CX671659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_PROMA (60 kDa chaperonin 1 OS=Prochlorococcus marinus GN=groL1 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.280e-51 Identity = 110/206 (53.40%), Postives = 146/206 (70.87%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG ARK+TI K+STTI+A+ +K E+ +R+A +K+EL +TDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AA+EEGIV GGG+ L+ L + + ++ L D D+ G DI++KAL APA IA NA G+NA T +YE+++ AG+ID KV R ALQ+A S+A +++TT+ I Sbjct: 315 LGKARKITITKESTTIVANDDTKKEVASRVASIKRELDQTDSDYDKEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGSTLIKLGEELDSLSKSL-DGDQATGVDIIKKALSAPAKQIALNAGENGDVVVSEI--QRLGKGFNAATGQYEDLISAGIIDAVKVIRLALQDAVSIASLLITTEVI 517
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAES (60 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=groL PE=3 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 1.671e-51 Identity = 111/206 (53.88%), Postives = 143/206 (69.42%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LGTA KV + KD TT++ ++ I AR+ Q+K ++ ETDS +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V IK + D G +IV KAL AP IA NA K +E G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+ Sbjct: 315 LGTANKVEVTKDHTTVVDGNGDENNIDARVGQIKAQIEETDSEFDKEKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYQKVSEIK---AEGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAEQ (60 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=groL PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.671e-51 Identity = 111/206 (53.88%), Postives = 143/206 (69.42%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LGTA KV + KD TT++ ++ I AR+ Q+K ++ ETDS +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V IK + D G +IV KAL AP IA NA K +E G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+ Sbjct: 315 LGTANKVEVTKDHTTVVDGNGDENNIDARVGQIKAQIEETDSEFDKEKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYQKVSEIK---AEGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_THAPS (60 kDa chaperonin, chloroplastic OS=Thalassiosira pseudonana GN=groL PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.183e-51 Identity = 104/206 (50.49%), Postives = 141/206 (68.45%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG AR++ + KD+TTI+ D + I+AR QL+K++ ++ Y+ EKL +RIAKLSGG+AVI+VGA TETE++D+KLR+EDA NAT AA+EEGIVPGGGA L HLS+++ DE +GA I+ +A+VAP IA NA ++ E+ GYNA + + NM GV+DPAKVTR LQNA S+A M+LTT+ I Sbjct: 317 LGQARRIIVNKDTTTIVGDGLEIENIKARCEQLRKQVNIAETSYEKEKLQDRIAKLSGGIAVIRVGAVTETEMKDKKLRLEDAINATRAAVEEGIVPGGGATLAHLSENLVTWSKTNLKEDELIGALIISRAIVAPLKRIAENAGINGPVVIGKVQEQEFEIGYNAAKNLFGNMYDEGVVDPAKVTRSGLQNATSIASMILTTECI 522
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_EXIS2 (60 kDa chaperonin OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=groL PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.183e-51 Identity = 110/207 (53.14%), Postives = 141/207 (68.12%), Query Frame = -2 Query: 196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816 QLG A KV + KD+TTI+ D I AR+ ++ ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA NAT AA+EEGIV GGG A +H++ V +I + DE G +IV +AL AP IA NA K GYNA TD+Y +M++ G++DPAKVTR ALQNAASV+ M LTT+A+ Sbjct: 314 QLGRASKVVVSKDNTTIVEGNGHSDSITARVGAIRSQIEETTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTAFIHVTKAVESIL-AVTTGDEATGVNIVLRALEAPLRQIAENAGQEGSVIVERLKHEAQGMGYNAATDEYVDMIETGIVDPAKVTRSALQNAASVSAMFLTTEAV 519
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.850e-51 Identity = 105/207 (50.72%), Postives = 147/207 (71.01%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LGTA KV + K+STTI+ D ++++E+ R+AQ+K + + Y+ EKL ERIAKL+GGVAVI+VGA TETEL+++KLR+EDA NAT AA+EEGIV GGG L+ L+ V AIKD LE+ ++++GA+IV++AL P LIA NA ++ + GYNA T +YE+++ AG+IDP KV RC L++AASVA LT+ + Sbjct: 270 LGTAAKVVLTKESTTIVGDGSTQEEVTKRVAQIKNLIEAAEQDYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRRALCYPLKLIAKNAGVNGSVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVV 476
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_ODOSI (60 kDa chaperonin, chloroplastic OS=Odontella sinensis GN=groL PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.850e-51 Identity = 104/206 (50.49%), Postives = 141/206 (68.45%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG AR++ + KDSTTI+ D ++I+AR QL+K++ D+ Y+ EKL +RIAKLSGG+AVI+VGA TETE++D+KLR+EDA NAT AA+EEGIVPGGGA L HL++++ DE +GA I+ +A+VAP IA NA + E+ GYNA + + NM G++DPAKVTR LQNA S+A M+LTT+ I Sbjct: 317 LGQARRIIVNKDSTTIVGDGLEIEQIKARCEQLRKQVNIADTGYEKEKLQDRIAKLSGGIAVIRVGAVTETEMKDKKLRLEDAINATRAAVEEGIVPGGGATLAHLAENLLTWAKINLKEDELIGAMIISRAIVAPLKRIAENAGINGPVIIEKVQQQEFEIGYNAAKNVFGNMYDEGIVDPAKVTRSGLQNATSIASMILTTECI 522
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_LYSSC (60 kDa chaperonin OS=Lysinibacillus sphaericus (strain C3-41) GN=groL PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.850e-51 Identity = 112/206 (54.37%), Postives = 143/206 (69.42%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG A KV + KD+TTI+ D I+ARI Q++ +LAET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG AL+++ V + + E+ D G IV +AL P IA+NA K E G+NA T ++ NM++AGV+DPAKVTR ALQNAASVA + LTT+A+ Sbjct: 315 LGRAAKVVVTKDNTTIVEGVGGADAIEARIGQIRAQLAETTSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALLNVYAAVEKVSES-EEGDVATGVKIVLRALEEPVRQIANNAGLEGSIIVDRLKREEIGIGFNAATGEWVNMMEAGVVDPAKVTRSALQNAASVAALFLTTEAV 519
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH603_ANAVT (60 kDa chaperonin 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL3 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.850e-51 Identity = 106/207 (51.21%), Postives = 149/207 (71.98%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPA-IKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG AR+ + KD TTI+A+ +++ ++ARI Q+++++ E +S YD EKL +R+AKL+GGVAVIKVGAATETEL+DRKLR+EDA NAT AA+EEGIVPGGG + H++ + K +++D +E G IV +AL AP IA NA ++ + GY+A+ +K+ NM +AG++DPAKVTR ALQNAAS+ GMVLTT+ + Sbjct: 316 LGKARRAIVTKDDTTIVAEG-NEEAVKARIEQIRRQIQEVESSYDKEKLQQRLAKLAGGVAVIKVGAATETELKDRKLRLEDAINATKAAVEEGIVPGGGTTIAHIAPQLEEWAKSQMKD-EELTGTMIVARALYAPLRRIADNAGANGAVIVERVRELPFDEGYDAVANKFVNMFEAGIVDPAKVTRSALQNAASIGGMVLTTEGV 520
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAAR (60 kDa chaperonin OS=Staphylococcus aureus (strain MRSA252) GN=groL PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.723e-51 Identity = 110/206 (53.40%), Postives = 146/206 (70.87%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LGTA KV + KD+TT++ ++ I AR++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V I+ + D G +IV KAL AP IA NA K++E G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+ Sbjct: 315 LGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEVGIVDPTKVTRSALQHAASVAAMFLTTEAV 517 The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bpback to top |