CX671645

Overview
NameCX671645
Unique NameCX671645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.962e-28
Identity = 67/158 (42.41%), Postives = 93/158 (58.86%), Query Frame = -2
Query:  334 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKLSQSEPHRQTGPVTVRKSPMRQQR 807
            GP GD THV+T  +GTHGYAAPEYV TG L  KSDVYSFGVVL E+++GR  +++ K   E+ L+DW K Y +D ++   I+D +L   YP   A + A LA  CL    K RP M  V+  L+++       + S SE +      T   S +R+++
Sbjct:  243 GPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVVERLKKI------IEESDSEDYPMATTTTKESSQVRRRQ 394          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.555e-25
Identity = 61/131 (46.56%), Postives = 82/131 (62.60%), Query Frame = -2
Query:  391 VSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKLSQSE 783
            VSTQV+G+ GY+APE+  +G  T KSDVY+FGVV+LELL+GR  +D ++   EQSLV WA P L D   L +++D  L G YP K+    A +   C+  EP+ RP MSEV+  L RL    +  K   S+
Sbjct:  555 VSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQLVRLVQRASVVKRRSSD 685          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.719e-24
Identity = 63/117 (53.85%), Postives = 77/117 (65.81%), Query Frame = -2
Query:  430 STQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERL 780
            ST+V+GT GY APEY  TG+L AKSDVYSFGVVLLELL+GR  VD      +QSLV WA P LS+  K+ + +D +LGG YP KA    A +A  C+  E   RP MS V+  L+ L
Sbjct:  237 STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSED-KVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPL 352          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.455e-23
Identity = 66/136 (48.53%), Postives = 83/136 (61.03%), Query Frame = -2
Query:  394 TGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKLSQS 801
            T  R H ST+V+GT GY APEY  TG++T KSDVYSFGVVLLELL+GR  VD T    +QSLV WA P LS+  K+ + +D KL   +P KA    A +A  C+  E   RP M+ V+  L+ L   K +   S S
Sbjct:  232 TAARLH-STRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSED-KVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPESTS 365          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.483e-23
Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = -2
Query:  376 DRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKLSQSEPHRQT 795
            D TH+ST++ GT GY APEY   G LT K+DVYSFG+V LE++ GR    +        L+DW +  L +K  L  ++D +LG +Y ++ A T   +A+ C ++EP  RP MSEV+ MLE  +  +   KL ++  HR+T
Sbjct:  778 DSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVE-VLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLEGKKMVE-VEKLEEASVHRET 915          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.242e-23
Identity = 61/117 (52.14%), Postives = 77/117 (65.81%), Query Frame = -2
Query:  430 STQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERL 780
            ST+V+GT GY APEY  TG+L++KSDVYSFGVVLLELL+GR  VD T    +QSLV WA P LS+  K+ + +D +L   YP KA    A +A  C+  E   RP MS V+  L+ L
Sbjct:  232 STRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSED-KVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVVKALQPL 347          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.176e-21
Identity = 54/123 (43.90%), Postives = 79/123 (64.23%), Query Frame = -2
Query:  421 THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAP 789
            +H++T+VMGT GY APEY  TG L  KSD+YSFGV+LLE ++GR  VD  +   E +LV+W K  +   R+   ++D +L  +  + A   A  ++L+C++ E + RPRMS+V  MLE  E P
Sbjct:  339 SHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLK-MMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESDEHP 460          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.967e-20
Identity = 53/118 (44.92%), Postives = 77/118 (65.25%), Query Frame = -2
Query:  448 TGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 801
            +G  + +S Q++  +GY APE+  +G  T +SDVYSFGVV+LELL+GR + D+ +   EQ LV WA P L D   L +++D  L GQYP K+    A +  +C+ +EP+ RP MSEV+
Sbjct:  640 SGSVSQLSGQLLAAYGYGAPEF-DSGIYTWQSDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVRWAIPQLHDIDALGKMVDPSLNGQYPAKSLSHFADIISRCVQSEPEFRPLMSEVV 756          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.382e-20
Identity = 56/129 (43.41%), Postives = 77/129 (59.69%), Query Frame = -2
Query:  373 GYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKLSQS-EPHRQTG 756
            GY+APE   +G+ + KSD+YSFGVV+LELL+GR   D T+   EQSLV WA P L D   L +++D  L G YP K+    A +   C+  EP+ RP MSEV+  L  L    N +K +   +P ++ G
Sbjct:  582 GYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANMSKRTVGVDPSQRAG 710          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.723e-20
Identity = 47/120 (39.17%), Postives = 77/120 (64.17%), Query Frame = -2
Query:  436 DRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 795
            + ++V+T+VMGT GY APEY  TG L  KSD+YSFG++++E+++GR  VD ++   E +LVDW K  + ++R    ++D K+      KA      +AL+C++ +   RP+M  ++ MLE
Sbjct:  308 ESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRS-EEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLE 426          
The following BLAST results are available for this feature:
BLAST of CX671645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
Y5707_ARATH1.962e-2842.41Probable receptor-like protein kinase At5g47070 OS... [more]
SRF8_ARATH1.555e-2546.56Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
Y2706_ARATH1.719e-2453.85Probable receptor-like protein kinase At2g47060 OS... [more]
Y2197_ARATH1.455e-2348.53Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
Y1534_ARATH2.483e-2341.43Probable LRR receptor-like serine/threonine-protei... [more]
PTI1_SOLLC3.242e-2352.14Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2296_ARATH5.176e-2143.90Probable receptor-like protein kinase At2g42960 OS... [more]
SRF3_ARATH1.967e-2044.92Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
SRF6_ARATH4.382e-2043.41Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
Y1154_ARATH5.723e-2039.17Probable serine/threonine-protein kinase At1g01540... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C10-F20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671645 ID=CX671645; Name=CX671645; organism=Citrus sinensis; type=EST; length=811bp
CTTTGGGTCAGCACCACAAGCAGAAAAATCATTTGCTCATTCAAAACGAA
AGGATGTGTAACGACAACAAAAAGAAACATTTATATCTGGGCTATTGATA
CATATACAGCAGGAAAACGACATATCATCAAGAAACAAAAAGGCCTATGA
CAATTTTCAGTACTATTCACTCAAAACTGCATCAGAAGACACATCCATAC
AATATTTATTTTGACAACTGGCAAGAAGGCATTTAAGAAATTTACAAAAA
AGATGCTTCTCGGTTCATCTTACTCGTGGAGATTGCCGGTGTGATGGCAA
TGGCGATGCAGTTGGTGTCATATTCAGAGGAGAACGCTGCTGCCTCATTG
GTGACTTGCGTACTGTAACTGGGCCAGTCTGCCTATGTGGTTCAGACTGG
GAGAGTTTGGCTGAATTTTTGGGAGCTTCAAGTCGCTCTAGCATTGCTAA
AACCTCAGACATCCGAGGCCTAAGTTTAGGTTCGTTATTTAAGCACTGTA
AGGCAAGGGTAGCAGCTGTATGGGCTGCTTTCTGGGGGTACTGGCCTCCC
AACTTGGTGTCCATGATGCGAAATAATTTCCTTTTGTCAGACAAATATGG
TTTTGCCCAGTCTACTAGACTCTGCTCAATACCAACTTTTGTTTTATCTA
CAGCACATCGCCCAGACAATAGTTCAAGCAATACAACTCCGAAGCTGTAG
ACATCACTTTTAGCTGTAAGCCGACCTGTAGCAACATATTCAGGTGCTGC
ATAGCCATGAGTACCCATAACTTGGGTGGAAACATGAGTCCTATCACCAG
TGGGCCCAGCC
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