CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_SPHAL (60 kDa chaperonin 1 OS=Sphingopyxis alaskensis GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 92/183 (50.27%), Postives = 133/183 (72.68%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F + +R  +  G+D L+DAV +TLGP+GRNVV+D+ FG+P++  DGV++A+ IEL D  EN GA ++REVASK ND AGDGTTTA+VLA+ I++ G+ SV +G NP+ LKRGID  V  +VE+L+ R+ P+ G  +I  V  ISA  D  +G  IA+A++KVG +GV+++E +   E
Sbjct:    2 AAKDVKFSRDARERILKGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELKDKFENMGAQMLREVASKANDKAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGIDLAVTKVVEDLKARSTPVSGSSEIAQVGIISANGDVEVGEKIAEAMEKVGKEGVITVEEAKGLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_RHOSH (60 kDa chaperonin 1 OS=Rhodobacter sphaeroides GN=groL1 PE=1 SV=4)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 93/183 (50.82%), Postives = 132/183 (72.13%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ FD  +R  M  G++ L+DAV +TLGP+GRNVV+D+ FG+P++  DGV++A+ IEL+D  EN GA +++EVAS+TND AGDGTTTA+VLA+ IIK GL +V +G NP+ LKRGID     +VE ++  ARP+    ++  V TISA  +  IG  IADA+ KVG +GV+++E +   E
Sbjct:    2 AAKDVKFDTDARDRMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKAVAAGMNPMDLKRGIDLATSKVVEAIKAAARPVNDSHEVAQVGTISANGEAQIGRFIADAMQKVGNEGVITVEENKGLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_RHOS4 (60 kDa chaperonin 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 93/183 (50.82%), Postives = 132/183 (72.13%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ FD  +R  M  G++ L+DAV +TLGP+GRNVV+D+ FG+P++  DGV++A+ IEL+D  EN GA +++EVAS+TND AGDGTTTA+VLA+ IIK GL +V +G NP+ LKRGID     +VE ++  ARP+    ++  V TISA  +  IG  IADA+ KVG +GV+++E +   E
Sbjct:    2 AAKDVKFDTDARDRMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKAVAAGMNPMDLKRGIDLATSKVVEAIKAAARPVNDSHEVAQVGTISANGEAQIGRFIADAMQKVGNEGVITVEENKGLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_ERYLH (60 kDa chaperonin 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 91/183 (49.73%), Postives = 133/183 (72.68%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK++ F   +R  M  G+D L++AV +TLGP+GRNVV+++ FG+P++  DGVT+A+ IEL D  EN GA ++REVASK ND AGDGTTTA+VLA+ I++ G  +V +G NP+ LKRGID  V  +V++LE  A+ +    +I  VATISA  D+ +G  +A+A+DKVG +GV+++E + S E
Sbjct:    2 AAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELKDKFENMGAQMLREVASKQNDKAGDGTTTATVLAQAIVREGAKAVAAGMNPIDLKRGIDLAVGTVVKDLESHAKKVSANSEIAQVATISANGDETVGRFLAEAMDKVGNEGVITVEEAKSLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_ECOK1 (60 kDa chaperonin 1 OS=Escherichia coli O1:K1 / APEC GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 8.012e-47
Identity = 95/183 (51.91%), Postives = 131/183 (71.58%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   VEEL+  + P      I  V TISA +D+ +G +IA+A+DKVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQ 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_VEREI (60 kDa chaperonin OS=Verminephrobacter eiseniae (strain EF01-2) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 94/183 (51.37%), Postives = 134/183 (73.22%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK++ F   +RA M  G++ L++AV +TLGP+GRNVV++  FG+P V  DGV++A+ IEL D ++N GA L++EVASKT+D+AGDGTTTA+VLA+ I++ G   V +G NP+ LKRGIDK V  LV EL+K ++P     +I  V +ISA  D+ IG +IADA+DKVG +GV+++E   S E
Sbjct:    2 AAKEVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVIERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGINPMDLKRGIDKAVTALVAELKKASKPTTTSKEIAQVGSISANADETIGKLIADAMDKVGKEGVITVEDGKSLE 184
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_STRTD (60 kDa chaperonin OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 97/182 (53.30%), Postives = 133/182 (73.08%), Query Frame = 1 
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F   +RAAM  G+D L+D V +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I++ GL +VT+GANP+ ++RGI+  V   VEEL+  A+P+  ++ I  VA +S+   + +G  I++A+++VG DGV++IE S   E
Sbjct:    2 AKDIKFSSDARAAMVRGVDTLADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIEAAVAAAVEELKVIAQPVANKEAIAQVAAVSS-RSEKVGEYISEAMERVGNDGVITIEESRGME 182
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_STRT2 (60 kDa chaperonin OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 97/182 (53.30%), Postives = 133/182 (73.08%), Query Frame = 1 
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F   +RAAM  G+D L+D V +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I++ GL +VT+GANP+ ++RGI+  V   VEEL+  A+P+  ++ I  VA +S+   + +G  I++A+++VG DGV++IE S   E
Sbjct:    2 AKDIKFSSDARAAMVRGVDTLADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIEAAVAAAVEELKVIAQPVANKEAIAQVAAVSS-RSEKVGEYISEAMERVGNDGVITIEESRGME 182
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_STRT1 (60 kDa chaperonin OS=Streptococcus thermophilus (strain CNRZ 1066) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 97/182 (53.30%), Postives = 133/182 (73.08%), Query Frame = 1 
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AKDI F   +RAAM  G+D L+D V +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I++ GL +VT+GANP+ ++RGI+  V   VEEL+  A+P+  ++ I  VA +S+   + +G  I++A+++VG DGV++IE S   E
Sbjct:    2 AKDIKFSSDARAAMVRGVDTLADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIEAAVAAAVEELKVIAQPVANKEAIAQVAAVSS-RSEKVGEYISEAMERVGNDGVITIEESRGME 182
[Close]
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SERRU (60 kDa chaperonin (Fragment) OS=Serratia rubidaea GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 94/183 (51.37%), Postives = 132/183 (72.13%), Query Frame = 1 
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V   VEEL+K + P      I  V TISA +D+ +G +IA+A++KVG +GV+++E  +  +
Sbjct:    2 AAKDVKFGNDARVKMLNGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEGTGLQ 184
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_SPHAL8.012e-4750.2760 kDa chaperonin 1 OS=Sphingopyxis alaskensis GN=... [more]
CH601_RHOSH8.012e-4750.8260 kDa chaperonin 1 OS=Rhodobacter sphaeroides GN=... [more]
CH601_RHOS48.012e-4750.8260 kDa chaperonin 1 OS=Rhodobacter sphaeroides (st... [more]
CH601_ERYLH8.012e-4749.7360 kDa chaperonin 1 OS=Erythrobacter litoralis (st... [more]
CH601_ECOK18.012e-4751.9160 kDa chaperonin 1 OS=Escherichia coli O1:K1 / AP... [more]
CH60_VEREI1.046e-4651.3760 kDa chaperonin OS=Verminephrobacter eiseniae (s... [more]
CH60_STRTD1.046e-4653.3060 kDa chaperonin OS=Streptococcus thermophilus (s... [more]
CH60_STRT21.046e-4653.3060 kDa chaperonin OS=Streptococcus thermophilus (s... [more]
CH60_STRT11.046e-4653.3060 kDa chaperonin OS=Streptococcus thermophilus (s... [more]
CH60_SERRU1.046e-4651.3760 kDa chaperonin (Fragment) OS=Serratia rubidaea ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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