CX671659

Overview
NameCX671659
Unique NameCX671659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH602_MYCTU (60 kDa chaperonin 2 OS=Mycobacterium tuberculosis GN=groL2 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 105/206 (50.97%), Postives = 134/206 (65.05%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG ARKV + KD TTI+  A   D I  R+AQ+++E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG  L+  +   P + +   + DE  GA+IV+ AL AP   IA N+           ++     G NA T  YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  315 LGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAA---PTLDELKLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH602_MYCLE (60 kDa chaperonin 2 OS=Mycobacterium leprae GN=groL2 PE=3 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 109/207 (52.66%), Postives = 138/207 (66.67%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG ARKV + KD TTI+  A   D I  R+AQ++ E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG  L+  +   PA+ DKL+   DE  GA+IV+ AL AP   IA N+           ++     G NA T +YE++L+AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  315 LGKARKVVMTKDETTIVEGAGDTDAIAGRVAQIRTEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAA---PAL-DKLKLTGDEATGANIVKVALEAPLKQIAFNSGMEPGVVAEKVRNLSVGHGLNAATGEYEDLLKAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH602_MYCBO (60 kDa chaperonin 2 OS=Mycobacterium bovis GN=groL2 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 105/206 (50.97%), Postives = 134/206 (65.05%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG ARKV + KD TTI+  A   D I  R+AQ+++E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG  L+  +   P + +   + DE  GA+IV+ AL AP   IA N+           ++     G NA T  YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  315 LGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAA---PTLDELKLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_RHOSR (60 kDa chaperonin 1 OS=Rhodococcus sp. (strain RHA1) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 106/206 (51.46%), Postives = 135/206 (65.53%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG ARKV I KD TTI+  A   + I  R+AQ++ E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+      PA+ D   + DE  GA+IV+ AL AP   IA NA           ++     G NA T++Y ++L+AG+ DP KVTR ALQNAAS+A + LTT+A+
Sbjct:  315 LGQARKVVITKDETTIVEGAGDPEAIAGRVAQIRAEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALL---QSAPALDDLKLEGDEATGANIVRVALEAPLKQIAFNAGLEPGVVAEKVRNLPAGHGLNASTNEYGDLLEAGINDPVKVTRSALQNAASIAALFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_RHOPA (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 102/207 (49.28%), Postives = 145/207 (70.05%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+KV I K++TTI+  A  K EI+AR++Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+     V  I +  ++ D + G +IV KAL AP   IA NA            +++  T G++A T++Y +ML  G++DPAKV R ALQ+A+SVA +++TT+A+
Sbjct:  317 LGRAKKVVIDKENTTIVNGAGKKPEIEARVSQIKAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRISN--DNPDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKTETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDASSVASLLVTTEAM 521          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_NITWN (60 kDa chaperonin 1 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 99/207 (47.83%), Postives = 145/207 (70.05%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+KV I K++TTI+  A  K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGI+PGGG AL+     + A+K   ++ D++ G DIV++A+  PA  I  NA            + + +  G+NA T +Y++++  GVIDPAKV R ALQ+AASVA +++TT+A+
Sbjct:  317 LGRAKKVVIDKENTTIVDGAGRKKDIEARVTQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRALKALDAVKP--DNPDQKAGVDIVRRAIQVPARQIIQNAGEDGSLVVGKLLEKNTYNWGFNAATGEYQDLVGVGVIDPAKVVRTALQDAASVASLLITTEAL 521          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_MYCTA (60 kDa chaperonin 1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 105/206 (50.97%), Postives = 134/206 (65.05%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG ARKV + KD TTI+  A   D I  R+AQ+++E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG  L+  +   P + +   + DE  GA+IV+ AL AP   IA N+           ++     G NA T  YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  315 LGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAA---PTLDELKLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_MYCBP (60 kDa chaperonin 1 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.266e-47
Identity = 105/206 (50.97%), Postives = 134/206 (65.05%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG ARKV + KD TTI+  A   D I  R+AQ+++E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG  L+  +   P + +   + DE  GA+IV+ AL AP   IA N+           ++     G NA T  YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  315 LGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAA---PTLDELKLEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_NITOC (60 kDa chaperonin OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.489e-47
Identity = 99/207 (47.83%), Postives = 145/207 (70.05%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+K+T+ K++TTI+  A S D+I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+     +  IKD K  + D+ +G +I ++A+  P   I +N+           K  E   GYNA T ++ +M+  G++DP KV+R ALQNAASVAG+++TT+A+
Sbjct:  317 LGRAKKITVNKENTTIVDGAGSADDIKARVEQVRIQIEEATSDYDKEKLQERVAKLAGGVAVIKVGAATEMEMKEKKARVEDALHATRAAVEEGVVPGGGVALIRA---LLGIKDLKGANHDQDVGINIARRAMEEPLRQIVNNSGEEASVIVNQIKGGEGNYGYNAATGEFGDMIAMGILDPTKVSRTALQNAASVAGLMITTEAM 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_METFK (60 kDa chaperonin OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=groL PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.489e-47
Identity = 101/206 (49.03%), Postives = 138/206 (66.99%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A++V I K++TTII  A S++ I+ RI Q+KK++ +  S YD EKL ER+AKL+GGVAVIKVGAATETE++++K R+EDA +AT AA+EEGIVPGGG AL+     +  +K   ++ D+  G  IV +A+  P   I  NA            +     GYNA    Y ++++ GV+DPAKVTR ALQNAASVA ++LTT A+
Sbjct:  317 LGQAKRVEIGKENTTIIDGAGSENNIKVRIDQIKKQIEDATSDYDREKLQERVAKLAGGVAVIKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRARSSIKELKG--DNPDQDAGIKIVLRAIEEPLRQIVANAGDEPSVVVNKVLEGTGNYGYNASNGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDAL 520          
The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_MYCTU7.266e-4750.9760 kDa chaperonin 2 OS=Mycobacterium tuberculosis ... [more]
CH602_MYCLE7.266e-4752.6660 kDa chaperonin 2 OS=Mycobacterium leprae GN=gro... [more]
CH602_MYCBO7.266e-4750.9760 kDa chaperonin 2 OS=Mycobacterium bovis GN=groL... [more]
CH601_RHOSR7.266e-4751.4660 kDa chaperonin 1 OS=Rhodococcus sp. (strain RHA... [more]
CH601_RHOPA7.266e-4749.2860 kDa chaperonin 1 OS=Rhodopseudomonas palustris ... [more]
CH601_NITWN7.266e-4747.8360 kDa chaperonin 1 OS=Nitrobacter winogradskyi (s... [more]
CH601_MYCTA7.266e-4750.9760 kDa chaperonin 1 OS=Mycobacterium tuberculosis ... [more]
CH601_MYCBP7.266e-4750.9760 kDa chaperonin 1 OS=Mycobacterium bovis (strain... [more]
CH60_NITOC9.489e-4747.8360 kDa chaperonin OS=Nitrosococcus oceani (strain ... [more]
CH60_METFK9.489e-4749.0360 kDa chaperonin OS=Methylobacillus flagellatus (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTTTTTACAAAAAAGACACGATTTTATATCAATTAAGTA
AAACTTGTCTTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAA
AACTCCTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTG
TGGCGGAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAG
CCTGAGTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCA
CATCTTGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTC
ATACTTGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTATCTTTCA
CCTTCTCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGT
GATGCAGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTC
ATCTGCATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGAT
GAACCAGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCA
AAAGTTGCATTCTTGGCATCTTCAATACGGAGTTTACGGTCCTCAAGCTC
AGTTTCTGTGGCAGCTCCAACTTTAATAACAGCAACCCCGCCAGACAATT
TAGCAATTCTCTCAGCAAGTTTCTCTGAGTCATAAACAGAATCCGTCTCA
GCCAACTCCTTTTTCAGCTGTGCAATTCTAGCTTGTATTTCATCCTTTGA
TGCAGCATCAGCAATAATGGTAGTGGAGTCCTTTCTGATGGTCACCTTTC
TAGCTGTACCTAGCTGC
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