CX671641

Overview
NameCX671641
Unique NameCX671641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24
Identity = 65/199 (32.66%), Postives = 95/199 (47.74%), Query Frame = -3
Query:  262 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQK-NTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLP 855
            +Q+VA  V AD    Y C      +TL+ +  R +Y EC I G++DFIFG A  +   C I+      ++   +ITA +R+   + TG       +Y   ++         YLGR    YSRV++  TY+   + P GW  W+   +   LY+GEY   GPG+    R  W   + +T   E   F    FI G+SWLP
Sbjct:  151 NQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGKVYGIDEV---------YLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWA--KDLTK-QEVESFLSIDFIDGTSWLP 337          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.695e-23
Identity = 66/196 (33.67%), Postives = 90/196 (45.92%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            QA+A+R+  D A  Y C   G+QDTL       F++ C I GT DFIFG  A +     ++A   +      I A NR+   +  G S   C +               YLGR W  + +VVY  T M   + P GW E        T++YGEYM +GPGS   H+ +   +       EAS+F    +I GS WL
Sbjct:  174 QALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHA---VGDGLRVIAAHNRQSTTEQNGYSFVHCKVTGV--------GTGIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFYGEYMCTGPGS---HKAKRVAHTQDIDNKEASQFLTLGYIKGSKWL 355          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 66/196 (33.67%), Postives = 90/196 (45.92%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            QA+A+R+ AD A  Y C   G+QDTL       F+++C I GT DFIFG  A +     ++A   +      ITAQ R+   +  G +   C +               YLGR W  + +VVY  T M   + P GW E        T++YGEY   GPGS +  RV    Y       E + F    +I GS+WL
Sbjct:  174 QALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA---VGDGLRVITAQGRQSATEQNGYTFVHCKVTGT--------GTGIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFGPGSHLEKRV---PYTQDIDKNEVTPFLTLGYIKGSTWL 355          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 62/197 (31.47%), Postives = 91/197 (46.19%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW-NGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            QAVA R+  D A    C   G QDTL   + R +++EC I G++DFIFGN   + + C +++   +A +  +I A  R  P + TG +   C +          G+ P Y+GR    YSR+VY  TY    +   GW +W +      T ++G Y   GPG+A    V W           A  F    F+ G  W+
Sbjct:  176 QAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IASRFGSIAAHGRTCPEEKTGFAFVGCRV---------TGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWAR---ALDYESAHPFIAKSFVNGRHWI 357          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.587e-21
Identity = 57/170 (33.53%), Postives = 80/170 (47.06%), Query Frame = -3
Query:  346 AVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQ--KNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRW 849
            AVA  +G D +  Y     G QDTL+    R ++  C I G VDFIFG    + Q C I              ITAQ R +P    G    +C +Y         G+   +LGRPW+ YSRV++  + + D + P GW  WN     + L + E+   G G+ +G RV+W
Sbjct:  144 AVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCLVY---------GTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKW 304          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.587e-21
Identity = 67/207 (32.37%), Postives = 92/207 (44.44%), Query Frame = -3
Query:  244 AVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYAR---KPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEAS--KFTVSQFIYGSSWLPSTGVAF 849
            AVA  +  D   +   +  G+QDTLY    R +Y+ C I G +DFIFG A  + + C +  R    P      TITAQ R  P    G    DC++          GS    LGR WK YSRV++  +   D+I P GW  W        + + E+  +G G+    RV W     +T A+E    +FT   FI    WL    + F
Sbjct:  147 AVAAMMLGDKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDCTV---------MGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPW-----LTKASEKDVLQFTNLTFIDEEGWLSRLPIKF 339          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.116e-20
Identity = 60/196 (30.61%), Postives = 92/196 (46.94%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            QA+++R+  + A  Y C   G+QDT+   +   F+++C + GT DFIFG+   +     ++    +      I A   K   + +G S   C       +  + G I  YLGR W  + +VVY  T M   + P GW E        T++YGEY  SGPGS   H+ +   +       EA++F    +I GS WL
Sbjct:  174 QALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHV---VGDGIRVIAAHAGKSAEEKSGYSFVHCK------VTGTGGGI--YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGS---HKAKRVPFTQDIDDKEANRFLSLGYIQGSKWL 355          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.361e-19
Identity = 57/170 (33.53%), Postives = 76/170 (44.71%), Query Frame = -3
Query:  346 AVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNT--ITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRW 849
            AVA  +G D +  Y     G QDTL+    R ++  C I G VDFI G+   + Q C I           T  ITAQ R + N   G    +C ++         G    YLGR W+ YSRV++  + + D + P GW EWN       L Y E+   G GS    R +W
Sbjct:  139 AVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINCLVH---------GFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKW 299          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.084e-19
Identity = 60/196 (30.61%), Postives = 91/196 (46.43%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            QA+++R+  + A  Y C   G+QDT+   +   F+++C + GT DFIFG+   +     ++    +      I A   K   + +G S   C       +  + G I  YLGR W  + +VVY  T M   + P GW E        T++YGEY  SGPGS   H+ +   +       EA+ F    +I GS WL
Sbjct:  174 QALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHV---VGDGIRVIAAHAGKSAEEKSGYSFVHCK------VTGTGGGI--YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGS---HKAKRVPFTQDIDDKEANCFLSLGYIQGSKWL 355          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.260e-19
Identity = 65/200 (32.50%), Postives = 93/200 (46.50%), Query Frame = -3
Query:  265 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKN---TITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALD-TLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWL 852
            QA+++R+  + A  Y C   GYQDT+   +   F+++C I GT DFIFG+        ++Y    + +  +    ITA   K   + +G S   C +               YLGR W  + +VVY  T M   + P GW E N +   D T++YGEY  +G GS    RV+   Y       EA  F    +I GSSWL
Sbjct:  151 QALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGR------SLYLGTQLNVVGDGIRVITAHAGKSAAEKSGYSFVHCKVTGT--------GTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQE-NREAGRDKTVFYGEYKCTGTGSHKEKRVK---YTQDIDDIEAKYFISLGYIQGSSWL 332          
The following BLAST results are available for this feature:
BLAST of CX671641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME67_ARATH9.264e-2432.66Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME49_ARATH2.695e-2333.67Probable pectinesterase 49 OS=Arabidopsis thaliana... [more]
PME50_ARATH3.892e-2233.67Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME68_ARATH3.295e-2131.47Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PME29_ARATH9.587e-2133.53Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PME10_ARATH9.587e-2132.37Putative pectinesterase 10 OS=Arabidopsis thaliana... [more]
PPME1_ARATH8.116e-2030.61Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PP... [more]
PME55_ARATH2.361e-1933.53Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]
PME48_ARATH3.084e-1930.61Probable pectinesterase 48 OS=Arabidopsis thaliana... [more]
PME63_ARATH5.260e-1932.50Putative pectinesterase 63 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C08-F16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671641 ID=CX671641; Name=CX671641; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTAAAGACCGTCACAAATATTATTACTTATTACAACATCAAGACG
AAAAAAATGAAACCAGAAAATTATACAATTGCGAAAGAAATATTTAGAAT
TTAACCTCCCCGTGTGTGTGTGTGCATGCAGTAAGTAAAATTCCATTTGA
TCCTTCCAACACTCATGAGACCCACCTATATATAATAAGTATACGTACTA
AAAAGTTAAATTAAAATTCACTTTAAACCGAAAGCCCACCCAAGAAAGCC
ACCCCAGTCGACGGCAGCCACGACGACCCGTAGATAAACTGCGACACAGT
GAATTTACTTGCCTCCGTCGCCGACGTTATAACCCGGTAACCCGGCCACC
TCACCCGGTGCCCCACGGCCGAACCCGGGCCGGAGTTCATGTACTCGCCG
TAGTATAAAGTATCCAGTGCAAAGTCTCCATTCCATTCAAGCCAGCCTCT
GGGTTGGATGTGGTCACCCATGTACGTTAACATGTACACAACCCTCGAGT
AGAGCTTCCACGGCCGGCCTAGGTACGTGGGGATGCTGCCTTTCGAGGCC
TGAAGATCGGGGGCGGCGTAGAGGCTGCAGTCGTGGATTGAGATGCCCGT
GTTCTGATTAGGGTCTTTCCTGTTCTGCGCCGTGATGGTGTTCTTCTGCA
TGGCCATCGGCTTGCGAGCGTAGATGGCGCACTTCTGTAAGACCACGGCG
GCGTTCCCGAAGATGAAGTCCACGGTGCCGTAGATGTCGCACTCGCGGTA
GAACTGCCGGTTTGAGTGCACGTAGAGGGTGTCTTGGTAACCGATTACGT
TGCAGCGGTACACCACCGCGTGGTCGGCGCCGACCCGGAGGGCCACCGCT
TGGTGCT
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