CX671660

Overview
NameCX671660
Unique NameCX671660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_SYNY3 (60 kDa chaperonin 2 OS=Synechocystis sp. (strain PCC 6803) GN=groL2 PE=1 SV=4)

HSP 1 Score: 199.904 bits (507), Expect = 1.194e-50
Identity = 99/180 (55.00%), Postives = 145/180 (80.56%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLD-EFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            +K I+F   SR +++AGI+ L+DAV +TLGP+GRNV+L+ ++G+P++VNDG+T+A+ IEL++P ENAGA LI+EVASKT + AGDGTTTA+++A+ +++ GL +V +GANPV+L+RGI+K    LV+E+E  A+P+EG   I  VAT+S+GND  +G MIADA+DKV  DGV+++E S S
Sbjct:    2 SKLISFKDESRRSLEAGINALADAVRITLGPKGRNVLLEKQYGAPQIVNDGITVAKEIELSNPEENAGAKLIQEVASKTKEIAGDGTTTATIIAQALVREGLRNVAAGANPVALRRGIEKVTTFLVQEIEAVAKPVEG-SAIAQVATVSSGNDPEVGAMIADAMDKVTKDGVITVEESKS 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_ACAM1 (60 kDa chaperonin 2 OS=Acaryochloris marina (strain MBIC 11017) GN=groL2 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.194e-50
Identity = 101/180 (56.11%), Postives = 139/180 (77.22%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +++ +R A++ G+D L ++V +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K G+ +V +GAN +SLKRGI+K    LVE++ + AR +E    I  V TISAGNDD +G MIA+A+DKVG +GV+S+E   S
Sbjct:    2 AKRIIYNENARRALEKGMDILCESVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDNIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKEGMRNVVAGANAISLKRGIEKAAGFLVEKIAENARSVEDSTAIAQVGTISAGNDDEVGQMIANAMDKVGKEGVISLEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_DICT6 (60 kDa chaperonin OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=groL PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.560e-50
Identity = 99/179 (55.31%), Postives = 139/179 (77.65%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            +AK ++ D ++R A+  G+D ++D V +TLGP+GRNVVL++ FG+P + NDGVTIA+ I+L DP EN GA L++EVASKTND AGDGTTTA+VLA+ ++  G+  V +GANP+ ++RGI+K V  +VEEL+K A+P+E + DI  VA ISA ND  IG +IA+A+DKVG DGV+++E S
Sbjct:    2 AAKLVSLDMQARTALIRGLDIVADTVKITLGPKGRNVVLEKKFGAPVITNDGVTIAKEIDLEDPFENMGAQLVKEVASKTNDVAGDGTTTATVLAQALVHEGMKHVVAGANPMYVRRGIEKAVEKVVEELKKIAKPVETKQDIAHVAAISANNDTEIGNLIAEAMDKVGKDGVITVEES 180          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_PELTS (60 kDa chaperonin OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.037e-50
Identity = 101/179 (56.42%), Postives = 141/179 (78.77%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            + K+I F + +R +++ G++ L++AV +TLGP+GRNVVL++ FGSP +VNDGVTIAR IEL+DP EN GA L++EVA+KTND AGDGTTTA VLA+ I++ GL +V +GANP+ +KRGI+K V   VE ++  A+ IE +  I  VATISA ND++IG +IADA++KVG DGV+++E S
Sbjct:    2 AGKEIIFREDARRSLEKGVNALAEAVKITLGPKGRNVVLEKKFGSPMIVNDGVTIAREIELSDPFENMGAQLVKEVATKTNDVAGDGTTTACVLAQAIVREGLKNVAAGANPMIIKRGIEKAVDKAVEAIKNSAKTIESKSAIAQVATISA-NDEMIGNLIADAMEKVGKDGVITVEES 179          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH60_CARHZ (60 kDa chaperonin OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.037e-50
Identity = 102/179 (56.98%), Postives = 144/179 (80.45%), Query Frame = 1
Query:  193 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESS 726
            + K I F + +R A++ G++ L+DAV +TLGP+GRNVVL++ FGSP+++NDGV+IAR IELADP+EN GA L++EVA+KTND AGDGTTTA+VLA+ II+ GL +VT+GANP+ L++GI+K V   VEE++  A+P+E  + I  VA ISA ND+ IG +IA+A++KVG DGV+++E S
Sbjct:    2 AGKQILFREDARRALERGVNALADAVKVTLGPKGRNVVLEKKFGSPQIINDGVSIAREIELADPVENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVTAGANPMILRKGIEKAVAKAVEEIKAIAKPVETSEAIAQVAAISA-NDEEIGKLIAEAMEKVGKDGVITVEES 179          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_SALRD (60 kDa chaperonin 2 OS=Salinibacter ruber (strain DSM 13855) GN=groL2 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.037e-50
Identity = 97/182 (53.30%), Postives = 135/182 (74.18%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK I FD  +R+A+Q G+D+++ AV +TLGP+GRNVVL++ FG+P +  DGVT+A+ IEL + + N GA +++E ASKTND AGDGTTTA+VLA+ +I  G+ SVTSGANP+ +KRGI      +V  L  ++ P+EG+D I  VATISA NDD IG +IADA ++VG DGV+++E +   E
Sbjct:    2 AKQIKFDSDARSALQEGVDQMAKAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEERLPNIGAQVLKEAASKTNDDAGDGTTTATVLAQSVINAGMKSVTSGANPMDVKRGITAAAEEVVTHLRNQSDPVEGKDRISQVATISANNDDAIGDLIADAFERVGQDGVITVEEARGIE 183          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_THEVL (60 kDa chaperonin 2 OS=Thermosynechococcus vulcanus GN=groL2 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.661e-50
Identity = 100/182 (54.95%), Postives = 143/182 (78.57%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK +AF + SR +++ GI+ L+DAV +TLGP+GRNVVL++ +G+P++VNDGVTIA+ IEL D  EN GA L+REVA+KTND  GDGTTTA+VLA+ +I+ GL +V +G NP++LKRG++K +  +V+ + + A+P+EG D I  VAT+SAGND  +G MI++A+ KVG DGV++IE S S +
Sbjct:    2 AKLVAFHEESRRSLERGINALADAVKITLGPKGRNVVLEKKYGAPQIVNDGVTIAKEIELEDAYENTGAQLMREVAAKTNDVVGDGTTTATVLAQALIREGLKNVAAGTNPIALKRGMEKAIKTIVDGIAEVAKPVEG-DMIAQVATVSAGNDPEVGAMISEAMAKVGKDGVITIEESKSLQ 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_THEEB (60 kDa chaperonin 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=groL2 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.661e-50
Identity = 100/182 (54.95%), Postives = 143/182 (78.57%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFE 738
            AK +AF + SR +++ GI+ L+DAV +TLGP+GRNVVL++ +G+P++VNDGVTIA+ IEL D  EN GA L+REVA+KTND  GDGTTTA+VLA+ +I+ GL +V +G NP++LKRG++K +  +V+ + + A+P+EG D I  VAT+SAGND  +G MI++A+ KVG DGV++IE S S +
Sbjct:    2 AKLVAFHEESRRSLERGINALADAVKITLGPKGRNVVLEKKYGAPQIVNDGVTIAKEIELEDAYENTGAQLMREVAAKTNDVVGDGTTTATVLAQALIREGLKNVAAGTNPIALKRGMEKAIKTIVDGIAEVAKPVEG-DMIAQVATVSAGNDPEVGAMISEAMAKVGKDGVITIEESKSLQ 182          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_PROM9 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=groL2 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.661e-50
Identity = 97/180 (53.89%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +++++R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GAN ++LK+GIDK    LV ++++ ++PI   + I    TI+AGNDD +G MIA+A+DKVG +GV+S+E   S
Sbjct:    2 AKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGIDKATEFLVGKIQENSKPISDSNAIAQCGTIAAGNDDEVGQMIANAMDKVGKEGVISLEEGKS 181          
BLAST of CX671660 vs. ExPASy Swiss-Prot
Match: CH602_PROM0 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9301) GN=groL2 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.661e-50
Identity = 97/180 (53.89%), Postives = 141/180 (78.33%), Query Frame = 1
Query:  196 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSS 732
            AK I +++++R A++ GID L+++V +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL D +EN G ALIR+ ASKTND+AGDGTTTA+VLA  ++K GL +V +GAN ++LK+GIDK    LV ++++ ++PI   + I    TI+AGNDD +G MIA+A+DKVG +GV+S+E   S
Sbjct:    2 AKRIIYNEQARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGIDKATEFLVGKIQENSKPISDSNAIAQCGTIAAGNDDEVGQMIANAMDKVGKEGVISLEEGKS 181          
The following BLAST results are available for this feature:
BLAST of CX671660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_SYNY31.194e-5055.0060 kDa chaperonin 2 OS=Synechocystis sp. (strain P... [more]
CH602_ACAM11.194e-5056.1160 kDa chaperonin 2 OS=Acaryochloris marina (strai... [more]
CH60_DICT61.560e-5055.3160 kDa chaperonin OS=Dictyoglomus thermophilum (st... [more]
CH60_PELTS2.037e-5056.4260 kDa chaperonin OS=Pelotomaculum thermopropionic... [more]
CH60_CARHZ2.037e-5056.9860 kDa chaperonin OS=Carboxydothermus hydrogenofor... [more]
CH602_SALRD2.037e-5053.3060 kDa chaperonin 2 OS=Salinibacter ruber (strain ... [more]
CH602_THEVL2.661e-5054.9560 kDa chaperonin 2 OS=Thermosynechococcus vulcanu... [more]
CH602_THEEB2.661e-5054.9560 kDa chaperonin 2 OS=Thermosynechococcus elongat... [more]
CH602_PROM92.661e-5053.8960 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM02.661e-5053.8960 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671660 ID=CX671660; Name=CX671660; organism=Citrus sinensis; type=EST; length=740bp
GTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCCGTT
TGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTTCCA
TTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAGAAT
CAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGCCAA
AGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCATCG
ATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGAAAT
GTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGTAAC
AATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTGCTG
CTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGATGGA
ACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACTCCT
GAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTGATA
AAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCTATC
GAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAATGA
TGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTCCTG
ATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGAC
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