CX671645

Overview
NameCX671645
Unique NameCX671645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.488e-15
Identity = 52/124 (41.94%), Postives = 67/124 (54.03%), Query Frame = -2
Query:  436 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 807
            GP  D+THVST V G+ GY  PEY    +LT KSDVYSFGVVL E+L  R  +D T      +L +WA  +   K +L +I+D  L G     +    A    +CL +    RP M +VL  LE
Sbjct:  634 GPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKW-QKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKCLADYGVDRPSMGDVLWNLE 756          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15
Identity = 45/114 (39.47%), Postives = 71/114 (62.28%), Query Frame = -2
Query:  430 GTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ--CLNNEPKLRPRMSEVLAMLERL 765
            G++GY APE+ +  R+T KSDVYS+GVVLLE+L+G+  +D    G    LV W + +L++K+   R++D +L G+          TLA+   C++N+   RP M +V+AML  +
Sbjct:  929 GSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPG-GAHLVKWVRDHLAEKKDPSRLLDPRLDGRTDSIMHEMLQTLAVAFLCVSNKANERPLMKDVVAMLTEI 1041          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15
Identity = 50/134 (37.31%), Postives = 74/134 (55.22%), Query Frame = -2
Query:  388 TQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAM----LERLEAPKNSAKLSQSEP 777
            T V GT GY  PEY  T  L+ KSDVYSFGVVLLE++SG+  +D ++     ++V+W   ++ +   +  I+D  L   Y   +A     LA+ C+N   K RP MS+V+ +    LE  E  + S ++  S P
Sbjct:  718 TVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRENC--NIVEWTS-FILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMSQVVHVLNECLETCEKWRKSQEVDLSSP 848          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.244e-15
Identity = 48/123 (39.02%), Postives = 69/123 (56.10%), Query Frame = -2
Query:  436 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 804
            P G+  +VST V GT GY  PEY  T  LT KSD+YSFG+VLLE++S R  + +++   +  +V+W   ++  K  L  IMD  L   Y   +   A  LA+ C++     RP MS V+  L+
Sbjct:  728 PIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSRE--KPHIVEWVS-FMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRPNMSRVVNELK 847          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.244e-15
Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = -2
Query:  430 THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATL---ALQCLNNEPKLRPRMSEVLAMLERL 789
            +HVST + GT GY APEY  T + T + DVYS+GV+ +EL +GR AVD    G E+ LV+WA+  ++      +     L G  P   A     L    ++C  + P+ RP M EVLAML ++
Sbjct:  971 SHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVD----GGEECLVEWARRVMTGNMTA-KGSPITLSGTKPGNGAEQMTELLKIGVKCTADHPQARPNMKEVLAMLVKI 1088          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.244e-15
Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = -2
Query:  412 TGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIE--QSLVDWAKPY--LSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERL-EAPKNS 801
            T D+TH +T + GT GY  PEY  + + T KSDVYSFGV+L EL++G    DK  + ++  Q ++  A+ +     +R+L  IMD ++      +     A LA++CL++  + RP M EV   LER+  +P++S
Sbjct:  596 TIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITG----DKPVIMVQNTQEIIALAEHFRVAMKERRLSDIMDARIRDDSKPEQVMAVANLAMKCLSSRGRNRPNMREVFTELERICTSPEDS 726          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.543e-15
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = -2
Query:  430 DRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMD----TKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERL 795
            ++ HV+TQV GT GY  PEY  T +LT KSDVY FGVV+LELL+G+  +D+    +++      K  +   R L+ + +    T +      K       +ALQC+  E   RP MSEV+  LE +
Sbjct:  787 EKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKE-----VKKKMDKSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELESI 907          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.543e-15
Identity = 50/124 (40.32%), Postives = 66/124 (53.23%), Query Frame = -2
Query:  436 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 807
            GP  D+THVST V G+ GY  PEY    +LT KSDVYSFGVV+ E+L  R  +D T      +L +WA  +   K +L  I+D  L G+    +         +CL +    RP M +VL  LE
Sbjct:  631 GPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKW-QKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLE 753          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.543e-15
Identity = 57/149 (38.26%), Postives = 77/149 (51.68%), Query Frame = -2
Query:  364 AGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKLSQSEPHRQTGPVT 810
            +GP  D THVST V G+ GY  PEY    +LT KSDVYSFGVVL E+L  R AVD   V  + +L +WA  +   K  L +I+D  +  +    +    A  A +C  +    RP + +VL  LE +   + S  L  + P    G VT
Sbjct:  637 SGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNLAEWAIEW-QRKGMLDQIVDPNIADEIKPCSLKKFAETAEKCCADYGVDRPTIGDVLWNLEHVLQLQESGPL--NIPEEDYGDVT 782          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.543e-15
Identity = 53/124 (42.74%), Postives = 67/124 (54.03%), Query Frame = -2
Query:  436 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 807
            GP    T +S    GT GY  PEY     LT KSDVYSFGVVLLE+LSGR A+D      E ++V+WA P L     +F I+D  L      +A    A++A +C+    K RP M +V   LE
Sbjct:  659 GPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFE--EGNIVEWAVP-LIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALE 779          
The following BLAST results are available for this feature:
BLAST of CX671645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
HERK_ARATH2.488e-1541.94Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y4265_ARATH3.250e-1539.47Probable LRR receptor-like serine/threonine-protei... [more]
Y1755_ARATH3.250e-1537.31Probable LRR receptor-like serine/threonine-protei... [more]
Y2899_ARATH4.244e-1539.02Probable leucine-rich repeat receptor-like protein... [more]
Y1743_ARATH4.244e-1539.84Probable LRR receptor-like serine/threonine-protei... [more]
WAKLM_ARATH4.244e-1537.04Wall-associated receptor kinase-like 17 OS=Arabido... [more]
Y5977_ARATH5.543e-1538.10Probable leucine-rich repeat receptor-like protein... [more]
Y5597_ARATH5.543e-1540.32Probable receptor-like protein kinase At5g59700 OS... [more]
Y5241_ARATH5.543e-1538.26Probable receptor-like protein kinase At5g24010 OS... [more]
CRI4_MAIZE5.543e-1542.74Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C10-F20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671645 ID=CX671645; Name=CX671645; organism=Citrus sinensis; type=EST; length=811bp
CTTTGGGTCAGCACCACAAGCAGAAAAATCATTTGCTCATTCAAAACGAA
AGGATGTGTAACGACAACAAAAAGAAACATTTATATCTGGGCTATTGATA
CATATACAGCAGGAAAACGACATATCATCAAGAAACAAAAAGGCCTATGA
CAATTTTCAGTACTATTCACTCAAAACTGCATCAGAAGACACATCCATAC
AATATTTATTTTGACAACTGGCAAGAAGGCATTTAAGAAATTTACAAAAA
AGATGCTTCTCGGTTCATCTTACTCGTGGAGATTGCCGGTGTGATGGCAA
TGGCGATGCAGTTGGTGTCATATTCAGAGGAGAACGCTGCTGCCTCATTG
GTGACTTGCGTACTGTAACTGGGCCAGTCTGCCTATGTGGTTCAGACTGG
GAGAGTTTGGCTGAATTTTTGGGAGCTTCAAGTCGCTCTAGCATTGCTAA
AACCTCAGACATCCGAGGCCTAAGTTTAGGTTCGTTATTTAAGCACTGTA
AGGCAAGGGTAGCAGCTGTATGGGCTGCTTTCTGGGGGTACTGGCCTCCC
AACTTGGTGTCCATGATGCGAAATAATTTCCTTTTGTCAGACAAATATGG
TTTTGCCCAGTCTACTAGACTCTGCTCAATACCAACTTTTGTTTTATCTA
CAGCACATCGCCCAGACAATAGTTCAAGCAATACAACTCCGAAGCTGTAG
ACATCACTTTTAGCTGTAAGCCGACCTGTAGCAACATATTCAGGTGCTGC
ATAGCCATGAGTACCCATAACTTGGGTGGAAACATGAGTCCTATCACCAG
TGGGCCCAGCC
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