVAGDGTTTATVLAQALVREGLRNVAAGADPLSLKRGIEKAVAAVTEQLLASAKEVETKEEIAATASISAA-DTQIGALIAEALDKVGKEGVITVEESNTF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ZYMMO (60 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 91/183 (49.73%), Postives = 134/183 (73.22%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F + +R  +  G+D L+DAV +TLGP+GRNVVLD+ FG+P++  DGV++A+ IEL D  EN GA ++REVASKTND AGDGTTTA+VLA+ I++ G+ SV +G NP+ LKRGID     +VE L  R++P+   +++  V  ISA  D+ +G  IA+A++KVG +GV+++E +  F+
Sbjct:    2 AAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVLDKAFGAPRITKDGVSVAKEIELKDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGIDLAATKVVESLRSRSKPVSDFNEVAQVGIISANGDEEVGRRIAEAMEKVGKEGVITVEEAKGFD 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_STRA3 (60 kDa chaperonin OS=Streptococcus agalactiae serotype III GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 97/182 (53.30%), Postives = 134/182 (73.63%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F   +R+AM  G+D L+D V +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I++ GL +VT+GANP+ ++RGI+  V   VEEL++ A+P+ G++ I  VA +S+   + +G  I++A+ +VG DGV++IE S   E
Sbjct:    2 AKDIKFSADARSAMVRGVDILADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIETAVSAAVEELKEIAQPVSGKEAIAQVAAVSS-RSEKVGEYISEAMGRVGNDGVITIEESRGME 182          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_ELUMP4.697e-4752.7860 kDa chaperonin OS=Elusimicrobium minutum (strai... [more]
CH60_DIAST4.697e-4752.4660 kDa chaperonin OS=Diaphorobacter sp. (strain TP... [more]
CH60_BUCBP4.697e-4751.9160 kDa chaperonin OS=Buchnera aphidicola subsp. Ba... [more]
CH60_BAUCH4.697e-4751.9160 kDa chaperonin OS=Baumannia cicadellinicola sub... [more]
CH60_ACISJ4.697e-4752.4660 kDa chaperonin OS=Acidovorax sp. (strain JS42) ... [more]
CH60_ACEP34.697e-4751.9160 kDa chaperonin OS=Acetobacter pasteurianus (str... [more]
CH601_SYNS34.697e-4751.6760 kDa chaperonin 1 OS=Synechococcus sp. (strain C... [more]
CH601_RENSM4.697e-4752.4960 kDa chaperonin 1 OS=Renibacterium salmoninarum ... [more]
CH60_ZYMMO6.134e-4749.7360 kDa chaperonin OS=Zymomonas mobilis GN=groL PE=... [more]
CH60_STRA36.134e-4753.3060 kDa chaperonin OS=Streptococcus agalactiae sero... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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