CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SALDC (60 kDa chaperonin OS=Salmonella dublin (strain CT_02021853) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SALCH (60 kDa chaperonin OS=Salmonella choleraesuis GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SALA4 (60 kDa chaperonin OS=Salmonella agona (strain SL483) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_POLSJ (60 kDa chaperonin OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 95/183 (51.91%), Postives = 135/183 (73.77%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +RA M  G++ L++AV +TLGP+GRNVVL+  FG+P V  DGV++A+ IEL D ++N GA +++EVASKT+D AGDGTTTA+VLA+ I++ G+  V +G NP+ LKRGIDK V  LVEEL+K ++      +I  V +ISA +D+ IG +IADA+DKVG +GV+++E   S E
Sbjct:    2 AAKDVIFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDIAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVTALVEELKKASKATTTSKEIAQVGSISANSDEAIGKIIADAMDKVGKEGVITVEDGKSLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PHOLL (60 kDa chaperonin OS=Photorhabdus luminescens subsp. laumondii GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V   V EL+K + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  E
Sbjct:    2 AAKDVKFGSDARVKMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPAITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGIDKAVVAAVAELKKLSVPCSDSISIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEEGTGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PELPD (60 kDa chaperonin OS=Pelobacter propionicus (strain DSM 2379) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 96/183 (52.46%), Postives = 133/183 (72.68%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK I FDQ  R A+  G++ L+D V +TLGP+GRNVV+D+ FG+P +  DGVT+A+ IEL D  EN GA L++EVASKT+D AGDGTTTA+VLA+ I + G   V +G NP+ +KRGIDK V  +V EL+K ++PI    +I  V TISA ND  IG +IA+A++KVG +GV+++E + S +
Sbjct:    2 AAKIIKFDQEGRNAILKGVNILADTVKVTLGPKGRNVVIDKSFGAPLITKDGVTVAKEIELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGSKLVAAGHNPMEIKRGIDKAVETIVAELQKISKPIVDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEAKSMD 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NITEU (60 kDa chaperonin OS=Nitrosomonas europaea GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 93/183 (50.82%), Postives = 136/183 (74.32%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK++ F   +R A+ +G++ L+DAV +TLGP+GRNVVL+  +G+P +  DGV++A+ IEL D  EN GA +++EVASKT+D+AGDGTTTA+VLA+ I+K G+  V +G NP+ LKRGI+K V G VEEL+K ++P     +I  V +ISA +D  IG +IA+A+DKVG +GV+++E  S  E
Sbjct:    2 AAKEVRFGDSARQAVISGVNVLADAVKVTLGPKGRNVVLERSYGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDTAGDGTTTATVLAQSIVKEGMRYVAAGMNPMDLKRGIEKAVTGAVEELKKLSKPCSTSKEIAQVGSISANSDTEIGRIIAEAMDKVGKEGVITVEDGSGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_KLEPL (60 kDa chaperonin (Fragment) OS=Klebsiella planticola GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKTLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_GEOSF (60 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 96/182 (52.75%), Postives = 132/182 (72.53%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK I FDQ  R A   G++ L+DAV +TLGP+GRNVV+++ FG+P +  DGVT+A+ IEL D  EN GA L++EVASKT+D AGDGTTTA+VLA+ I + G   V +G NP+ +KRGIDK V  LV EL+  ++PI+   +I  V TISA ND  IG +IA+A++KVG +GV+++E + + E
Sbjct:    2 AKVIKFDQEGRNAFLKGVNTLADAVKVTLGPKGRNVVIEKSFGAPLITKDGVTVAKEIELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAKLVAAGHNPMEIKRGIDKAVETLVAELKSISKPIKDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEAKAME 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_GEOMG (60 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 95/182 (52.20%), Postives = 133/182 (73.08%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK I FDQ  R A+  G++ L+DAV +TLGP+GRNV++++ FGSP +  DGVT+A+ IEL D  EN GA L++EVASKT+D AGDGTTTA+VLA+ I + G   V +G NP+ +KRGID  V  +V EL+K ++PI+   +I  V TISA ND  IG +IA+A++KVG +GV+++E + + E
Sbjct:    2 AKIIKFDQEGRNAILKGVNTLADAVKVTLGPKGRNVIIEKSFGSPLITKDGVTVAKEIELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGSKLVAAGHNPMEIKRGIDSAVETIVAELQKISKPIKDHKEIAQVGTISANNDKTIGGIIAEAMEKVGKEGVITVEEAKAME 183          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_SALDC6.134e-4751.9160 kDa chaperonin OS=Salmonella dublin (strain CT_... [more]
CH60_SALCH6.134e-4751.9160 kDa chaperonin OS=Salmonella choleraesuis GN=gr... [more]
CH60_SALA46.134e-4751.9160 kDa chaperonin OS=Salmonella agona (strain SL48... [more]
CH60_POLSJ6.134e-4751.9160 kDa chaperonin OS=Polaromonas sp. (strain JS666... [more]
CH60_PHOLL6.134e-4751.9160 kDa chaperonin OS=Photorhabdus luminescens subs... [more]
CH60_PELPD6.134e-4752.4660 kDa chaperonin OS=Pelobacter propionicus (strai... [more]
CH60_NITEU6.134e-4750.8260 kDa chaperonin OS=Nitrosomonas europaea GN=groL... [more]
CH60_KLEPL6.134e-4751.9160 kDa chaperonin (Fragment) OS=Klebsiella plantic... [more]
CH60_GEOSF6.134e-4752.7560 kDa chaperonin OS=Geobacter sp. (strain FRC-32)... [more]
CH60_GEOMG6.134e-4752.2060 kDa chaperonin OS=Geobacter metallireducens (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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