CX671645

Overview
NameCX671645
Unique NameCX671645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20
Identity = 53/120 (44.17%), Postives = 72/120 (60.00%), Query Frame = -2
Query:  436 DRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 795
            + TH+ST++ GT GY APEY   G LT K+DVYSFGVV LE++SG+   +         L+DWA   L ++  L  ++D  LG  + +K A     +AL C N  P LRP MS V++MLE
Sbjct:  823 ENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAY-VLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLE 941          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20
Identity = 55/117 (47.01%), Postives = 71/117 (60.68%), Query Frame = -2
Query:  406 GYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAK 756
            GY+APE   +G+ + KSDVYSFGVV+LELL+GR   D T+   EQSLV WA P L D   L +++D  L G YP K+    A +   C+  EP+ RP MSEV+  L  L    N +K
Sbjct:  585 GYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANMSK 701          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.275e-19
Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = -2
Query:  436 AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 810
            AGP+ D THVST V G+ GY  PEY    +LT KSDVYSFGVVL E +  R  ++ T    + +L +WA  +   +R L  I+D+ L G Y  ++      +A +CL +E K RP M EVL  LE
Sbjct:  668 AGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSW-QKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLE 791          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.275e-19
Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = -2
Query:  436 THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 789
            THV+T V GT G+ APEY++TG+ + K+DV+ +GV+LLEL++G+ A D  ++  +    L+DW K  L +K KL  ++D  L G Y  +       +AL C  + P  RP+MSEV+ MLE
Sbjct:  446 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 564          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.665e-19
Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = -2
Query:  436 THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 789
            TH+ST++ GT GY APEY   G LT K+DVYSFGVV LE++SG+   +         L+DWA   L ++  L  ++D  L   Y ++ A     +AL C N  P LRP MS+V++++E
Sbjct:  835 THISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAY-VLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIE 951          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.175e-19
Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = -2
Query:  436 DRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 795
            + TH+ST++ GT GY APEY   G LT K+DVYSFGVV LE++SG+   +         L+DWA   L ++  L  ++D  LG  + +K A     +AL C N  P LRP MS V++ML+
Sbjct:  821 ENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAY-VLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQ 939          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.710e-19
Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = -2
Query:  448 TGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVL 801
            +G  + +S Q++  +GY APE+   G  T K DVYSFGVV+LELL+GR + DK +   EQ LV WA P L D   L +++D  L G YP K+    A +  +C+ +EP+ RP MSEV+
Sbjct:  633 SGAVSQLSGQLLAAYGYGAPEF-EYGIYTMKCDVYSFGVVMLELLTGRKSYDKKRDRGEQFLVRWAIPQLHDIDALAKMVDPSLKGDYPAKSLSHFADVISRCVQSEPEYRPLMSEVV 749          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.845e-19
Identity = 56/132 (42.42%), Postives = 79/132 (59.85%), Query Frame = -2
Query:  409 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSA 804
            P    ++VS +V GT GY  PEY  T +L+ KSDV+SFGVVLLE++SGR  ++  +  IE SLV+WAKPY+    K+  I+D  + G Y  +A      +ALQCL      RP M +++  LE     +N+A
Sbjct:  748 PQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIR-ASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNA 878          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.328e-19
Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = -2
Query:  406 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAK 804
            P G  +HVST + GT GY  PEY  T RL+ KSDVYSFG+VLLE+++ +  +D+ +   +  +  W    L+    + +IMD KL G Y  ++A  A  LA+ C +     RP MS V+  L+     +NS +
Sbjct:  731 PVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVIDRNR--RKSHITQWVGSELNG-GDIAKIMDLKLNGDYDSRSAWRALELAMSCADPTSARRPTMSHVVIELKECLVSENSRR 860          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.328e-19
Identity = 55/132 (41.67%), Postives = 79/132 (59.85%), Query Frame = -2
Query:  409 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSA 804
            P    ++VS +V GT GY  PEY  T +L+ KSDV+SFGVVLLE++SGR  ++  +  +E SLV+WAKPY+    K+  I+D  + G Y  +A      +ALQCL      RP M +++  LE     +N+A
Sbjct:  747 PQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIR-ASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNA 877          
The following BLAST results are available for this feature:
BLAST of CX671645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
Y5343_ARATH7.475e-2044.17Probable LRR receptor-like serine/threonine-protei... [more]
SRF7_ARATH7.475e-2047.01Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
Y1357_ARATH1.275e-1944.00Probable receptor-like protein kinase At1g30570 OS... [more]
BAK1_ARATH1.275e-1942.50BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y1765_ARATH1.665e-1942.37Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH2.175e-1943.33Probable LRR receptor-like serine/threonine-protei... [more]
SRF1_ARATH3.710e-1944.92Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
NORK_MEDTR4.845e-1942.42Nodulation receptor kinase OS=Medicago truncatula ... [more]
Y5596_ARATH6.328e-1938.35Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA6.328e-1941.67Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C10-F20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671645 ID=CX671645; Name=CX671645; organism=Citrus sinensis; type=EST; length=811bp
CTTTGGGTCAGCACCACAAGCAGAAAAATCATTTGCTCATTCAAAACGAA
AGGATGTGTAACGACAACAAAAAGAAACATTTATATCTGGGCTATTGATA
CATATACAGCAGGAAAACGACATATCATCAAGAAACAAAAAGGCCTATGA
CAATTTTCAGTACTATTCACTCAAAACTGCATCAGAAGACACATCCATAC
AATATTTATTTTGACAACTGGCAAGAAGGCATTTAAGAAATTTACAAAAA
AGATGCTTCTCGGTTCATCTTACTCGTGGAGATTGCCGGTGTGATGGCAA
TGGCGATGCAGTTGGTGTCATATTCAGAGGAGAACGCTGCTGCCTCATTG
GTGACTTGCGTACTGTAACTGGGCCAGTCTGCCTATGTGGTTCAGACTGG
GAGAGTTTGGCTGAATTTTTGGGAGCTTCAAGTCGCTCTAGCATTGCTAA
AACCTCAGACATCCGAGGCCTAAGTTTAGGTTCGTTATTTAAGCACTGTA
AGGCAAGGGTAGCAGCTGTATGGGCTGCTTTCTGGGGGTACTGGCCTCCC
AACTTGGTGTCCATGATGCGAAATAATTTCCTTTTGTCAGACAAATATGG
TTTTGCCCAGTCTACTAGACTCTGCTCAATACCAACTTTTGTTTTATCTA
CAGCACATCGCCCAGACAATAGTTCAAGCAATACAACTCCGAAGCTGTAG
ACATCACTTTTAGCTGTAAGCCGACCTGTAGCAACATATTCAGGTGCTGC
ATAGCCATGAGTACCCATAACTTGGGTGGAAACATGAGTCCTATCACCAG
TGGGCCCAGCC
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