CX671659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_RHOP2 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL1 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.239e-46 Identity = 102/207 (49.28%), Postives = 144/207 (69.57%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG A+KV I K++TTI+ A K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+ V I + ++AD + G +IV KAL AP IA NA +++ T G++A T+ Y +ML G++DPAKV R ALQ+A+SVA +++TT+A+ Sbjct: 317 LGRAKKVVIDKENTTIVGGAGKKPDIEARVQQIKAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRIHN--DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEDYVDMLAKGIVDPAKVVRTALQDASSVAALLVTTEAM 521
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_RENSM (60 kDa chaperonin 1 OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groL1 PE=3 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.239e-46 Identity = 106/206 (51.46%), Postives = 133/206 (64.56%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG ARKV + KD TTI+ A ++I R+AQ++ E+ TDS YD EKL ER+AKL+GGVAVIK G+ATE EL++RK RIEDA AA+EEGIVPGGG AL+ V A + + DE GA+IV+ A+ AP IA NA + G NA T YE++L AGV DP KVTR ALQNAAS+AG+ LTT+ + Sbjct: 315 LGQARKVVVTKDETTIVEGAGDAEQIAGRVAQIRAEIENTDSDYDREKLQERLAKLAGGVAVIKAGSATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALIQAG--VKAFETLQLEGDEATGANIVKVAIDAPLKQIAINAGLEPGVVVDKVRGLPVGHGLNAATGVYEDLLAAGVNDPVKVTRSALQNAASIAGLFLTTEVV 518
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_GLUDA (60 kDa chaperonin 1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL1 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.239e-46 Identity = 98/207 (47.34%), Postives = 145/207 (70.05%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG A+KV I K++TTI+ A + D+I+ R Q++ ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E+++RK R++DA +AT AA+EEGIVPGGG AL S + + + D+R+GA+I++KAL AP IAHNA +S ++ G++A Y++++ AG+IDP KV R ALQ+A+SVAG+++TT+A+ Sbjct: 317 LGRAKKVRIEKENTTIVEGAGASDDIKGRCGQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARASTALGNL--HFHNDDQRVGAEIIRKALQAPLRQIAHNAGEDGAVIAGKVLESNDYNYGFDAQIGDYKDLVAAGIIDPTKVVRTALQDASSVAGLLITTEAM 521
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STRMU (60 kDa chaperonin OS=Streptococcus mutans GN=groL PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46 Identity = 105/206 (50.97%), Postives = 140/206 (67.96%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG A +VT+ KDST I+ + K+ + R+ +K ++ S +D EKL ER+AKLSGGVAVIKVGAATETEL++ KLRIEDA NAT AA+EEGIV GGG AL+++ + V A+ D +DA G ++V +AL P IA NA K+S TG+NA ++ +M+ AG+IDP KVTR ALQNAASVA ++LTT+A+ Sbjct: 315 LGQAARVTVDKDSTVIVEGSGGKEAVANRVNLIKSQIETATSDFDREKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVAGGGTALINVIEKVAAL-DLTDDA--ATGRNLVLRALEEPVRQIAKNAGYEGSVIIDKLKNSSAGTGFNAANGEWVDMIDAGIIDPVKVTRSALQNAASVASLILTTEAV 517
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_SHEFN (60 kDa chaperonin OS=Shewanella frigidimarina (strain NCIMB 400) GN=groL PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46 Identity = 99/206 (48.06%), Postives = 145/206 (70.39%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LGTA++V I KD+TTII + + +I AR++Q+K+++ ++ S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++ + + ++ + D++ G I +A+ AP IA NA K+ E GYNA D Y +ML+ G++DP KVTR ALQ AAS+AG+++TT+A+ Sbjct: 317 LGTAKRVIITKDNTTIIDGSGDQVQISARVSQIKQQVEDSTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIKDV--EVLNEDQKHGVVIALRAMEAPLRQIATNAGQEASVVANTVKNGEGNFGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAM 520
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_PROA2 (60 kDa chaperonin OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=groL PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46 Identity = 96/206 (46.60%), Postives = 145/206 (70.39%), Query Frame = -2 Query: 199 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAP-ASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 813 LG A +T+ KD+TTI+ D+I+ARI ++K ++ ++ S YD+EKL ER+AKLSGGVAV+ +GA+TE E++++K R+EDA +AT AA++EGIV GGG AL+ + + A E+ D++ G DI+++AL P ++A+ K+SE G+NA T++Y N+++AGV+DP KVTR AL+NAASVAG++LTT+A Sbjct: 317 LGQAASITVDKDNTTIVDGKGQADDIKARIGEIKGQIEKSTSDYDTEKLQERLAKLSGGVAVLNIGASTEVEMKEKKARVEDALHATRAAVQEGIVAGGGVALIRAAKALDATNP--ENEDQKTGVDIIRRALEEPLRQIVANTGTTDGAVVVEKVKNSEGDYGFNARTEEYMNLIEAGVVDPTKVTRTALENAASVAGILLTTEA 520
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_PARL1 (60 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groL PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46 Identity = 99/207 (47.83%), Postives = 146/207 (70.53%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG A++V+I KD TTI+ A K +I+AR+AQ+K+++ +T S YD EKL ER+AKL+GGVAVIKVG ATE E+++RK R++DA NAT AA+EEGIVPGGG AL+ S V + + ++ D + G +I+++AL AP I NA +S+ G++A ++Y +++ AG+IDP KV R ALQ+AAS+AG+++TT+A+ Sbjct: 316 LGKAKRVSITKDDTTIVDGAGKKKDIEARVAQIKRQIEDTTSDYDKEKLQERLAKLAGGVAVIKVGGATEAEVKERKDRVDDALNATRAAVEEGIVPGGGTALLMASKAVGKLVE--DNRDIQAGINIIRRALEAPIRQIVENAGVEGSIVVQKVLESKQANFGFDAQKEEYCDLVAAGIIDPTKVVRTALQDAASIAGLLITTEAM 520
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_MARMS (60 kDa chaperonin OS=Marinomonas sp. (strain MWYL1) GN=groL PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46 Identity = 99/207 (47.83%), Postives = 141/207 (68.12%), Query Frame = -2 Query: 196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816 QLGTA++VT+ K+STTI+ A + I +R+ Q++ E+A + S YD EKL ER+AKL+GGVAVIK+GAATE ++++K R++DA +AT AA+EEG+V GGG ALV + +K E+ D+ +G + +A+ AP I NA K E GYNA T +Y +ML+ G++DPAKVTR ALQ AASVAG+++TT+A+ Sbjct: 316 QLGTAKRVTLTKESTTIVDGAGNAANITSRVEQIRAEIANSSSDYDKEKLQERVAKLAGGVAVIKIGAATELAMKEKKARVDDALHATRAAVEEGVVAGGGVALVRALTKIVDLKG--ENEDQSVGITLALRAMEAPMRQIVINAGAEASVVVDKVKQGEGNFGYNAATGEYGDMLEMGILDPAKVTRSALQAAASVAGLMITTEAM 520
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_FLAJ1 (60 kDa chaperonin OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=groL PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46 Identity = 102/205 (49.76%), Postives = 140/205 (68.29%), Query Frame = -2 Query: 202 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 813 LG A++V+I KD+TTI++ A D I+ R+ Q+K ++ T S YD EKL ER+AKL+GGVAV+ VGAA+E E++++K R++DA +AT AA+EEGIV GGG AL+ A+ D K ++ADE G IV +A+ AP I NA + GYNA TD+Y +ML+AG+IDP KVTR AL+NAASV+GM+LTT+ Sbjct: 317 LGNAKRVSIDKDNTTIVSGAGEADIIKNRVNQIKGQMETTTSDYDKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALLRAK---LALADLKADNADEATGIQIVSRAIEAPLRTIVENAGLEGSVVVAKVAEGSGDFGYNAKTDEYVDMLKAGIIDPKKVTRVALENAASVSGMILTTE 518
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_BRUSU (60 kDa chaperonin OS=Brucella suis GN=groL PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.619e-46 Identity = 101/207 (48.79%), Postives = 142/207 (68.60%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG A+KV+I K++TTI+ A K EI AR+ Q+K+++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIV GGG AL+ S + A K +AD+ G +IV++A+ APA I NA + + T GYN +Y +++ G++DP KV R ALQNAASVAG+++TT+A+ Sbjct: 317 LGRAKKVSISKENTTIVDGAGQKAEIDARVGQIKQQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVAGGGTALLRASTKITA---KGVNADQEAGINIVRRAIQAPARQITTNAGEEASVIVGKILENTSETFGYNTANGEYGDLISLGIVDPVKVVRTALQNAASVAGLLITTEAM 520 The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bpback to top |