CX671609

Overview
NameCX671609
Unique NameCX671609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATB_BOVIN (Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5)

HSP 1 Score: 83.1889 bits (204), Expect = 2.020e-15
Identity = 58/198 (29.29%), Postives = 84/198 (42.42%), Query Frame = -1
Query:  304 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK----YNGGLDTEEAY------------------PYTGKDGVCKFSS-------------ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 792
            + +S + ++ C       GCNGG PS A+ +       +GGL                        P TG+    K S              ++ G       N     E E+   +    PV  AF V   F  YKSGVY      +  +   HA+  +G+GVE+G PYWL+ NSW  +WGD+G+FK+  G++ CGI
Sbjct:  131 VEVSAEDMLTCCGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKTCEPGYSPSYKEDKHFGCSSYSVAN----NEKEIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHV---SGEIMGGHAIRILGWGVENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGI 321          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.445e-15
Identity = 64/201 (31.84%), Postives = 86/201 (42.79%), Query Frame = -1
Query:  304 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK----YNGGLDTEEA--YPYT------------------GKDGVCKFSSEN--------------VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 792
            + +S + L+ C       GCNGG PS A+ +       +GG+        PYT                  G    C  S E                   V +SV        E+   +    PV  AF V   F  YKSGVY   + G+  M   HA+  +G+GVE+GVPYWL  NSW  +WGD+G+FK+  G+N CGI
Sbjct:  131 VEVSAEDLLTCCGIQCGDGCNGGYPSGAWSFWTKKGLVSGGVYNSHVGCLPYTIPPCEHHVNGSRPPCTGEGDTPRCNKSCEAGYSPSYKEDKHFGYTSYSVSNSVK-------EIMAEIYKNGPVEGAFTVFSDFLTYKSGVYKH-EAGD--MMGGHAIRILGWGVENGVPYWLAANSWNLDWGDNGFFKILRGENHCGI 321          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15
Identity = 56/199 (28.14%), Postives = 85/199 (42.71%), Query Frame = -1
Query:  304 GKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEY-----IKYNGGLDTE---EAYPYTGKDGVCKFSSENVGVQVL-------------------------DSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 801
            G+   LS   L+ C +   + GC GG P  A++Y     I   G  +     + YP+   +   K      G ++                          +S N+    E  +Q  + +  PV  AF+V + F  YKSG+Y         +   HA+  +G+GVE   PYWLI NSW E+WG+ G F+M  G++ C I
Sbjct:  138 GQSAELSALDLISCCKDCGD-GCQGGFPGVAWDYWVKRGIVTGGSKENHTGCQPYPFPKCEHHTKGKYPACGTKIYKTPQCKQTCQKGYKTPYEQDKHYGDESYNVQ-NNEKVIQRDIMMYGPVEAAFDVYEDFLNYKSGIYRHV---TGSIVGGHAIRIIGWGVEKRTPYWLIANSWNEDWGEKGLFRMVRGRDECSI 331          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CPR4_CAEEL (Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.002e-14
Identity = 59/196 (30.10%), Postives = 89/196 (45.41%), Query Frame = -1
Query:  304 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNG-------------------------GLDTEEAYPYTGKDG---VCKFSSENVGVQV-----LDSVNITLGAE-DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVN-HAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 786
            LS + ++ C       GC GG P  A++Y+  +G                         G  T  + P  G D    V K +++N  V         S    +G +  ++Q  +    PV  AF V + F  YK+GVY  T    T  ++  HA+  +G+G ++G PYWL+ NSW  NWG++GYF++  G N CGI
Sbjct:  134 LSAEDVLSCCSNCG-YGCEGGYPINAWKYLVKSGFCTGGSYEAQFGCKPYSLAPCGETVGNVTWPSCPDDGYDTPACVNKCTNKNYNVAYTADKHFGSTAYAVGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVYVHT----TGQELGGHAIRILGWGTDNGTPYWLVANSWNVNWGENGYFRIIRGTNECGI 324          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: YCF2E_CAEEL (Uncharacterized peptidase C1-like protein F26E4.3 OS=Caenorhabditis elegans GN=F26E4.3 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14
Identity = 56/190 (29.47%), Postives = 87/190 (45.79%), Query Frame = -1
Query:  304 SLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPY------------------TGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVY-----SSTKCGNTPMDVNHAVVAVGYGVEDG----VPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 789
            +LS QQL+ C Q    +GC GG   +A+ YI+  G +  +  YPY                  T + G+ C   S++     +         E+++Q  +    PV   F V + F  Y  GVY     ++ K  ++  +  H+V  +G+GV+      + YWL  NSWG  WG+ GYFK+  G+N C I
Sbjct:  234 TLSSQQLLSCNQ-HRQKGCEGGYLDRAWWYIRKLGVVG-DHCYPYVSGQSREPGHCLIPKRDYTNRQGLRCPSGSQDSTAFKMTPPYKVSSREEDIQTELMTNGPVQATFVVHEDFFMYAGGVYQHSDLAAQKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRGENHCEI 421          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14
Identity = 59/198 (29.80%), Postives = 86/198 (43.43%), Query Frame = -1
Query:  304 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK----YNGGLDTEEAY------------------PYTGKDGVCKFSS-------------ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 792
            + +S + ++ C       GCNGG PS A+ +       +GGL                        P TG+    K S              ++ G     S +I+   E E+   +    PV  AF V   F  YKSGVY         +   HA+  +G+GVE+G PYWL+ NSW  +WGD+G+FK+  G++ CGI
Sbjct:  131 VEVSAEDMLTCCGDECGDGCNGGFPSGAWNFWTKKGLVSGGLYDSHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYTPSYKEDKHFGCS---SYSISRN-EKEIMAEIYKNGPVEGAFTVYSDFLQYKSGVYQHV---TGDLMGGHAIRILGWGVENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGI 321          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATB_CHICK (Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14
Identity = 61/195 (31.28%), Postives = 83/195 (42.56%), Query Frame = -1
Query:  304 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIK----YNGGLDTEE----AY--------------PYTGKDGVCKFSSENVGVQVLDSVN-------ITLG---AEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 792
            + +S + L+ C       GCNGG PS A+ Y       +GGL        AY              P TG+ G     S +       S          + G   +E E+   +    PV  AF V + F  YKSGVY             HA+  +G+GVE+G PYWL  NSW  +WG  G+FK+  G++ CGI
Sbjct:  131 VEVSAEDLLSCCGFECGMGCNGGYPSGAWRYWTERGLVSGGLYDSHVGCRAYTIPPCEHHVNGSRPPCTGEGGETPRCSRHCEPGYSPSYKEDKHYGITSYGVPRSEKEIMAEIYKNGPVEGAFIVYEDFLMYKSGVYQHVSGEQVG---GHAIRILGWGVENGTPYWLAANSWNTDWGITGFFKILRGEDHCGI 322          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP1_OSTOS (Cathepsin B-like cysteine proteinase 1 OS=Ostertagia ostertagi GN=CP-1 PE=3 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14
Identity = 56/195 (28.72%), Postives = 87/195 (44.62%), Query Frame = -1
Query:  307 KGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEY-----IKYNGGLDTE-EAYPYT----GKDGVCKFSSENVGVQVLDSVN--ITLGAED------------ELQHAVGLVR-------PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCG 798
            K + +S Q +V C   +   GC GG P  AF +     +   G  +T+    PY     G  G   +  E VG+           LG               +L+++V  ++       PV   + V + F  Y+SG+Y       T +   HAV  +G+G E G PYW++ NSW ++WG++G+F+M  G N CG
Sbjct:  140 KQVLISAQDVVSCC-TWCGDGCEGGWPISAFRFHADEGVVTGGDYNTKGSCRPYEIHPCGHHGNETYYGECVGMADTPRCKRRCLLGYPKSYPSDRYYKKAYQLKNSVKAIQKDIMKNGPVVATYTVYEDFAHYRSGIYKHKAGRKTGL---HAVKVIGWGEEKGTPYWIVANSWHDDWGENGFFRMHRGSNDCG 330          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14
Identity = 56/200 (28.00%), Postives = 88/200 (44.00%), Query Frame = -1
Query:  304 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-------CKFSSENVGVQ----------------VLDSVNITL-----------GAEDE---LQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 792
            ++LS   L+ C ++    GCNGG P  A+ Y   +G +       YT  +G        C+  S+                     V D  + T            G +D+   +Q  +    P+ +AFEV + F  Y  GVY  T      +   HAV  +G+G++DG+PYW + NSW  +WG+ G+F++  G + CGI
Sbjct:  156 VTLSADDLLSCCKSCGF-GCNGGDPLAAWRYWVKDGIVTGSN---YTANNGCKPYPFPPCEHHSKKTHFDPCPHDLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFEVYEDFLNYDGGVYVHT---GGKLGGGHAVKLIGWGIDDGIPYWTVANSWNTDWGEDGFFRILRGVDECGI 348          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CPR3_CAEEL (Cathepsin B-like cysteine proteinase 3 OS=Caenorhabditis elegans GN=cpr-3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = -1
Query:  304 ELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 564
            E+Q  +    PV  +++V + F  YKSGVY  T   +  +   HAV  +G+GVE+GV YWLI NSWG ++G+ G+FK+  G N C I
Sbjct:  244 EIQTEIYHYGPVEASYKVYEDFYHYKSGVYHYT---SGKLVGGHAVKIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNECQI 327          
The following BLAST results are available for this feature:
BLAST of CX671609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
CATB_BOVIN2.020e-1529.29Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5[more]
CATB_MOUSE3.445e-1531.84Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CYSP_SCHJA7.674e-1528.14Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CPR4_CAEEL1.002e-1430.10Cathepsin B-like cysteine proteinase 4 OS=Caenorha... [more]
YCF2E_CAEEL2.916e-1429.47Uncharacterized peptidase C1-like protein F26E4.3 ... [more]
CATB_PIG2.916e-1429.80Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CATB_CHICK2.916e-1431.28Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1[more]
CYSP1_OSTOS3.809e-1428.72Cathepsin B-like cysteine proteinase 1 OS=Ostertag... [more]
CPR6_CAEEL8.485e-1428.00Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]
CPR3_CAEEL8.485e-1443.68Cathepsin B-like cysteine proteinase 3 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B04-D8-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671609 ID=CX671609; Name=CX671609; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTGCATTGACAAAATATATATAACATCGNTTGGTG
TCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAATTTATTTT
GAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGACATTAATC
TCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCATTCTTGAG
TGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCCAGATCCA
ACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATGCACAAGT
TGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAGCCATGAT
CGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGGAACACCA
TCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACATCCATGGG
AGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAAAATCGGA
ATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAGACCAACT
GCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTGAGTCCAG
GACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCATCTTTTC
CGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTACTTGATG
TATTCAAAGGCTTGGGATGGCAACCCACCATTGCATCCCTGGTTGTTGAA
AGCTTGGGCACAGTCTACAAGCTGCTGTTCTGACAAAGAGATACCCTTTC
CAAAGGCCTGGTGGTAAGCAGCCTCAAGAGATCCAGTCGTGCT
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