CX671645

Overview
NameCX671645
Unique NameCX671645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18
Identity = 49/121 (40.50%), Postives = 80/121 (66.12%), Query Frame = -2
Query:  436 RTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 792
            RT+V+TQV GT G+ APEY++TG+ + ++DV+ +G++LLEL++G+ A+D +++  E    L+D  K  L  +++L  I+D  L G+Y ++       +AL C    P+ RP MSEV+ MLE
Sbjct:  446 RTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK-LEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLE 565          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.559e-17
Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = -2
Query:  430 THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLV-DWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERL 789
            +HV+T V GT G+ APEY++TG+ + K+DV+ FGV++LEL++G   +D+    + + ++  W +   ++KR    ++D  L G++          LAL C    P LRPRMS+VL +LE L
Sbjct:  456 SHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKR-FAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEGL 575          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.559e-17
Identity = 50/142 (35.21%), Postives = 83/142 (58.45%), Query Frame = -2
Query:  373 GDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKLSQSEPHRQTG 798
            GD++ VST V GT GY  PEY  T  L+ KSDVYSFG++LLE+++ +  +D+T+     ++ +W   ++  K    +I+D KL G Y   +   A  +A+ C N     RP MS+V+  L+   A +N+ ++S++  +  +G
Sbjct:  720 GDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRE--NPNIAEWV-TFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINLKECLASENT-RISRNNQNMDSG 857          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.659e-17
Identity = 52/135 (38.52%), Postives = 83/135 (61.48%), Query Frame = -2
Query:  394 DRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERL-EAPKNSAKLSQS 795
            ++TH+ST+V GT GY APEY   G LT K+DVYSFGV++LE+++G    +    G    L+++A   + +   L +++D +L  +  +K A     +AL C +  P  RP MSEV+AMLE L   P+++  +S++
Sbjct:  835 EKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECV-ESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLEGLYPVPESTPGVSRN 968          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.472e-17
Identity = 54/138 (39.13%), Postives = 72/138 (52.17%), Query Frame = -2
Query:  391 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKLSQSE 804
            P     HVST V GT GY  PEY  T  L+ KSDVYSFGVVLLE+++ +  +DKT+      + DW   ++  K  +  I+D KL G Y    A     LAL C+N     RP M+ V+  L    A +N+ +    E
Sbjct:  734 PIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRE--RPHINDWV-GFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVMELNDCVALENARRQGSEE 868          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.535e-17
Identity = 45/124 (36.29%), Postives = 76/124 (61.29%), Query Frame = -2
Query:  433 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLER 804
            P  D +HV T VMGT GY  PEY  T +L  KSDVYSFG+VLLEL++G+ ++ KT  G + ++V + +P+L     +  ++D +L G +   +A     +A+ C+ +    RP  +++++ L++
Sbjct:  730 PEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLK-MGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQ 852          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = -2
Query:  439 RTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAML 792
            +TH+ST+V GT GY APEY   G LT K+DVY+FGVV LEL+SGR   D+     ++ L++WA   L +K +   ++D KL   +  + A     +AL C      LRP MS V+AML
Sbjct:  847 KTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAW-NLHEKSRDIELIDDKL-TDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAML 962          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 53/130 (40.77%), Postives = 76/130 (58.46%), Query Frame = -2
Query:  397 TQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATL--ALQCLNNEPKLRPRMSEVLAMLERLE-APKNSAKLSQ 777
            ++V G++GY APEY  T  +T KSDVYS+GVVLLE+LSGR AV+  ++G    +V+W K  +        ++D KL G   Q       TL  A+ C+N  P  RP M EV+ +L  ++ +P+   K SQ
Sbjct:  936 SRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVE-PQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLLMEVKCSPEEWGKTSQ 1064          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 51/131 (38.93%), Postives = 73/131 (55.73%), Query Frame = -2
Query:  412 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNS 804
            P    THVST V GT GY  PEY  T  L  KSDVYSFG+VLLE+++ +  +++++   +  + +W    L+ K  +  IMD KL G Y   +   A  LA+ CLN     RP MS+V+  L    + +N+
Sbjct:  743 PIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSRE--KPHIAEWVGLMLT-KGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVVIELNECLSYENA 870          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.923e-17
Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  427 THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLE 789
            TH+ST+V GT GY APEY   G+LT KSDVYSFGVVLLELLS R A+   + G   S+ DWA   + + + L  +++  +  + P +       +A+ C + +   RP M +V+ MLE  E
Sbjct:  442 THMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTL-DVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKMLESNE 561          
The following BLAST results are available for this feature:
BLAST of CX671645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
Y5129_ARATH9.137e-1840.50Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH1.559e-1738.02Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH1.559e-1735.21Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH2.659e-1738.52Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH3.472e-1739.13Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH4.535e-1736.29Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH5.923e-1744.07Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH5.923e-1740.77Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH5.923e-1738.93Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
RKF3_ARATH5.923e-1742.15Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C10-F20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671645 ID=CX671645; Name=CX671645; organism=Citrus sinensis; type=EST; length=811bp
CTTTGGGTCAGCACCACAAGCAGAAAAATCATTTGCTCATTCAAAACGAA
AGGATGTGTAACGACAACAAAAAGAAACATTTATATCTGGGCTATTGATA
CATATACAGCAGGAAAACGACATATCATCAAGAAACAAAAAGGCCTATGA
CAATTTTCAGTACTATTCACTCAAAACTGCATCAGAAGACACATCCATAC
AATATTTATTTTGACAACTGGCAAGAAGGCATTTAAGAAATTTACAAAAA
AGATGCTTCTCGGTTCATCTTACTCGTGGAGATTGCCGGTGTGATGGCAA
TGGCGATGCAGTTGGTGTCATATTCAGAGGAGAACGCTGCTGCCTCATTG
GTGACTTGCGTACTGTAACTGGGCCAGTCTGCCTATGTGGTTCAGACTGG
GAGAGTTTGGCTGAATTTTTGGGAGCTTCAAGTCGCTCTAGCATTGCTAA
AACCTCAGACATCCGAGGCCTAAGTTTAGGTTCGTTATTTAAGCACTGTA
AGGCAAGGGTAGCAGCTGTATGGGCTGCTTTCTGGGGGTACTGGCCTCCC
AACTTGGTGTCCATGATGCGAAATAATTTCCTTTTGTCAGACAAATATGG
TTTTGCCCAGTCTACTAGACTCTGCTCAATACCAACTTTTGTTTTATCTA
CAGCACATCGCCCAGACAATAGTTCAAGCAATACAACTCCGAAGCTGTAG
ACATCACTTTTAGCTGTAAGCCGACCTGTAGCAACATATTCAGGTGCTGC
ATAGCCATGAGTACCCATAACTTGGGTGGAAACATGAGTCCTATCACCAG
TGGGCCCAGCC
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