CX671641

Overview
NameCX671641
Unique NameCX671641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.683e-39
Identity = 86/209 (41.15%), Postives = 121/209 (57.89%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNR-KDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            +QAVA RV  D AV++ C   GYQDTLYV++ RQFYR   + GTVDFI G +A V+Q   I  RK    Q N +TA  + K      GI +H+C + A  +L+A + ++ +YLGRPWK ++    + T +GD IQP GW EW G+    T  Y E+ N GPG+    RV W   ++  SA E  +FTV+ ++  ++W+    V    GL
Sbjct:  365 NQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.594e-37
Identity = 82/209 (39.23%), Postives = 112/209 (53.59%), Query Frame = -3
Query:  244 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASK-----FTVSQFIYGSSWLPSTGVAF 855
            HQAVALRV AD A+ Y C + G+QDTLYV S RQFYR+C I GT+DF+FG    V Q C +  R P   Q+  +TA  R+  N  + +          P L +    + +YLGRPWK YS+VV M + +     P G++ W G    +T  Y EY N GPG+    RV+W G +V+TS   A       F +       +W+  +GV +
Sbjct:  235 HQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPY 442          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 9.542e-37
Identity = 71/137 (51.82%), Postives = 94/137 (68.61%), Query Frame = -3
Query:  442 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGW 852
            QAVALR+  D  ++YRC +  YQDTLY +S RQFYR+C I GTVDFIFG AA V Q C I ARKP   Q N +TAQ+R++    +G S   C++ A+ DL   KG++ T+LGRPW+ +SRVV+M +++ D I   GW
Sbjct:  150 QAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.684e-33
Identity = 81/196 (41.33%), Postives = 110/196 (56.12%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            QAVALRV AD+A  + C ++G QDTLY H  R +Y++C I G+VDFIFGNA  + + C ++A   +A +   +TAQ R    ++TG S   C +          G+   YLGR W  +SRVV+  TYM + I PRGW  W       T++YG+Y  +G G+  G RV W   R +T   EA  F    FI GS W+
Sbjct:  201 QAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA---IADKLGAVTAQGRSSVLEDTGFSFVKCKV---------TGTGVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWI 381          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.973e-30
Identity = 72/196 (36.73%), Postives = 102/196 (52.04%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            +AVALRV AD A  Y C +  YQDTL   +   +++ C I G  DFI G+A+ + ++C +++  P      +ITAQ R    + +G +   C L          GS  T+LGRPW  YSRVV+  ++  + + P+GW +W      +T+YYGEY   GPG+    RV W       S  EA+ F    FI G  WL
Sbjct:  152 RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSP---NNGSITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWSKQ---LSDEEATVFLSKDFIGGKDWL 332          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.097e-28
Identity = 74/196 (37.76%), Postives = 100/196 (51.02%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            QAVALR+  D AV YR  V+G QDTL+  +   ++ +C I G VDFIFGNA  + Q C I++    A +   I A +R    ++TG S  +C +          G+   YLGR W  YSR VY   ++ D I P GW +W        + +GEY   G G+  G RV W   + +T   E   F   +FIYG  WL
Sbjct:  198 QAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHS---TAKRYGAIAAHHRDSETEDTGFSFVNCDI---------SGTGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPWS--KTLT-RDEVKPFLGREFIYGDQWL 378          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.804e-27
Identity = 76/203 (37.44%), Postives = 101/203 (49.75%), Query Frame = -3
Query:  250 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAI--YARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGV 852
            QAVALR+  D A  Y C   G QDTL     R F++EC I G++DFIFGN   + Q C I   A+   +    +ITAQ R+  ++ +G S  +C +          GS    LGR W  Y+ VV+  TYM   I P GW  W       T+ +GE+   GPG+    RV + G ++  S  EAS F    FI G  WL  T +
Sbjct:  200 QAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---------DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLF-GKQLTDS--EASSFIDVSFIDGDEWLRHTNI 390          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.527e-26
Identity = 68/170 (40.00%), Postives = 92/170 (54.12%), Query Frame = -3
Query:  346 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW-NGDFALDTLYYGEYMNSGPGSAVGHRVRW 852
            QAVA+RV AD    Y C  +G+QDTLY+H  +Q+ ++C I G+VDFIFGN+  +L+ C I+ +      +  ITAQ+RK   ++TG     C       +  +  S   YLGRPW  + RVV   TYM   I+  GW  W N +      +Y EY   GPGS    RV W
Sbjct:  121 QAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCV------ITGNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFY-EYRCFGPGSCSSERVPW 278          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.994e-26
Identity = 71/204 (34.80%), Postives = 104/204 (50.98%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQ--------KNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            QAVA+R+  D +    C   G QDTL+    R ++++C I G++DFIFGNA  + Q C I +   MA Q           +TA  R   ++N+G S  +C++          G+   +LGR W+ YSRVV++ T M D I P GW  +N      T++YGEY  SGPG+ +  R     Y    + T+ +    + FI G  WL
Sbjct:  200 QAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIIS---MANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTI---------GGTGHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRA---PYVQKLNETQVALLINTSFIDGDQWL 388          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.379e-25
Identity = 70/199 (35.18%), Postives = 97/199 (48.74%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNT---ITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            QAVAL+V  D A  Y C   G QDTL     R F++ C I G++DFIFGN   + + C +++      ++NT   ITA  +      TG    +C +          GS   +LGR W+ Y+RV++  TYM   +   GW +        T+YYGE+   GPG+    RV    Y  + S  EA+ FT   FI G  WL
Sbjct:  151 QAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHS----IAKENTIGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRVT---YAKLLSDVEAAPFTNISFIDGEEWL 333          
The following BLAST results are available for this feature:
BLAST of CX671641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME_BRACM2.683e-3941.15Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME_MEDSA5.594e-3739.23Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME56_ARATH9.542e-3751.82Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME53_ARATH1.684e-3341.33Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME11_ARATH2.973e-3036.73Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME62_ARATH8.097e-2837.76Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME15_ARATH1.804e-2737.44Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME31_ARATH1.527e-2640.00Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME8_ARATH1.994e-2634.80Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME14_ARATH8.379e-2535.18Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C08-F16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671641 ID=CX671641; Name=CX671641; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTAAAGACCGTCACAAATATTATTACTTATTACAACATCAAGACG
AAAAAAATGAAACCAGAAAATTATACAATTGCGAAAGAAATATTTAGAAT
TTAACCTCCCCGTGTGTGTGTGTGCATGCAGTAAGTAAAATTCCATTTGA
TCCTTCCAACACTCATGAGACCCACCTATATATAATAAGTATACGTACTA
AAAAGTTAAATTAAAATTCACTTTAAACCGAAAGCCCACCCAAGAAAGCC
ACCCCAGTCGACGGCAGCCACGACGACCCGTAGATAAACTGCGACACAGT
GAATTTACTTGCCTCCGTCGCCGACGTTATAACCCGGTAACCCGGCCACC
TCACCCGGTGCCCCACGGCCGAACCCGGGCCGGAGTTCATGTACTCGCCG
TAGTATAAAGTATCCAGTGCAAAGTCTCCATTCCATTCAAGCCAGCCTCT
GGGTTGGATGTGGTCACCCATGTACGTTAACATGTACACAACCCTCGAGT
AGAGCTTCCACGGCCGGCCTAGGTACGTGGGGATGCTGCCTTTCGAGGCC
TGAAGATCGGGGGCGGCGTAGAGGCTGCAGTCGTGGATTGAGATGCCCGT
GTTCTGATTAGGGTCTTTCCTGTTCTGCGCCGTGATGGTGTTCTTCTGCA
TGGCCATCGGCTTGCGAGCGTAGATGGCGCACTTCTGTAAGACCACGGCG
GCGTTCCCGAAGATGAAGTCCACGGTGCCGTAGATGTCGCACTCGCGGTA
GAACTGCCGGTTTGAGTGCACGTAGAGGGTGTCTTGGTAACCGATTACGT
TGCAGCGGTACACCACCGCGTGGTCGGCGCCGACCCGGAGGGCCACCGCT
TGGTGCT
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