CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_AMOA5 (60 kDa chaperonin OS=Amoebophilus asiaticus (strain 5a2) GN=groL PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.080e-51
Identity = 98/182 (53.85%), Postives = 138/182 (75.82%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK I FD  +RA +++G+D +++AV +TLGP+GRNVV+D+ +G+P +  DG+++A+ IEL DP+EN GA LI+EVASKT D AGDGTTTA+VLA+ I   G+ +V +GANP+ LKRG+DK +  +VE L++ +R I    +I+ VATISA ND  IG MIADA+DKVG DGV+++E +   E
Sbjct:    2 AKHIIFDSEARAKLKSGVDTMANAVKVTLGPKGRNVVIDKKYGAPSITKDGISVAKEIELKDPVENLGAQLIKEVASKTADGAGDGTTTATVLAQSIFSAGIKNVAAGANPMDLKRGVDKAIEAVVERLKQNSRKISNSKEIEQVATISANNDSKIGKMIADAMDKVGKDGVITVEEAKGTE 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_PROMA (60 kDa chaperonin 2 OS=Prochlorococcus marinus GN=groL2 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.080e-51
Identity = 99/182 (54.40%), Postives = 144/182 (79.12%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK I +++++R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GAN ++LK+GIDK    LV++++++A+PI   + I    TI+AGND+ +G MIADA+DKVG +GV+S+E   S E
Sbjct:    2 AKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGIDKATDFLVKKIQEQAKPISDSNAIAQCGTIAAGNDEEVGQMIADAMDKVGKEGVISLEEGKSME 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_SYNS9 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9902) GN=groL1 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.411e-51
Identity = 102/182 (56.04%), Postives = 141/182 (77.47%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK I +++ +R A++ GID L+++V +TLGP+GRNVVL++ FGSP+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GAN ++LK+GIDK    LV +++  A+PI   + I  V TISAGND+ +G MIADA+DKVG +GV+S+E   S E
Sbjct:    2 AKRIIYNENARRALEKGIDILAESVAVTLGPKGRNVVLEKKFGSPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGIDKASDFLVGKIKDMAKPIADSNAIAQVGTISAGNDEEVGKMIADAMDKVGKEGVISLEEGKSME 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SYNR3 (60 kDa chaperonin OS=Synechococcus sp. (strain RCC307) GN=groL PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.843e-51
Identity = 100/180 (55.56%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +++++R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G +LIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GAN +SLKRGID+    LV ++E+ A+PI   + I  V  ISAGNDD +G MIADA++KVG +GV+S+E   S
Sbjct:    2 AKRIIYNEQARRALEKGIDILTESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVSLIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAISLKRGIDQAAVFLVSKIEENAKPITDNNSIAQVGAISAGNDDEVGKMIADAMEKVGKEGVISLEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_DICTD (60 kDa chaperonin OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=groL PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.843e-51
Identity = 100/179 (55.87%), Postives = 140/179 (78.21%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            +AK ++ D ++R A+  G+D ++D V +TLGP+GRNVVL++ FG+P + NDGVTIA+ I+L DP EN GA L++EVASKTND AGDGTTTA+VLA+ ++  G+  V +GANP+ +KRGI+K V  +VEEL+K A+P+E + DI  VA ISA ND+ IG +IA+A+DKVG DGV+++E S
Sbjct:    2 AAKLVSLDMQARTALIKGLDTVADTVKITLGPKGRNVVLEKKFGAPVITNDGVTIAKEIDLEDPFENMGAQLVKEVASKTNDVAGDGTTTATVLAQALVHEGMKHVVAGANPMYVKRGIEKAVEKVVEELKKIAKPVETKQDIAHVAAISANNDEEIGNLIAEAMDKVGKDGVITVEES 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_SYNPW (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH7803) GN=groL2 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.843e-51
Identity = 101/180 (56.11%), Postives = 140/180 (77.78%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +++ +R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GAN ++LK+GIDK    LV E++ +A PI   + I  V TISAGND+ +G MIADA+DKVG +GV+S+E   S
Sbjct:    2 AKRIIYNENARRALEKGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGIDKASDFLVAEIKDKANPISDSNAIAQVGTISAGNDEEVGRMIADAMDKVGKEGVISLEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.843e-51
Identity = 101/180 (56.11%), Postives = 146/180 (81.11%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK + FD +SR +++ GI+ L+DAV +T+GP+GRNV+L++ +G+P++VNDG+T+A+ IEL DP+EN GA LI+EVASKT D AGDGTTTA+VLA+ +IK GL +V +GANPV+++RGI+KTV  LV+E++  A+P+EG + I  VAT+SAG D  +G MI++A+DKV  DGV+++E S S
Sbjct:    2 AKIVEFDDKSRRSLERGINTLADAVRITMGPKGRNVLLEKKYGAPQIVNDGITVAKDIELEDPLENTGAKLIQEVASKTKDIAGDGTTTATVLAQSMIKEGLKNVAAGANPVAVRRGIEKTVSLLVKEIQTVAKPVEG-EAIAQVATVSAGGDAEVGRMISEAMDKVTKDGVITVEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_METI4 (60 kDa chaperonin OS=Methylacidiphilum infernorum (isolate V4) GN=groL PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.407e-51
Identity = 100/183 (54.64%), Postives = 139/183 (75.96%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK + FD+ +R A+  G++KLS AV  TLGP GRNV+LD+ FGSP +  DGVT+A+ +EL DP EN GA L++EVASKT+D AGDGTTTA+VLA  I K GL +VT+GANP+ LKRG+DK V  +V++L++ +  ++G+++IK VAT+SA  D  IG +IADA+DKVG DG +++E +   E
Sbjct:    2 AAKQLIFDESARHALLRGVEKLSKAVKCTLGPAGRNVILDKKFGSPTITKDGVTVAKEVELEDPWENMGAQLVKEVASKTSDVAGDGTTTATVLAESIYKEGLKNVTAGANPMDLKRGVDKAVQAVVKQLKEISHIVKGKEEIKQVATVSANWDTSIGEIIADALDKVGKDGTVTVEEAKHIE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_GALSU (60 kDa chaperonin, chloroplastic OS=Galdieria sulphuraria GN=groL PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.407e-51
Identity = 99/179 (55.31%), Postives = 138/179 (77.09%), Query Frame = 1
Query:  199 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            K I + + +R A++ GID L++AV +TLGP+GRNVV+++ +G P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND AGDGTTT++VLA  I+K G+ +V +GANP++LKRGIDK    ++ ++ + +RP+E    I  VATIS+GND+ IG MIADAI+KVG +GV+SIE   S
Sbjct:    3 KQILYQENARKALEKGIDILAEAVSVTLGPKGRNVVIEKKYGPPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDVAGDGTTTSTVLAHAIVKQGMRNVAAGANPIALKRGIDKATQFIINKISEYSRPVEDNKAITQVATISSGNDENIGKMIADAIEKVGREGVISIEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_BACTR (60 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groL PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.407e-51
Identity = 103/181 (56.91%), Postives = 142/181 (78.45%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK+I F + +R AM  G+DKL+DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANP+ +++GI+K V   VEEL+  ++PI+G++ I  VA ISA  D+ +G +IA+A+++VG DGV+++E S  F
Sbjct:    2 AKEIKFSEEARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGIRKGIEKAVAVAVEELKAISKPIQGKESIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGF 181          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_AMOA51.080e-5153.8560 kDa chaperonin OS=Amoebophilus asiaticus (strai... [more]
CH602_PROMA1.080e-5154.4060 kDa chaperonin 2 OS=Prochlorococcus marinus GN=... [more]
CH601_SYNS91.411e-5156.0460 kDa chaperonin 1 OS=Synechococcus sp. (strain C... [more]
CH60_SYNR31.843e-5155.5660 kDa chaperonin OS=Synechococcus sp. (strain RCC... [more]
CH60_DICTD1.843e-5155.8760 kDa chaperonin OS=Dictyoglomus turgidum (strain... [more]
CH602_SYNPW1.843e-5156.1160 kDa chaperonin 2 OS=Synechococcus sp. (strain W... [more]
CH601_TRIEI1.843e-5156.1160 kDa chaperonin 1 OS=Trichodesmium erythraeum (s... [more]
CH60_METI42.407e-5154.6460 kDa chaperonin OS=Methylacidiphilum infernorum ... [more]
CH60_GALSU2.407e-5155.3160 kDa chaperonin, chloroplastic OS=Galdieria sulp... [more]
CH60_BACTR2.407e-5156.9160 kDa chaperonin OS=Bacillus thermoglucosidasius ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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