CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ENTGE (60 kDa chaperonin (Fragment) OS=Enterobacter gergoviae GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_EDWI9 (60 kDa chaperonin OS=Edwardsiella ictaluri (strain 93-146) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 95/183 (51.91%), Postives = 130/183 (71.04%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FGSP +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA  DD +G +IA+A++KVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGSPAITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVSAAVEELKALSVPCSDSKAIAQVGTISANADDTVGQLIAEAMEKVGKEGVITVEEGTGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CITK8 (60 kDa chaperonin OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKTLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BORT9 (60 kDa chaperonin OS=Borrelia turicatae (strain 91E135) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 96/182 (52.75%), Postives = 138/182 (75.82%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F++ +R ++ +GI+KLS+AV +TLGP+GRNV++D+ FGSP V  DGV++AR IEL + +EN GA L++EVA KTND AGDGTTTA+VLA  I + GL +V+SG NP+ +K+GI+  V    E++ K A+ I  +++I  VA+ISA ND  IG  IA+A+D+VG DGV+++E S +F+
Sbjct:    2 AKDIYFNEDARKSLLSGIEKLSNAVKVTLGPKGRNVLIDKKFGSPTVTKDGVSVAREIELDNALENMGAQLLKEVAIKTNDLAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIEHAVTLASEKIRKSAKKITTKEEIAQVASISANNDTSIGEKIAEAMDRVGKDGVITVEESKTFD 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BORRA (60 kDa chaperonin OS=Borrelia recurrentis (strain A1) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 96/182 (52.75%), Postives = 137/182 (75.27%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F++ +R ++ +GI+KLS+AV +TLGP+GRNV++D+ FGSP V  DGV++AR I+L +  EN GA L++EVA KTND AGDGTTTA+VLA  I + GL +V+SG NP+ +K+GID  V    E++ K A+ I  +++I  VA+ISA ND  IG  IA+A+D+VG DGV+++E S +F+
Sbjct:    2 AKDIYFNEDARKSLLSGIEKLSNAVKVTLGPKGRNVLIDKKFGSPIVTKDGVSVAREIDLENSFENMGAQLLKEVAIKTNDLAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVALAAEKIRKSAKKITTKEEIAQVASISANNDTSIGEKIAEAMDRVGKDGVITVEESKTFD 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BORDL (60 kDa chaperonin OS=Borrelia duttonii (strain Ly) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 96/182 (52.75%), Postives = 137/182 (75.27%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F++ +R ++ +GI+KLS+AV +TLGP+GRNV++D+ FGSP V  DGV++AR I+L +  EN GA L++EVA KTND AGDGTTTA+VLA  I + GL +V+SG NP+ +K+GID  V    E++ K A+ I  +++I  VA+ISA ND  IG  IA+A+D+VG DGV+++E S +F+
Sbjct:    2 AKDIYFNEDARKSLLSGIEKLSNAVKVTLGPKGRNVLIDKKFGSPIVTKDGVSVAREIDLENSFENMGAQLLKEVAIKTNDLAGDGTTTATVLAYAIAREGLKNVSSGINPIGIKKGIDHAVALAAEKIRKSAKKITTKEEIAQVASISANNDTSIGEKIAEAMDRVGKDGVITVEESKTFD 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_ARTS2 (60 kDa chaperonin 2 OS=Arthrobacter sp. (strain FB24) GN=groL2 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 99/180 (55.00%), Postives = 136/180 (75.56%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK +AF+  +R +++AGIDKL++ V +TLGPRGRNVVLD+ +G+P + NDGVTIAR +EL DP EN GA L +EVA+KTND AGDGTTTA+VLA+ ++K GL +V +GA P  +KRGI+ +V  +   L + ARP+EG   +  VA ISA +D+ IG ++A+A  KVG DGV++IE SS+
Sbjct:    2 AKQLAFNDAARRSLEAGIDKLANTVKVTLGPRGRNVVLDKKWGAPTITNDGVTIAREVELDDPFENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVKEGLRNVAAGAAPGQIKRGIEVSVEAVAARLLENARPVEG-SQVANVAAISAQSDE-IGELLAEAFGKVGKDGVITIEESST 179          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_NITWN (60 kDa chaperonin 1 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 94/183 (51.37%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK++ F   +R  M  G+D L++AV +TLGP+GRNVV+++ FG+P++  DGVT+A+ IEL D  EN GA ++REVASKTND AGDGTTTA+VLA+ I+K G  +V +G NP+ LKRGID  V  +V++L K A+ I    +I  VATISA  D  IG  +A+A+ KVG +GV+++E + S E
Sbjct:    2 AAKEVRFSSDAREKMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELDDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVKEGAKAVAAGMNPMDLKRGIDLAVEAVVKDLTKNAKKITSNSEIAQVATISANGDTEIGRFLAEAMQKVGNEGVITVEEAKSLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_MYCUA (60 kDa chaperonin 1 OS=Mycobacterium ulcerans (strain Agy99) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.134e-47
Identity = 97/180 (53.89%), Postives = 131/180 (72.78%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            +K I +D+ +R AM+AG+DKL++ V +TLGPRGR+VVL + FG P V NDGVT+AR I+L DP EN GA L++ VA+KTND AGDGTTTA+VLAR ++K GL  V +G NP++L  GI K    + E L   A P+ G+D I  VAT+S+  D LIG ++ +A+ KVG DGV+S+E SS+
Sbjct:    2 SKLIEYDETARRAMEAGVDKLAETVRVTLGPRGRHVVLAKSFGGPTVTNDGVTVARDIDLEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLARALVKTGLRLVAAGINPIALGSGIGKAADAVSEALLASATPVSGKDAIAQVATVSS-RDQLIGDLVGEAMSKVGHDGVVSVEESST 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SHISS (60 kDa chaperonin OS=Shigella sonnei (strain Ss046) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_ENTGE6.134e-4751.9160 kDa chaperonin (Fragment) OS=Enterobacter gergo... [more]
CH60_EDWI96.134e-4751.9160 kDa chaperonin OS=Edwardsiella ictaluri (strain... [more]
CH60_CITK86.134e-4751.9160 kDa chaperonin OS=Citrobacter koseri (strain AT... [more]
CH60_BORT96.134e-4752.7560 kDa chaperonin OS=Borrelia turicatae (strain 91... [more]
CH60_BORRA6.134e-4752.7560 kDa chaperonin OS=Borrelia recurrentis (strain ... [more]
CH60_BORDL6.134e-4752.7560 kDa chaperonin OS=Borrelia duttonii (strain Ly)... [more]
CH602_ARTS26.134e-4755.0060 kDa chaperonin 2 OS=Arthrobacter sp. (strain FB... [more]
CH601_NITWN6.134e-4751.3760 kDa chaperonin 1 OS=Nitrobacter winogradskyi (s... [more]
CH601_MYCUA6.134e-4753.8960 kDa chaperonin 1 OS=Mycobacterium ulcerans (str... [more]
CH60_SHISS8.012e-4751.9160 kDa chaperonin OS=Shigella sonnei (strain Ss046... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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