CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HELPH (60 kDa chaperonin OS=Helicobacter pylori (strain HPAG1) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 90/182 (49.45%), Postives = 135/182 (74.18%), Query Frame = 1 
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I F   +R  +  G+ +L DAV +T+GPRGRNV++ + +G+P +  DGV++A+ IEL+ P+ N GA L++EVASKT D+AGDGTTTA+VLA  I K GL ++T+GANP+ +KRG+DK    ++ EL+K ++ + G+++I  VATISA +D  IG +IADA++KVG DGV+++E +   E
Sbjct:    2 AKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIELSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAKGIE 183
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HELPG (60 kDa chaperonin OS=Helicobacter pylori (strain G27) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 90/182 (49.45%), Postives = 135/182 (74.18%), Query Frame = 1 
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I F   +R  +  G+ +L DAV +T+GPRGRNV++ + +G+P +  DGV++A+ IEL+ P+ N GA L++EVASKT D+AGDGTTTA+VLA  I K GL ++T+GANP+ +KRG+DK    ++ EL+K ++ + G+++I  VATISA +D  IG +IADA++KVG DGV+++E +   E
Sbjct:    2 AKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIELSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAKGIE 183
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HELP2 (60 kDa chaperonin OS=Helicobacter pylori (strain P12) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 90/182 (49.45%), Postives = 135/182 (74.18%), Query Frame = 1 
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I F   +R  +  G+ +L DAV +T+GPRGRNV++ + +G+P +  DGV++A+ IEL+ P+ N GA L++EVASKT D+AGDGTTTA+VLA  I K GL ++T+GANP+ +KRG+DK    ++ EL+K ++ + G+++I  VATISA +D  IG +IADA++KVG DGV+++E +   E
Sbjct:    2 AKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIELSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAKGIE 183
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_GEOUR (60 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 96/182 (52.75%), Postives = 132/182 (72.53%), Query Frame = 1 
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK I FDQ  R A   G++ L+DAV +TLGP+GRNVV+++ FG+P +  DGVT+A+ IEL D  EN GA L++EVASKT+D AGDGTTTA+VLA+ I + G   V +G NP+ +KRGIDK V  LV EL+  ++PI+   +I  V TISA ND  IG +IA+A++KVG +GV+++E + + E
Sbjct:    2 AKIIKFDQEGRNAFLKGVNTLADAVKVTLGPKGRNVVIEKSFGAPLITKDGVTVAKEIELDDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAKLVAAGHNPMEIKRGIDKAVETLVAELKNISKPIKDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEAKAME 183
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ESCF3 (60 kDa chaperonin OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDTAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ECOUT (60 kDa chaperonin OS=Escherichia coli (strain UTI89 / UPEC) GN=groL PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ECOSM (60 kDa chaperonin OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ECOSE (60 kDa chaperonin OS=Escherichia coli (strain SE11) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ECOLU (60 kDa chaperonin OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ECOLI (60 kDa chaperonin OS=Escherichia coli (strain K12) GN=groL PE=1 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_HELPH8.012e-4749.4560 kDa chaperonin OS=Helicobacter pylori (strain H... [more]
CH60_HELPG8.012e-4749.4560 kDa chaperonin OS=Helicobacter pylori (strain G... [more]
CH60_HELP28.012e-4749.4560 kDa chaperonin OS=Helicobacter pylori (strain P... [more]
CH60_GEOUR8.012e-4752.7560 kDa chaperonin OS=Geobacter uraniireducens (str... [more]
CH60_ESCF38.012e-4751.9160 kDa chaperonin OS=Escherichia fergusonii (strai... [more]
CH60_ECOUT8.012e-4751.9160 kDa chaperonin OS=Escherichia coli (strain UTI8... [more]
CH60_ECOSM8.012e-4751.9160 kDa chaperonin OS=Escherichia coli (strain SMS-... [more]
CH60_ECOSE8.012e-4751.9160 kDa chaperonin OS=Escherichia coli (strain SE11... [more]
CH60_ECOLU8.012e-4751.9160 kDa chaperonin OS=Escherichia coli O17:K52:H18 ... [more]
CH60_ECOLI8.012e-4751.9160 kDa chaperonin OS=Escherichia coli (strain K12)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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