CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_RHOS5 (60 kDa chaperonin OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 92/183 (50.27%), Postives = 133/183 (72.68%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ FD  +R  M  G++ L+DAV +TLGP+GRNVV+D+ FG+P++  DGV++A+ IEL+D  EN GA +++EVAS+TND AGDGTTTA+VLA+ IIK GL +V +G NP+ LKRGID     +VE ++  +RP+  + ++  V TISA  +  IG  IADA+ KVG +GV+++E +   E
Sbjct:    2 AAKDVKFDTDARDRMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKAVAAGMNPMDLKRGIDLATAKVVESIKAASRPVNDQHEVAQVGTISANGEAQIGRFIADAMQKVGNEGVITVEENKGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_RHOPA (60 kDa chaperonin OS=Rhodopseudomonas palustris GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 92/183 (50.27%), Postives = 133/183 (72.68%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ FD  +R  M  G++ L+DAV +TLGP+GRNVV+D+ FG+P++  DGV++A+ IEL+D  EN GA +++EVAS+TND AGDGTTTA+VLA+ IIK GL +V +G NP+ LKRGID     +VE ++  +RP+  + ++  V TISA  +  IG  IADA+ KVG +GV+++E +   E
Sbjct:    2 AAKDVKFDTDARDRMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLKAVAAGMNPMDLKRGIDLATAKVVESIKAASRPVNDQHEVAQVGTISANGEAQIGRFIADAMQKVGNEGVITVEENKGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_NEIFL (60 kDa chaperonin OS=Neisseria flavescens GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 94/183 (51.37%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ F    R  M  G++ L++AV +TLGP+GRNVVLD  FG P +  DGV++A+ IEL D  EN GA +++EVASKTND AGDGTTTA+VLA+ I+  G+  VT+G NP  LKRGIDK V  LV+EL+  A+P +   +I  V +ISA +D+ +G +IA+A++KVG +GV+++E   S E
Sbjct:    2 AAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVLDRAFGGPHITKDGVSVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAEGMKYVTAGMNPTDLKRGIDKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGAIIAEAMEKVGKEGVITVEDGKSLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LACSS (60 kDa chaperonin OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 94/182 (51.65%), Postives = 137/182 (75.27%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK++ F + +R+ M AG+D+L++ V  TLGP+GRNVVL++ +GSP++ NDGVTIA+AIEL D  EN GA L+ EVASKTND AGDGTTTA+VLA+ II+ G+ +VT+GANPV ++RGI+      V++L + +  +E +D I  VA +S+ N++  G +IADA++KVG DGV+++E S   +
Sbjct:    2 AKELKFSEDARSKMLAGVDQLANTVKTTLGPKGRNVVLEKAYGSPEITNDGVTIAKAIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLAQAIIREGMKNVTAGANPVGIRRGIELATREAVKKLHEISHKVESKDAIAQVAAVSSANEE-TGRLIADAMEKVGNDGVITVEESKGID 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_LACH4 (60 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 92/178 (51.69%), Postives = 132/178 (74.16%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AKDI F + +R ++  G+DKL+D V  T+GP+GRNVVL++ +G+P + NDGVTIA++IEL D  EN GA L+ E A KTND AGDGTTTA+VL + I++ G+ +VT+GANPV ++RGI+K     V+EL K +  +E +D I  VA +S+ + + +G +IADA++KVG DGV++IE S
Sbjct:    2 AKDIKFSENARRSLLKGVDKLADTVKTTIGPKGRNVVLEQSYGNPDITNDGVTIAKSIELKDRYENMGAKLVAEAAQKTNDIAGDGTTTATVLTQAIVREGMKNVTAGANPVGIRRGIEKATKAAVDELHKISHKVESKDQIANVAAVSSASKE-VGALIADAMEKVGHDGVITIEDS 178          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_HAEDU (60 kDa chaperonin OS=Haemophilus ducreyi GN=groL PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 92/181 (50.83%), Postives = 132/181 (72.93%), Query Frame = 1
Query:  199 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            KD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ +G+P +  DGV++AR IEL D  EN GA +++EVASK ND AGDGTTTA+VLA+ I+  GL +V +G NP+ LKRGIDK V  +VEEL+  ++P E   +I+ V TISA +D+ +G +IA A++KVG +GV+++E  +  +
Sbjct:    4 KDVKFGNDARVKMLKGVNILADAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDVAGDGTTTATVLAQSIVSEGLRAVAAGMNPMDLKRGIDKAVAAVVEELKAISKPCETSKEIEQVGTISANSDETVGKLIAQAMEKVGKEGVITVEDGTGLD 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_DINSH (60 kDa chaperonin OS=Dinoroseobacter shibae (strain DFL 12) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 93/183 (50.82%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKD+ FD  +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P++  DGV++A+ IEL D  EN GA +++EVAS+TND AGDGTTTA+VLA+ I+K G+ SV +G NP+ LKRGID     +VE ++  ARP+    ++  V TISA  +  IG  IADA+ KVG +GV+++E +   E
Sbjct:    2 AAKDVKFDIDARNRMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGMKSVAAGMNPMDLKRGIDLATSKVVEAIKSAARPVNDSAEVAQVGTISANGESEIGQQIADAMQKVGNEGVITVEENKGLE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_DELAS (60 kDa chaperonin OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 94/181 (51.93%), Postives = 135/181 (74.59%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            +AKD+ F   +RA M  G++ L++AV +TLGP+GRNVVL+  FG+P V  DGV++A+ IEL D ++N GA L++EVASKTND AGDGTTTA+VLA+ I++ G   V +G NP+ LKRGIDK V  LVEEL+K+++      +I  V +ISA +D+ +G++IA+A+DKVG +GV+++E   S
Sbjct:    2 AAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQLVKEVASKTNDIAGDGTTTATVLAQAIVREGAKYVAAGLNPMDLKRGIDKAVAALVEELKKQSKATTTSKEIAQVGSISANSDESVGSIIAEAMDKVGKEGVITVEEGKS 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BACFO (60 kDa chaperonin OS=Bacteroides forsythus GN=groL PE=1 SV=3)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 96/183 (52.46%), Postives = 137/183 (74.86%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPI-EGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK+I FD  +R  ++ G+D+L++AV +TLGP+GRNV+L++ FG+P++  DGVT+A+ IELA P EN GA L++EVASKTND AGDGTTTA+VLA+ II +GL +VT+GANP+ LKRGIDK V  +VE +  ++  +    D I+ VA ISA  D+ IG +IA+A+ KV  +GV+++E +   E
Sbjct:    2 AKEIKFDMNARDLLKKGVDELANAVKVTLGPKGRNVILEKKFGAPQITKDGVTVAKEIELACPYENMGAQLVKEVASKTNDKAGDGTTTATVLAQAIIGVGLKNVTAGANPMDLKRGIDKAVSKVVESIASQSEAVGTNMDRIEHVAKISANGDEGIGKLIAEAMQKVKKEGVITVEEAKGTE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_RHILE (60 kDa chaperonin 2 OS=Rhizobium leguminosarum GN=groL2 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.046e-46
Identity = 96/183 (52.46%), Postives = 131/183 (71.58%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK+I F   +R  M  G+D L++AV  TLGP+GRNVV+D+ FG+P++  DGV++A+ IEL D  EN GA ++REVASKT+D AGDGTTTA+VLA+ I+K G  +VTSG NP+ LKRGID  V  +V EL+  AR I    +I  V TISA  D  IG  +A+A++KVG DGV+++E + + E
Sbjct:    2 AAKEIKFSTEAREKMLRGVDILANAVKATLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAQAIVKEGAKAVTSGMNPMDLKRGIDLAVAAIVAELKANARKISNNSEIAQVGTISANGDAEIGRFLAEAMEKVGNDGVITVEEAKTAE 184          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_RHOS51.046e-4650.2760 kDa chaperonin OS=Rhodobacter sphaeroides (stra... [more]
CH60_RHOPA1.046e-4650.2760 kDa chaperonin OS=Rhodopseudomonas palustris GN... [more]
CH60_NEIFL1.046e-4651.3760 kDa chaperonin OS=Neisseria flavescens GN=groL ... [more]
CH60_LACSS1.046e-4651.6560 kDa chaperonin OS=Lactobacillus sakei subsp. sa... [more]
CH60_LACH41.046e-4651.6960 kDa chaperonin OS=Lactobacillus helveticus (str... [more]
CH60_HAEDU1.046e-4650.8360 kDa chaperonin OS=Haemophilus ducreyi GN=groL P... [more]
CH60_DINSH1.046e-4650.8260 kDa chaperonin OS=Dinoroseobacter shibae (strai... [more]
CH60_DELAS1.046e-4651.9360 kDa chaperonin OS=Delftia acidovorans (strain D... [more]
CH60_BACFO1.046e-4652.4660 kDa chaperonin OS=Bacteroides forsythus GN=groL... [more]
CH602_RHILE1.046e-4652.4660 kDa chaperonin 2 OS=Rhizobium leguminosarum GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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