FC871775

Overview
NameFC871775
Unique NameFC871775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.203e-49
Identity = 95/173 (54.91%), Postives = 134/173 (77.46%), Query Frame = 1
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 519
            LVQ YIGEG+R+VRELF +A++ AP+IIF+DEID++G++R E+ + +GD EVQRT+++LL  +DGFE    +K++ ATNRIDILD+ALLRPGR DR IE P P+EE RL ILK+H+R + +   ++L +IA    G +GA+L+A+C EAGM+A+R  R  +T+EDF  A+ KV
Sbjct:  248 LVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANT-SGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKV 419          
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 4.203e-49
Identity = 97/177 (54.80%), Postives = 134/177 (75.71%), Query Frame = 1
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 531
            LVQ +IG+G+++VR+ F++A+E +P IIF+DEID+IG+ R +S   +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R  IL+IHSR+MN+   ++ +++A   +  +GA+LKAVC EAGM ALR     V  EDF   + +V  K+
Sbjct:  240 LVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 415          
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.203e-49
Identity = 97/183 (53.01%), Postives = 133/183 (72.68%), Query Frame = 1
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMS 549
            ++  YIGE +R++RE+F  AREH P IIFMDEID+IG  R   G+ + D E+QRT++ELLNQLDGF+   K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+SR++ILKIH+  +     ID + I +   G +GA+L+ +CTEAGMFA+R  R +V  EDF  AV K+ + +  ++ S
Sbjct:  209 IIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSS 390          
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.203e-49
Identity = 100/175 (57.14%), Postives = 130/175 (74.29%), Query Frame = 1
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 525
            LVQ Y+GEG+RMVR+LF MAR     IIF DE+D+IG AR + G+G GD+EVQRTMLEL+NQLDGF+    IKVLMATNR D LD ALLRPGR+DRK+EF  P+ E R  I  IH++ M+  R I  + +A     ++GA++++VCTEAGMFA+R RR  V+++DF  A+ KV+K
Sbjct:  240 LVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKVIK 413          
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.489e-49
Identity = 99/179 (55.31%), Postives = 135/179 (75.42%), Query Frame = 1
Query:    4 VQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 540
            V+ YIGEG+R+VR +F +A+E +PSIIF+DEID++ + R++S S +GD EVQRT+++LL +LDGFE+   + ++ ATNR DILD ALLRPGR DR IE P PNE+ R +ILKIH+  M L   +D++ +A   +GASGA+LKA+CTEAGMFA+R+ R  VT  DF  AV K+M  E E+
Sbjct:  222 VRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKS-STSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIMGVEKEE 399          
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS6A_ENCCU (26S protease regulatory subunit 6A OS=Encephalitozoon cuniculi GN=RPT5 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.169e-49
Identity = 95/180 (52.78%), Postives = 133/180 (73.89%), Query Frame = 1
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 540
            LVQ YIG+G+R+VR+ F +A+E  P+IIF+DEID+IG+ R +S    GD EVQRTMLELLNQLDGF +S ++K++ ATNR+DILD ALLR GR+DRKIEFP PN   R  IL+IH+R+M++   ++  ++A    G +GA+ KAVC EAGM ALR+ +  ++Q DF   + +V+ ++  K
Sbjct:  218 LVQMYIGDGARLVRDAFALAKERKPTIIFIDEIDAIGAKRSDSDQ-TGDREVQRTMLELLNQLDGFSSSEEVKIIAATNRVDILDPALLRSGRLDRKIEFPLPNTLGRKRILQIHARKMSVRDDVNFDELARSTEGFNGAQCKAVCVEAGMAALRKEKTEISQNDFMDGIQEVLSRKKSK 396          
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.363e-49
Identity = 95/187 (50.80%), Postives = 141/187 (75.40%), Query Frame = 1
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 561
            LV+ +IGEG+++VR++F +A+E +P IIF+DEID++ S R ES +G GD EVQRT+++LL ++DGF++   +K++ ATNR DILD A+LRPGR DR IE   P+E+ RLDILKIH+ +MNL +G+DL+++A+      GA+LKAVCTEAGMFA+RE R  +  +DF  A+ K+  K+ + +  + +L
Sbjct:  218 LVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTG-GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGKKEKCSYDMPQL 402          
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.363e-49
Identity = 98/180 (54.44%), Postives = 136/180 (75.56%), Query Frame = 1
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 537
            L+Q Y+G+G R+VR+LF  A EH+PSI+F+DEID+IG+ R ++ SG  + E+QRTMLELLNQLDGF+ S + IKV+MATNRI  LD AL+RPGRIDRKI F NP+E ++  I  IH+ +MNL   ++L+++ +  +  SGAE+KA+ +EAG+ ALRERR+ V  +DF  A  KV+K + E
Sbjct:  261 LIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSG-AEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKDE 439          
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.223e-48
Identity = 103/175 (58.86%), Postives = 129/175 (73.71%), Query Frame = 1
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 525
            LVQ Y+GEG+RMVRELF MAR     IIF DEID+IG AR + G+G GD+EVQRTMLEL+ QLDGF+    IKVL ATNR + LD+AL+RPGRIDRK+EF  P+ E R  IL+IH++ M + + I  + IA      +GAEL++VCTEAGMFA+R RR   T++DF  AV KV+K
Sbjct:  249 LVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVK 422          
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.223e-48
Identity = 96/177 (54.24%), Postives = 133/177 (75.14%), Query Frame = 1
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 531
            LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S    GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R  I++IHSR+MN+   ++ +++A   +  +GA+ KAVC EAGM ALR     +T ED    + +V  K+
Sbjct:  259 LVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEAGMIALRRGATELTHEDHMEGILEVQAKK 434          
The following BLAST results are available for this feature:
BLAST of FC871775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
PSMR_METB64.203e-4954.91Proteasome-activating nucleotidase OS=Methanoregul... [more]
PS6AB_ARATH4.203e-4954.8026S protease regulatory subunit 6A homolog B OS=Ar... [more]
PS10B_ARATH4.203e-4953.0126S protease regulatory subunit S10B homolog B OS=... [more]
PRS7_DICDI4.203e-4957.1426S protease regulatory subunit 7 OS=Dictyostelium... [more]
PSMR_METTH5.489e-4955.31Proteasome-activating nucleotidase OS=Methanobacte... [more]
PRS6A_ENCCU7.169e-4952.7826S protease regulatory subunit 6A OS=Encephalitoz... [more]
PSMR_METM59.363e-4950.80Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS4_SCHPO9.363e-4954.4426S protease regulatory subunit 4 homolog OS=Schiz... [more]
PRS7_SCHPO1.223e-4858.8626S protease regulatory subunit 7 homolog OS=Schiz... [more]
PRS6A_MOUSE1.223e-4854.2426S protease regulatory subunit 6A OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3BE05FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3BE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871775 ID=FC871775; Name=FC871775; organism=Citrus sinensis; type=EST; length=782bp
TTAGTCCAGAACTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTTT
TGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATTG
ACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAGT
GAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTGA
AGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATTC
TCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATTT
CCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAAG
AAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAGA
TGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGGT
ATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTGA
GATGGCAGTGGCCAAGGTCATGAAGAAAGAAACAGAGAAGAACATGTCCT
TGCGGAAGTTGTGGAAGTAATCATTTCCATGTGCTGTGCTGTGTATTTGC
TTATTTTCTGAGCAAGATTCAAGTAGTCCTTAACGGCACTCACTCGTGTT
CTGGGACATTTGCACGATAGGCCCTTTTAGCCTGACTGTTGTCTTTTCTT
GCGCTCTAGCCTCTTATGATAAACAAATTTGCAATCTATTTTATCTAAAT
TTAAATTCGCATGCAAAAAAAAAAAAAAAAAA
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