CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CHLTE (60 kDa chaperonin OS=Chlorobium tepidum GN=groL PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.105e-51
Identity = 101/183 (55.19%), Postives = 137/183 (74.86%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AKDI FD  +R  ++ G+DKL++AV +TLGP GRNV++D+ FG+P    DGVT+A+ IEL DP+EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +VT+GA P+ LKRGID+ V  +V EL   +R I G+ +I  V TISA ND  IG +IA+A+DKVG DGV+++E +   E
Sbjct:    2 TAKDILFDAEARTKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELVDPVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVTAGARPIDLKRGIDRAVKEVVAELRNISRSISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGME 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_PROMM (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL2 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.105e-51
Identity = 100/180 (55.56%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +++++R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GAN +SLK+GIDK    LV ++E+ A+PI   + I    TI+AGND+ +G MIADA+DKVG +GV+S+E   S
Sbjct:    2 AKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAISLKKGIDKASDFLVSKIEELAKPISDSNAIAQCGTIAAGNDEEVGQMIADAMDKVGKEGVISLEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_PROM3 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL1 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.105e-51
Identity = 100/180 (55.56%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +++++R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GAN +SLK+GIDK    LV ++E+ A+PI   + I    TI+AGND+ +G MIADA+DKVG +GV+S+E   S
Sbjct:    2 AKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAISLKKGIDKASDFLVSKIEELAKPISDSNAIAQCGTIAAGNDEEVGQMIADAMDKVGKEGVISLEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_GEOTN (60 kDa chaperonin OS=Geobacillus thermodenitrificans (strain NG80-2) GN=groL PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.362e-51
Identity = 103/181 (56.91%), Postives = 141/181 (77.90%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSF 735
            AK+I F + +R AM  G+DKL+DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +V +GANP+ ++RGI+K V   VEEL+  ++PI+G++ I  VA ISA  D+ +G +IA+A+++VG DGV+++E S  F
Sbjct:    2 AKEIKFSEEARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVAAGANPMGIRRGIEKAVAVAVEELKAISKPIKGKESIAQVAAISAA-DEEVGQLIAEAMERVGNDGVITLEESKGF 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLOBB (60 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groL PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.362e-51
Identity = 104/180 (57.78%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK + F + +R +MQ G+DKL+D V +TLGP+GRNVVLD+ FGSP + NDGV+IAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI   V   VEE++K ++P+EG++DI  VA ISA  D+ IG +IADA++KVG +GV++IE S S
Sbjct:    2 AKMLKFGEDARRSMQVGVDKLADTVKVTLGPKGRNVVLDKKFGSPLITNDGVSIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRNGIRMAVDKAVEEIKKISKPVEGKEDIARVAAISAA-DEEIGKLIADAMEKVGNEGVITIEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CLOBA (60 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groL PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.362e-51
Identity = 104/180 (57.78%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK + F + +R +MQ G+DKL+D V +TLGP+GRNVVLD+ FGSP + NDGV+IAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI   V   VEE++K ++P+EG++DI  VA ISA  D+ IG +IADA++KVG +GV++IE S S
Sbjct:    2 AKMLKFGEDARRSMQVGVDKLADTVKVTLGPKGRNVVLDKKFGSPLITNDGVSIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRNGIRMAVDKAVEEIKKISKPVEGKEDIARVAAISAA-DEEIGKLIADAMEKVGNEGVITIEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_ARCB4 (60 kDa chaperonin OS=Arcobacter butzleri (strain RM4018) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51
Identity = 98/178 (55.06%), Postives = 137/178 (76.97%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            AK+I F   +R  + +G++KL+DAV +T+GPRGRNV+L + FG+P +  DGV++AR IEL D +EN GA L++EVASKTND AGDGTTTA+VLA  I K GL +VT+GANP+SLKRG+DK    ++ EL+K ++ +  + +I+ VATISA +D  IG MIA+A+DKVG DGV+++E +
Sbjct:    2 AKEILFSDNARNRLYSGVEKLADAVKVTMGPRGRNVLLQKSFGAPTITKDGVSVAREIELKDTLENMGAQLVKEVASKTNDEAGDGTTTATVLAHSIFKEGLRNVTAGANPISLKRGMDKACEAILAELKKSSKVVANKTEIEQVATISANSDSAIGKMIAEAMDKVGKDGVITVEEA 179          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH601_PROMT (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL2A) GN=groL1 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51
Identity = 98/180 (54.44%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +++++R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GAN ++LK+GIDK    LVE+++  ++PI   + I    TI+AGND+ +G MIADA+DKVG +GV+S+E   S
Sbjct:    2 AKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLKNVAAGANAITLKKGIDKATEFLVEKIKDHSKPISDSNAIAQCGTIAAGNDEEVGKMIADAMDKVGKEGVISLEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_SULSY (60 kDa chaperonin OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.145e-51
Identity = 101/183 (55.19%), Postives = 141/183 (77.05%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK + +   +RA ++AG+DKL++AV +TLGPRGR V+L++ +GSP V  DGV++A+ IEL DP EN  A L++EVASKT D AGDGTTTA+VL + I + GL ++ SGANP+ +KRGID+ V  +VEEL+K ++P+ GR +I+ VATISA ND  IG +IADA++KVG DGV+++E S S E
Sbjct:    2 AAKKLVYGDEARAKLKAGVDKLANAVKVTLGPRGREVILEKKWGSPVVTKDGVSVAKEIELTDPYENMAAQLVKEVASKTADVAGDGTTTATVLTQAIYEEGLKAIASGANPIYVKRGIDEAVKIIVEELKKISKPVTGRKEIEQVATISANNDPEIGKIIADAMEKVGKDGVITVEESKSAE 184          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_RHOMR (60 kDa chaperonin OS=Rhodothermus marinus GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.145e-51
Identity = 100/183 (54.64%), Postives = 139/183 (75.96%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            +AK I F+  +R A++ G+DKL+DAV +TLGP+GRNV++++ FG+P V  DGVT+A+ IEL D +EN GA +++EVASKT+D AGDGTTTA+VLA+ I+  GL SVT+GANP+ LKRGIDK V  +V EL K ++ ++ ++ I  VATISA  D  IG +IADA +KVG DGV+++E +   E
Sbjct:    2 AAKQITFNADARMALKRGVDKLADAVKVTLGPKGRNVIIEKKFGAPTVTKDGVTVAKEIELEDKLENVGAQMVKEVASKTSDVAGDGTTTATVLAQAILTAGLKSVTAGANPMDLKRGIDKAVEVVVAELRKMSQEVQDKNRIAQVATISANGDKAIGQLIADAFEKVGKDGVITVEEAKGTE 184          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CHLTE4.105e-5155.1960 kDa chaperonin OS=Chlorobium tepidum GN=groL PE... [more]
CH602_PROMM4.105e-5155.5660 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH601_PROM34.105e-5155.5660 kDa chaperonin 1 OS=Prochlorococcus marinus (st... [more]
CH60_GEOTN5.362e-5156.9160 kDa chaperonin OS=Geobacillus thermodenitrifica... [more]
CH60_CLOBB5.362e-5157.7860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBA5.362e-5157.7860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_ARCB47.002e-5155.0660 kDa chaperonin OS=Arcobacter butzleri (strain R... [more]
CH601_PROMT7.002e-5154.4460 kDa chaperonin 1 OS=Prochlorococcus marinus (st... [more]
CH60_SULSY9.145e-5155.1960 kDa chaperonin OS=Sulfurihydrogenibium sp. (str... [more]
CH60_RHOMR9.145e-5154.6460 kDa chaperonin OS=Rhodothermus marinus GN=groL ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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