CX671659

Overview
NameCX671659
Unique NameCX671659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_RHOP2 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL1 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.239e-46
Identity = 102/207 (49.28%), Postives = 144/207 (69.57%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+KV I K++TTI+  A  K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+     V  I +  ++AD + G +IV KAL AP   IA NA            +++  T G++A T+ Y +ML  G++DPAKV R ALQ+A+SVA +++TT+A+
Sbjct:  317 LGRAKKVVIDKENTTIVGGAGKKPDIEARVQQIKAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRIHN--DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEDYVDMLAKGIVDPAKVVRTALQDASSVAALLVTTEAM 521          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_RENSM (60 kDa chaperonin 1 OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groL1 PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.239e-46
Identity = 106/206 (51.46%), Postives = 133/206 (64.56%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG ARKV + KD TTI+  A   ++I  R+AQ++ E+  TDS YD EKL ER+AKL+GGVAVIK G+ATE EL++RK RIEDA     AA+EEGIVPGGG AL+     V A +    + DE  GA+IV+ A+ AP   IA NA           +      G NA T  YE++L AGV DP KVTR ALQNAAS+AG+ LTT+ +
Sbjct:  315 LGQARKVVVTKDETTIVEGAGDAEQIAGRVAQIRAEIENTDSDYDREKLQERLAKLAGGVAVIKAGSATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALIQAG--VKAFETLQLEGDEATGANIVKVAIDAPLKQIAINAGLEPGVVVDKVRGLPVGHGLNAATGVYEDLLAAGVNDPVKVTRSALQNAASIAGLFLTTEVV 518          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_GLUDA (60 kDa chaperonin 1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL1 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.239e-46
Identity = 98/207 (47.34%), Postives = 145/207 (70.05%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+KV I K++TTI+  A + D+I+ R  Q++ ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E+++RK R++DA +AT AA+EEGIVPGGG AL   S  +  +     + D+R+GA+I++KAL AP   IAHNA            +S ++  G++A    Y++++ AG+IDP KV R ALQ+A+SVAG+++TT+A+
Sbjct:  317 LGRAKKVRIEKENTTIVEGAGASDDIKGRCGQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARASTALGNL--HFHNDDQRVGAEIIRKALQAPLRQIAHNAGEDGAVIAGKVLESNDYNYGFDAQIGDYKDLVAAGIIDPTKVVRTALQDASSVAGLLITTEAM 521          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STRMU (60 kDa chaperonin OS=Streptococcus mutans GN=groL PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46
Identity = 105/206 (50.97%), Postives = 140/206 (67.96%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A +VT+ KDST I+  +  K+ +  R+  +K ++    S +D EKL ER+AKLSGGVAVIKVGAATETEL++ KLRIEDA NAT AA+EEGIV GGG AL+++ + V A+ D  +DA    G ++V +AL  P   IA NA           K+S   TG+NA   ++ +M+ AG+IDP KVTR ALQNAASVA ++LTT+A+
Sbjct:  315 LGQAARVTVDKDSTVIVEGSGGKEAVANRVNLIKSQIETATSDFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVAGGGTALINVIEKVAAL-DLTDDA--ATGRNLVLRALEEPVRQIAKNAGYEGSVIIDKLKNSSAGTGFNAANGEWVDMIDAGIIDPVKVTRSALQNAASVASLILTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_SHEFN (60 kDa chaperonin OS=Shewanella frigidimarina (strain NCIMB 400) GN=groL PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46
Identity = 99/206 (48.06%), Postives = 145/206 (70.39%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LGTA++V I KD+TTII  +  + +I AR++Q+K+++ ++ S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++  +  +  ++ + D++ G  I  +A+ AP   IA NA           K+ E   GYNA  D Y +ML+ G++DP KVTR ALQ AAS+AG+++TT+A+
Sbjct:  317 LGTAKRVIITKDNTTIIDGSGDQVQISARVSQIKQQVEDSTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIKDV--EVLNEDQKHGVVIALRAMEAPLRQIATNAGQEASVVANTVKNGEGNFGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAM 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_PROA2 (60 kDa chaperonin OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=groL PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46
Identity = 96/206 (46.60%), Postives = 145/206 (70.39%), Query Frame = -2
Query:  199 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAP-ASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 813
            LG A  +T+ KD+TTI+      D+I+ARI ++K ++ ++ S YD+EKL ER+AKLSGGVAV+ +GA+TE E++++K R+EDA +AT AA++EGIV GGG AL+  +  + A     E+ D++ G DI+++AL  P   ++A+             K+SE   G+NA T++Y N+++AGV+DP KVTR AL+NAASVAG++LTT+A
Sbjct:  317 LGQAASITVDKDNTTIVDGKGQADDIKARIGEIKGQIEKSTSDYDTEKLQERLAKLSGGVAVLNIGASTEVEMKEKKARVEDALHATRAAVQEGIVAGGGVALIRAAKALDATNP--ENEDQKTGVDIIRRALEEPLRQIVANTGTTDGAVVVEKVKNSEGDYGFNARTEEYMNLIEAGVVDPTKVTRTALENAASVAGILLTTEA 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_PARL1 (60 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groL PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46
Identity = 99/207 (47.83%), Postives = 146/207 (70.53%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A++V+I KD TTI+  A  K +I+AR+AQ+K+++ +T S YD EKL ER+AKL+GGVAVIKVG ATE E+++RK R++DA NAT AA+EEGIVPGGG AL+  S  V  + +  ++ D + G +I+++AL AP   I  NA            +S+    G++A  ++Y +++ AG+IDP KV R ALQ+AAS+AG+++TT+A+
Sbjct:  316 LGKAKRVSITKDDTTIVDGAGKKKDIEARVAQIKRQIEDTTSDYDKEKLQERLAKLAGGVAVIKVGGATEAEVKERKDRVDDALNATRAAVEEGIVPGGGTALLMASKAVGKLVE--DNRDIQAGINIIRRALEAPIRQIVENAGVEGSIVVQKVLESKQANFGFDAQKEEYCDLVAAGIIDPTKVVRTALQDAASIAGLLITTEAM 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_MARMS (60 kDa chaperonin OS=Marinomonas sp. (strain MWYL1) GN=groL PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46
Identity = 99/207 (47.83%), Postives = 141/207 (68.12%), Query Frame = -2
Query:  196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            QLGTA++VT+ K+STTI+  A +   I +R+ Q++ E+A + S YD EKL ER+AKL+GGVAVIK+GAATE  ++++K R++DA +AT AA+EEG+V GGG ALV     +  +K   E+ D+ +G  +  +A+ AP   I  NA           K  E   GYNA T +Y +ML+ G++DPAKVTR ALQ AASVAG+++TT+A+
Sbjct:  316 QLGTAKRVTLTKESTTIVDGAGNAANITSRVEQIRAEIANSSSDYDKEKLQERVAKLAGGVAVIKIGAATELAMKEKKARVDDALHATRAAVEEGVVAGGGVALVRALTKIVDLKG--ENEDQSVGITLALRAMEAPMRQIVINAGAEASVVVDKVKQGEGNFGYNAATGEYGDMLEMGILDPAKVTRSALQAAASVAGLMITTEAM 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_FLAJ1 (60 kDa chaperonin OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=groL PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46
Identity = 102/205 (49.76%), Postives = 140/205 (68.29%), Query Frame = -2
Query:  202 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 813
            LG A++V+I KD+TTI++ A   D I+ R+ Q+K ++  T S YD EKL ER+AKL+GGVAV+ VGAA+E E++++K R++DA +AT AA+EEGIV GGG AL+       A+ D K ++ADE  G  IV +A+ AP   I  NA            +     GYNA TD+Y +ML+AG+IDP KVTR AL+NAASV+GM+LTT+
Sbjct:  317 LGNAKRVSIDKDNTTIVSGAGEADIIKNRVNQIKGQMETTTSDYDKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALLRAK---LALADLKADNADEATGIQIVSRAIEAPLRTIVENAGLEGSVVVAKVAEGSGDFGYNAKTDEYVDMLKAGIIDPKKVTRVALENAASVSGMILTTE 518          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_BRUSU (60 kDa chaperonin OS=Brucella suis GN=groL PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46
Identity = 101/207 (48.79%), Postives = 142/207 (68.60%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+KV+I K++TTI+  A  K EI AR+ Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+  S  + A   K  +AD+  G +IV++A+ APA  I  NA            + +  T GYN    +Y +++  G++DP KV R ALQNAASVAG+++TT+A+
Sbjct:  317 LGRAKKVSISKENTTIVDGAGQKAEIDARVGQIKQQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASTKITA---KGVNADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAM 520          
The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_RHOP21.239e-4649.2860 kDa chaperonin 1 OS=Rhodopseudomonas palustris ... [more]
CH601_RENSM1.239e-4651.4660 kDa chaperonin 1 OS=Renibacterium salmoninarum ... [more]
CH601_GLUDA1.239e-4647.3460 kDa chaperonin 1 OS=Gluconacetobacter diazotrop... [more]
CH60_STRMU1.619e-4650.9760 kDa chaperonin OS=Streptococcus mutans GN=groL ... [more]
CH60_SHEFN1.619e-4648.0660 kDa chaperonin OS=Shewanella frigidimarina (str... [more]
CH60_PROA21.619e-4646.6060 kDa chaperonin OS=Prosthecochloris aestuarii (s... [more]
CH60_PARL11.619e-4647.8360 kDa chaperonin OS=Parvibaculum lavamentivorans ... [more]
CH60_MARMS1.619e-4647.8360 kDa chaperonin OS=Marinomonas sp. (strain MWYL1... [more]
CH60_FLAJ11.619e-4649.7660 kDa chaperonin OS=Flavobacterium johnsoniae (st... [more]
CH60_BRUSU1.619e-4648.7960 kDa chaperonin OS=Brucella suis GN=groL PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTTTTTACAAAAAAGACACGATTTTATATCAATTAAGTA
AAACTTGTCTTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAA
AACTCCTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTG
TGGCGGAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAG
CCTGAGTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCA
CATCTTGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTC
ATACTTGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTATCTTTCA
CCTTCTCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGT
GATGCAGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTC
ATCTGCATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGAT
GAACCAGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCA
AAAGTTGCATTCTTGGCATCTTCAATACGGAGTTTACGGTCCTCAAGCTC
AGTTTCTGTGGCAGCTCCAACTTTAATAACAGCAACCCCGCCAGACAATT
TAGCAATTCTCTCAGCAAGTTTCTCTGAGTCATAAACAGAATCCGTCTCA
GCCAACTCCTTTTTCAGCTGTGCAATTCTAGCTTGTATTTCATCCTTTGA
TGCAGCATCAGCAATAATGGTAGTGGAGTCCTTTCTGATGGTCACCTTTC
TAGCTGTACCTAGCTGC
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