CX671641

Overview
NameCX671641
Unique NameCX671641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 8.551e-70
Identity = 126/204 (61.76%), Postives = 148/204 (72.55%), Query Frame = -3
Query:  244 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 855
            HQAVALRVG+D +  Y+C++  YQDTLYVHSNRQF+ +C I GTVDFIFGNAA VLQ C I AR+P + QKN +TAQ R DPNQNTGI I +C +    DL A KG+ PTYLGRPWK YSR V M + + D I+P GW EW+G FALDTL Y EY+N G G+   +RV+W GY+VITS TEA  FT  QFI G  WL STG  F
Sbjct:  380 HQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPF 583          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.249e-69
Identity = 128/208 (61.54%), Postives = 146/208 (70.19%), Query Frame = -3
Query:  229 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGLS 852
            QAVALRV +D +  YRC+V GYQDTLY HS RQFYR+C+IYGT+DFIFGN A VLQ C IY R P+ +QK TITAQ RK PNQNTG  I +  + A           PTYLGRPWKLYSR VYM TYM   +QPRGWLEW G+FALDTL+YGEY N GPG     RV+WPGY ++   T A  FTV  FI G  WLP+TGV F  GL+
Sbjct:  345 QAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQ---------PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRT-ALSFTVGSFIDGRRWLPATGVTFTAGLA 542          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.543e-69
Identity = 125/208 (60.10%), Postives = 152/208 (73.08%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVAL VG+D +  YRC+++ YQDTLYVHSNRQF+ +C + GTVDFIFGN A V Q C I+AR+P + QKN +TAQ R DPNQNTGI I  C + A  DL+  + S PTYLGRPWK YSR V M + + D IQP GW EWNG+FALDTL+YGEY N+G G+    RV+W G++VITS+TEA  +T  +FI G SWL STG  F  GL
Sbjct:  376 HQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 9.454e-69
Identity = 124/210 (59.05%), Postives = 151/210 (71.90%), Query Frame = -3
Query:  226 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGLSV 855
            HQAVALR  +D +V +RC + GYQDTLY H+ RQFYREC I GTVDFIFG+  VV Q C I A++ +  QKNTITAQ RKD NQ +G SI   ++ A  DL     +  TYLGRPWKLYSR V++   M D ++P GWLEWN DFALDTL+YGE+MN GPGS +  RV+WPGY V  ++ +A+ FTVSQFI G+ WLPSTGV F  GL +
Sbjct:  316 HQAVALRSDSDLSVFFRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGLYI 525          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.751e-68
Identity = 126/208 (60.58%), Postives = 150/208 (72.12%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVALRVG+D +  YRC+++ YQD+LYVHSNRQF+  C I GTVDFIFGNAAVVLQ C I+AR+P + QKN +TAQ R DPNQNTGI I    + A  DLQ  + S PTYLGRPWK YSR V M + + + I P GW  W+G+FALDTLYYGEY N+G G+A   RV W G++VITS+TEA  FT   FI G SWL +T   F  GL
Sbjct:  112 HQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.751e-68
Identity = 120/208 (57.69%), Postives = 150/208 (72.12%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVALRV +D ++ YRC+  GYQDTL+ HS RQFYR+  IYGT+DFIFG+AA V Q C I+ R+PM  Q N ITAQ R DP+ N+GISI    + AAP+ +A KG   +YLGRPWK YSR V++ T + + I PRGW EW+G +AL TLYYGE+MN+G G+  G RV WPG+ V+    EAS FTVS+FI G SW+P TGV F  G+
Sbjct:  312 HQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIPITGVPFSAGV 519          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.041e-67
Identity = 122/203 (60.10%), Postives = 147/203 (72.41%), Query Frame = -3
Query:  244 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 852
            QAVA R G+DH+  YRC   GYQDTLYVHS +QFYRECDIYGT+DFIFGNAAVV Q  ++YARKP    K   TAQ+R   +Q TGISI +C + AAPDL   K +   YLGRPW+ YSR V + +++ D I P GWLE   DFAL+TLYYGEYMN GPG+ +  RV WPG+R I + TEA++FTV  FI GS+WL STG+ F
Sbjct:  326 QAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPF 528          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 3.041e-67
Identity = 120/204 (58.82%), Postives = 145/204 (71.08%), Query Frame = -3
Query:  244 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 855
            HQAVALRV AD  V+ RC +  YQDTLY H+ RQFYR+  I GTVDFIFGN+AVV Q C I AR P A QKN +TAQ R+D NQNT ISI  C + A+ DL   KGS+ T+LGRPWKLYSR V M +++ +HI P GW  W+G+FAL TLYYGEY N+GPG+    RV W G++VI  + EA +FTV++ I G  WL  TGV F
Sbjct:  350 HQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTF 553          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.855e-65
Identity = 115/204 (56.37%), Postives = 149/204 (73.04%), Query Frame = -3
Query:  244 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 855
            HQAVALR  +D +  YRC+   YQDT+YVHS++QFYRECDIYGTVDFIFG+A+VV Q C++YAR+P   QK   TAQ R++  + TGISI    + AAPDL   + +   YLGRPW+LYSR V M +++ D + P GWL+W  DFAL+TLYYGEYMN GPGS + +RV+WPG++ I +  EAS+F+V  FI G+ WL ST + F
Sbjct:  311 HQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPF 514          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.282e-65
Identity = 123/207 (59.42%), Postives = 147/207 (71.01%), Query Frame = -3
Query:  232 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 852
            QAVALRVGAD +VV+RC+V GYQD+LY HS RQFYRE DI GTVDFIFGN+AVV Q C I ARKP+  Q+N +TAQ R +P QNTGI+I +C + A            TYLGRPWK YSR V M +++G  I P GW  W+G F L +L+YGEY NSGPGS+V  RV+W G     + TEA KFTV+ FI G+ WLPSTGV+F  GL
Sbjct:  319 QAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITA---------ESMTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516          
The following BLAST results are available for this feature:
BLAST of CX671641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME2_ARATH8.551e-7061.76Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME22_ARATH3.249e-6961.54Putative pectinesterase/pectinesterase inhibitor 2... [more]
PMEU1_SOLLC5.543e-6960.10Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME44_ARATH9.454e-6959.05Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME_DAUCA2.751e-6860.58Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME36_ARATH2.751e-6857.69Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME39_ARATH3.041e-6760.10Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME18_ARATH3.041e-6758.82Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME40_ARATH4.855e-6556.37Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME16_ARATH8.282e-6559.42Probable pectinesterase/pectinesterase inhibitor 1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12C08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C08-F16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671641 ID=CX671641; Name=CX671641; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTAAAGACCGTCACAAATATTATTACTTATTACAACATCAAGACG
AAAAAAATGAAACCAGAAAATTATACAATTGCGAAAGAAATATTTAGAAT
TTAACCTCCCCGTGTGTGTGTGTGCATGCAGTAAGTAAAATTCCATTTGA
TCCTTCCAACACTCATGAGACCCACCTATATATAATAAGTATACGTACTA
AAAAGTTAAATTAAAATTCACTTTAAACCGAAAGCCCACCCAAGAAAGCC
ACCCCAGTCGACGGCAGCCACGACGACCCGTAGATAAACTGCGACACAGT
GAATTTACTTGCCTCCGTCGCCGACGTTATAACCCGGTAACCCGGCCACC
TCACCCGGTGCCCCACGGCCGAACCCGGGCCGGAGTTCATGTACTCGCCG
TAGTATAAAGTATCCAGTGCAAAGTCTCCATTCCATTCAAGCCAGCCTCT
GGGTTGGATGTGGTCACCCATGTACGTTAACATGTACACAACCCTCGAGT
AGAGCTTCCACGGCCGGCCTAGGTACGTGGGGATGCTGCCTTTCGAGGCC
TGAAGATCGGGGGCGGCGTAGAGGCTGCAGTCGTGGATTGAGATGCCCGT
GTTCTGATTAGGGTCTTTCCTGTTCTGCGCCGTGATGGTGTTCTTCTGCA
TGGCCATCGGCTTGCGAGCGTAGATGGCGCACTTCTGTAAGACCACGGCG
GCGTTCCCGAAGATGAAGTCCACGGTGCCGTAGATGTCGCACTCGCGGTA
GAACTGCCGGTTTGAGTGCACGTAGAGGGTGTCTTGGTAACCGATTACGT
TGCAGCGGTACACCACCGCGTGGTCGGCGCCGACCCGGAGGGCCACCGCT
TGGTGCT
back to top