CX671659

Overview
NameCX671659
Unique NameCX671659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_CORGB (60 kDa chaperonin 1 OS=Corynebacterium glutamicum (strain R) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.563e-47
Identity = 101/204 (49.51%), Postives = 138/204 (67.65%), Query Frame = -2
Query:  199 GTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 810
            GTAR++T+ KD T I+  A S +E++AR AQ+++E+A TDS +D EK  ER+AKLSGG+AVI+VGAATETE+ DRKLR+EDA NA  AA +EG++ GGG+ALV +++ + A  ++ E  D+++G   +  AL  PA  IA NA                  G+NA T +Y N++  GVIDP KVT  A+ NA SVA MVLTT+A
Sbjct:  316 GTARRITVSKDETVIVDGAGSAEEVEARRAQIRREIANTDSTWDREKAEERLAKLSGGIAVIRVGAATETEVNDRKLRVEDAINAARAAAQEGVIAGGGSALVQIAETLKAYAEEFE-GDQKVGVRALATALGKPAYWIASNAGLDGSVVVARTAALPNGEGFNAATLEYGNLINDGVIDPVKVTHSAVVNATSVARMVLTTEA 518          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_CHLAA (60 kDa chaperonin 1 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.563e-47
Identity = 103/212 (48.58%), Postives = 145/212 (68.40%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNA-----XXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG ARKV   KD TTII     +  I+ARI Q++ ++A T S +D EKL ER+AKL+GGVAVIKVGAATE EL+++K R+EDA +AT AA+EEGIVPGGG AL++    +PA+ + ++   DE++G  I+++AL  P  ++A NA                +  + T GYN +T +Y +M++ G+IDP KVTR A+QNA S+AGM+LTT+A+
Sbjct:  315 LGRARKVIATKDDTTIIEGRGDEAAIRARIEQIRAQIATTTSDFDREKLQERLAKLAGGVAVIKVGAATEPELKEKKHRVEDALSATRAAVEEGIVPGGGVALINA---IPALDNVQVAHEDEKVGLQILRRALEEPLRILARNAGEDGSVIIANVRRLQEEKGDKTIGYNVLTGQYGSMIEQGIIDPVKVTRSAVQNAVSIAGMILTTEAL 523          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_UNCTG (60 kDa chaperonin OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 100/207 (48.31%), Postives = 142/207 (68.60%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+++ + K++TTI++    K EI+ARIAQ++K++ +T S YD EKL ER+AKL GGVAV+ VGAATE E++ +K ++EDA NAT A +EEGIV GGG AL  L       K    D+DE+ G +IV KAL  P  +I  NA           K+S+ T  GY+A  ++Y +M++AG++DPAKVTR AL+NAAS+A ++LTT+ +
Sbjct:  315 LGQAKRIVVDKENTTIVSGLGDKKEIEARIAQIRKQIEDTKSDYDKEKLQERLAKLVGGVAVVNVGAATEVEMKTKKFKVEDALNATRAGVEEGIVAGGGVAL--LKTQTVLEKINAADSDEKTGIEIVLKALEGPIRMIIENAGLEASVVVDKVKNSKDTAFGYDADNNEYVDMIKAGIVDPAKVTRTALENAASIASLILTTETL 519          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_THEBR (60 kDa chaperonin OS=Thermoanaerobacter brockii GN=groL PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 106/207 (51.21%), Postives = 142/207 (68.60%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG AR+V + K+ TTI+  A    EI+ R+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+ GAATETEL+++K RIEDA  AT AA+EEGIVPGGG AL+++ + V  + D LE  D + GA IV +AL  P   IA NA           K + +   GY+A  +++ +M +AG++DP KVTR ALQNAAS+A M+LTT+AI
Sbjct:  315 LGRARQVKVTKEYTTIVGGAGDPSEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSLE-GDFKTGAKIVLRALEEPVRQIATNAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAI 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STRP3 (60 kDa chaperonin OS=Streptococcus pyogenes serotype M3 GN=groL PE=3 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 106/206 (51.46%), Postives = 139/206 (67.48%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A K+T+ KDST I+  + S + I  RIA +K +L  T S +D EKL ER+AKL GGVAVIKVGA TET L++ KLRIEDA NAT AA+EEGIV GGG AL+ + + V A++    + D+  G +IV +AL  P   IA NA           K+S   TG+NA T ++ +M++ G+IDP KVTR ALQNAASVA ++LTT+A+
Sbjct:  315 LGQAAKITVDKDSTVIVEGSGSSEAIANRIALIKSQLETTTSDFDREKLQERLAKLGGGVAVIKVGAPTETALKEMKLRIEDALNATRAAVEEGIVAGGGTALITVIEKVAALE---LEGDDATGRNIVLRALEEPVRQIALNAGYEGSVVIDKLKNSPAGTGFNAATGEWVDMIKTGIIDPVKVTRSALQNAASVASLILTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_PSEU5 (60 kDa chaperonin OS=Pseudomonas stutzeri (strain A1501) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 95/206 (46.12%), Postives = 144/206 (69.90%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A++V + K++TTII  A ++ +I+AR+AQ++K++ +T S YD EKL ER+AKL+GGVAVIKVGA TE E++++K R+EDA +AT AA+EEG+VPGGG ALV     +  +K   ++ D+ +G  ++++A+ AP   I  NA           K      G+NA +D Y +M++ G++DPAKVTR ALQ AAS+ G+++TT+A+
Sbjct:  317 LGNAKRVVLNKENTTIIDGAGAQADIEARVAQIRKQIEDTTSDYDKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAISELKG--DNEDQNVGIALLRRAVEAPLRQIVANAGGEPSVVVDKVKQGSGNYGFNAASDTYGDMIEMGILDPAKVTRSALQAAASIGGLMVTTEAM 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_PSEFS (60 kDa chaperonin OS=Pseudomonas fluorescens (strain SBW25) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 97/205 (47.32%), Postives = 144/205 (70.24%), Query Frame = -2
Query:  199 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 813
            LG+A++VTI K++T I+  A  + +IQARI Q++ ++AET S YD EKL ER+AKLSGGVAVIKVGA +E E++++K R+EDA +AT AA+EEG+VPGGG AL+   + +  +    ++AD+ +G  ++++A+ AP   IA N+           K+ +   GYNA T  Y +M++ G++DP KVTR ALQ AAS+ G++LTT+A
Sbjct:  317 LGSAKRVTISKENTIIVDGAGVEQDIQARITQIRAQVAETSSDYDREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRALEALTNLTG--DNADQNVGIAVLRRAVEAPLRQIAANSGDEPSVVVNEVKNGKGNYGYNAATGVYGDMIEMGILDPTKVTRSALQAAASIGGLILTTEA 519          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_COXBU (60 kDa chaperonin OS=Coxiella burnetii GN=groL PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 94/207 (45.41%), Postives = 144/207 (69.57%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+ +   + ++  ++E+ D+R+G +I ++A+  P S I  N             +  +   GYNA T +Y +M++ G++DP KVTR ALQNAAS+AG+++TT+ +
Sbjct:  317 LGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRVLKSLDSV--EVENEDQRVGVEIARRAMAYPLSQIVKNTGVQAAVVADKVLNHKDVNYGYNAATGEYGDMIEMGILDPTKVTRTALQNAASIAGLMITTECM 521          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_COXBR (60 kDa chaperonin OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 94/207 (45.41%), Postives = 144/207 (69.57%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+ +   + ++  ++E+ D+R+G +I ++A+  P S I  N             +  +   GYNA T +Y +M++ G++DP KVTR ALQNAAS+AG+++TT+ +
Sbjct:  317 LGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRVLKSLDSV--EVENEDQRVGVEIARRAMAYPLSQIVKNTGVQAAVVADKVLNHKDVNYGYNAATGEYGDMIEMGILDPTKVTRTALQNAASIAGLMITTECM 521          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_COXBN (60 kDa chaperonin OS=Coxiella burnetii (strain Dugway 5J108-111) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 94/207 (45.41%), Postives = 144/207 (69.57%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+ +   + ++  ++E+ D+R+G +I ++A+  P S I  N             +  +   GYNA T +Y +M++ G++DP KVTR ALQNAAS+AG+++TT+ +
Sbjct:  317 LGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRVLKSLDSV--EVENEDQRVGVEIARRAMAYPLSQIVKNTGVQAAVVADKVLNHKDVNYGYNAATGEYGDMIEMGILDPTKVTRTALQNAASIAGLMITTECM 521          
The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_CORGB5.563e-4749.5160 kDa chaperonin 1 OS=Corynebacterium glutamicum ... [more]
CH601_CHLAA5.563e-4748.5860 kDa chaperonin 1 OS=Chloroflexus aurantiacus (s... [more]
CH60_UNCTG7.266e-4748.3160 kDa chaperonin OS=Uncultured termite group 1 ba... [more]
CH60_THEBR7.266e-4751.2160 kDa chaperonin OS=Thermoanaerobacter brockii GN... [more]
CH60_STRP37.266e-4751.4660 kDa chaperonin OS=Streptococcus pyogenes seroty... [more]
CH60_PSEU57.266e-4746.1260 kDa chaperonin OS=Pseudomonas stutzeri (strain ... [more]
CH60_PSEFS7.266e-4747.3260 kDa chaperonin OS=Pseudomonas fluorescens (stra... [more]
CH60_COXBU7.266e-4745.4160 kDa chaperonin OS=Coxiella burnetii GN=groL PE=... [more]
CH60_COXBR7.266e-4745.4160 kDa chaperonin OS=Coxiella burnetii (strain RSA... [more]
CH60_COXBN7.266e-4745.4160 kDa chaperonin OS=Coxiella burnetii (strain Dug... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTTTTTACAAAAAAGACACGATTTTATATCAATTAAGTA
AAACTTGTCTTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAA
AACTCCTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTG
TGGCGGAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAG
CCTGAGTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCA
CATCTTGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTC
ATACTTGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTATCTTTCA
CCTTCTCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGT
GATGCAGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTC
ATCTGCATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGAT
GAACCAGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCA
AAAGTTGCATTCTTGGCATCTTCAATACGGAGTTTACGGTCCTCAAGCTC
AGTTTCTGTGGCAGCTCCAACTTTAATAACAGCAACCCCGCCAGACAATT
TAGCAATTCTCTCAGCAAGTTTCTCTGAGTCATAAACAGAATCCGTCTCA
GCCAACTCCTTTTTCAGCTGTGCAATTCTAGCTTGTATTTCATCCTTTGA
TGCAGCATCAGCAATAATGGTAGTGGAGTCCTTTCTGATGGTCACCTTTC
TAGCTGTACCTAGCTGC
back to top