CX671609

Overview
NameCX671609
Unique NameCX671609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.645e-20
Identity = 61/210 (29.05%), Postives = 97/210 (46.19%), Query Frame = -1
Query:  274 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG--KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV------------------PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 843
            +  G++EA +   + + + LS Q+L+DC +     GC GG    AF  +  N GL +E+ YP+ G  K   C          + D + +    E ++   +    P++V   +    + YK GV  +T     P  V+H+V+ VG+G  + V                  P+W++KNSWG  WG  GYF++  G N CGI     YP+ A
Sbjct:  157 AAAGNIEALWAIKYRQSVELSVQELLDCGRC--GDGCRGGFVWDAFITVLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLP-DNEQKIAWYLATQGPITVTINM-KLLKLYKKGVIEATPTSCDPFLVDHSVLLVGFGKSESVADRRAGAAGAQPQSRRSIPFWILKNSWGTKWGXGGYFRLYRGNNTCGI---TKYPLTA 359          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.645e-20
Identity = 61/171 (35.67%), Postives = 90/171 (52.63%), Query Frame = -1
Query:  301 GKGIS-LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNG-GLDTEEAYPYTGKDGVCK-FSSENVGVQVLD-SVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIA 801
            GK +  LS QQ++DC+  FNN GC GG P  A  ++      L  +  YP+   +G C+ F     GV V D S     G EDE+  A+    P+ V  + +  ++ Y  G+     C +   + NHAV+  G+      PYW+++NSWG +WG  GY  ++MG N+CGIA
Sbjct:  140 GKSLDYLSVQQVIDCS--FNNSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMS-WQDYLGGIIQH-HCSSG--EANHAVLITGFDRTGNTPYWMVRNSWGSSWGVEGYAHVKMGGNVCGIA 304          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 61/199 (30.65%), Postives = 98/199 (49.25%), Query Frame = -1
Query:  274 HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTG--KDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGV----------------PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 813
            HQ F   + +S Q+L+DC +  N  GCNGG    A+  +  N GL +E+ YP+ G  K   C  + +   V  +    +    E  + H + +  P++V   +    + Y+ GV  +T     P  V+H+V+ VG+G + +G+                PYW++KNSWG +WG+ GYF++  G N CG+     YP  A
Sbjct:  168 HQQF---VDVSVQELLDCERCGN--GCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRC-LAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINM-KLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRGNNTCGV---TKYPFTA 356          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.765e-19
Identity = 59/211 (27.96%), Postives = 99/211 (46.92%), Query Frame = -1
Query:  274 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVG-VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV---EDGV-----------------PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 843
            +  G++E  +  +F   + +S Q+L+DC +     GC+GG    AF  +  N GL +E+ YP+ GK    +   +    V  +    +    E  +   +    P++V   +    + Y+ GV  +T     P  V+H+V+ VG+G    E+G+                 PYW++KNSWG  WG+ GYF++  G N CGI     +P+ A
Sbjct:  157 AAAGNIETLWRISFWDFVDVSVQELLDCGRC--GDGCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKP-LQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGI---TKFPLTA 361          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19
Identity = 67/222 (30.18%), Postives = 101/222 (45.50%), Query Frame = -1
Query:  280 GSLEAAY-HQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE-DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-------------------------------EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPV 834
            G+ E  Y H      IS SEQQ+VDC+    N GC+GG P  AF Y+  N G+   + YPY G +    F   N    +L  V+     + +EL  A+  V PV++A    + F  Y  GV+     G    ++NH+V+ VGYG                                +D + YW+++NSWG NWG+ GY +++  K      CG+ +   +P+
Sbjct:  294 GNFEYLYVHTRHEMPISFSEQQMVDCST--ENYGCDGGNPFYAFLYM-INNGVCLGDEYPYKGHE---DFFCLNYRCSLLGRVHFIGDVKPNELIMALNYVGPVTIAVGASEDFVLYSGGVFD----GECNPELNHSVLLVGYGQVKKSLAFEDSHSNVDSNLIKKYKENIKGDDDDDIIYYWIVRNSWGPNWGEGGYIRIKRNKAGDDGFCGVGSDVFFPI 505          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -1
Query:  280 SEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK------FSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPV 783
            SEQ+L+DC +   + GCNGG P  A + +   G +     YPY G    C+      ++++  GV+ +   N     E  L +++   +PVSV  E     F+ Y+ G++    CGN    V+HAV AVGYG      Y LIKNSWG  WG++GY +++ G      +CG+ T + YPV
Sbjct:  182 SEQELLDCDR--RSYGCNGGYPWSALQLVAQYG-IHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYN-----EGALLYSIAN-QPVSVVLEAAGKDFQLYRGGIFVGP-CGNK---VDHAVAAVGYGPN----YILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 343          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 64/218 (29.36%), Postives = 106/218 (48.62%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-------------------------EDGVPYWLIKNSWGENWGDHGYFKMEMGKN----MCGIATCASYPVV 843
            ++ G++E+ + +     +S SEQ++VDC++  +N GC+GG P  +F Y+  N  L   + Y Y  KD +   +        L S+      E++L  A+  V P+SV   V + F  Y  GVY+ T C     ++NH+V+ VGYG                          ++ + YW+IKNSW + WG++G+ ++   KN     CGI     YP++
Sbjct:  361 ASVGNIESVFAKKNKNILSFSEQEVVDCSK--DNFGCDGGHPFYSFLYVLQNE-LCLGDEYKYKAKDDMFCLNYRCKRKVSLSSIGAV--KENQLILALNEVGPLSVNVGVNNDFVAYSEGVYNGT-CSE---ELNHSVLLVGYGQVEKTKLNYNNKIQTYNTKENSNQPDDNIIYYWIIKNSWSKKWGENGFMRLSRNKNGDNVFCGIGEEVFYPIL 569          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 62/174 (35.63%), Postives = 86/174 (49.43%), Query Frame = -1
Query:  304 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY----TGKDGVC--KFSSENVGVQVLDSVNITLGAED--ELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 798
            K +  S Q +V C     +  CNGG     ++++   G   T+E  PY    T   G C  K +  +  V +  + +      D   +  A+    P+ VAF V   F +Y+SGVY  T      M+  HAV  VGYG +D GV YW+IKNSWG +WG+ GYF+M  G N C I
Sbjct:  122 KPVKYSPQYVVSCDHG--DMACNGGWLPNVWKFLTKTG-TTTDECVPYKSGSTTLRGTCPTKCADGSSKVHLATATSYKDYGLDIPAMMKALSTSGPLQVAFLVHSDFMYYESGVYQHTY---GYMEGGHAVEMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRMIRGINDCSI 289          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 59/175 (33.71%), Postives = 85/175 (48.57%), Query Frame = -1
Query:  304 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY----TGKDGVCKFSSENVG-----VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 798
            K +  S Q +V C +   +  C+GG     + ++   G   T+E  PY    TG  G C     +        +   +V+  L A   +  A+    P+  AF V   F +Y+SGVY  T      ++  HAV  VGYG +D GV YW+IKNSWG +WG+ GYF++    N CGI
Sbjct:  121 KAVKYSPQYVVSCDRG--DMACDGGWLPSVWRFLTKTG-TTTDECVPYQSGSTGARGTCPTKCADGSDLPHLYKATKAVDYGLDAP-AIMKALATGGPLQTAFTVYSDFMYYESGVYQHTY---GRVEGGHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIRMTNECGI 288          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 58/182 (31.87%), Postives = 87/182 (47.80%), Query Frame = -1
Query:  304 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF-SSENVGVQVLDSVNITLGAEDELQHAVGLVR-PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 843
            S   ++E+ Y       + LSEQ+LVDCA   +  GC G        YI+ NG ++ E++YPY  ++G C+  +++  G++ L  +    G +     A       V +    +D FR Y       +  G       HA+  VGYG + GV YW+I+NSW   WGD GY      KN+ GI
Sbjct:  138 SGVATVESNYLSYDNVSLDLSEQELVDCA---SQHGCGGDTVLNGLRYIQKNGVVE-EQSYPYKAREGRCQRPNAKRYGIKDLCQIYPPNGDKIRTYLATKQAALSVIIGIRDLDSFRHYDGRTILQSDNGGKRNF--HAINIVGYGSKQGVRYWIIRNSWDTTWGDKGYGYFVADKNLMGI 313          
The following BLAST results are available for this feature:
BLAST of CX671609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
CATW_FELCA4.645e-2029.05Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CATO_MOUSE4.645e-2035.67Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
CATW_MOUSE1.352e-1930.65Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATW_HUMAN1.765e-1927.96Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CYSP_PLAVN5.136e-1930.18Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
PAPA1_CARPA6.708e-1935.20Papain OS=Carica papaya PE=1 SV=1[more]
CYSP_PLAFA5.678e-1829.36Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CATB2_GIALA9.686e-1835.63Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
CATB3_GIALA2.158e-1733.71Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
PEPT1_PSOOV3.681e-1731.87Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B04-D8-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671609 ID=CX671609; Name=CX671609; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTGCATTGACAAAATATATATAACATCGNTTGGTG
TCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAATTTATTTT
GAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGACATTAATC
TCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCATTCTTGAG
TGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCCAGATCCA
ACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATGCACAAGT
TGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAGCCATGAT
CGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGGAACACCA
TCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACATCCATGGG
AGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAAAATCGGA
ATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAGACCAACT
GCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTGAGTCCAG
GACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCATCTTTTC
CGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTACTTGATG
TATTCAAAGGCTTGGGATGGCAACCCACCATTGCATCCCTGGTTGTTGAA
AGCTTGGGCACAGTCTACAAGCTGCTGTTCTGACAAAGAGATACCCTTTC
CAAAGGCCTGGTGGTAAGCAGCCTCAAGAGATCCAGTCGTGCT
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